RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 BECN2A8MW95 431 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 O00370 1275 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 SCAMP3O14828 347 aaKnown RBP9.37□□□□□ -0.91
DDX39B-216ENST00000462421 MAP3K13O43283 966 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 RHOBTB1O94844 696 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 KAT7O95251 611 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 EGFP01133 1207 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 ZDHHC11BP0C7U3 371 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 CCDC172P0C7W6 258 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 GBP1P32455 592 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 TNFRSF4P43489 277 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 DGKGP49619 791 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 RGS7P49802 495 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 DGKEP52429 567 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 SATB1Q01826 763 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 MTA1Q13330 715 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 CCINQ13939 588 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 C2orf27AQ580R0 203 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 LY6G5CQ5SRR4 150 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 C10orf76Q5T2E6 689 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 LAIR1Q6GTX8 287 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 FSTL4Q6MZW2 842 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 TXNDC11Q6PKC3 985 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 TSSK4Q6SA08 328 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 CLEC17AQ6ZS10 378 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 Q6ZS52 159 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 TOGARAM2Q6ZUX3 1019 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 SND1Q7KZF4 910 aaKnown RBP eCLIP9.37□□□□□ -0.91
DDX39B-216ENST00000462421 GPRIN1Q7Z2K8 1008 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 BBS7Q8IWZ6 715 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 KCNV2Q8TDN2 545 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 KCTD13Q8WZ19 329 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 SERPINB11Q96P15 392 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 LRRC3BQ96PB8 259 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 SPAG5Q96R06 1193 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 LINC00597Q9H2U6 94 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.37□□□□□ -0.91
DDX39B-216ENST00000462421 HBS1LQ9Y450 684 aaKnown RBP9.37□□□□□ -0.91
DDX39B-216ENST00000462421 NFE2L3Q9Y4A8 694 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 DAAM1Q9Y4D1 1078 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 PAXBP1Q9Y5B6 917 aa9.37□□□□□ -0.91
DDX39B-216ENST00000462421 MYO10Q9HD67 2058 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 NUP210Q8TEM1 1887 aaPredicted RBP9.36□□□□□ -0.91
DDX39B-216ENST00000462421 ZDBF2Q9HCK1 2354 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 NPC1O15118 1278 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 AXIN1O15169 862 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 HOXC11O43248 304 aaPredicted RBP9.36□□□□□ -0.91
DDX39B-216ENST00000462421 SYNCRIPO60506 623 aaKnown RBP9.36□□□□□ -0.91
DDX39B-216ENST00000462421 RPP40O75818 363 aaKnown RBP9.36□□□□□ -0.91
DDX39B-216ENST00000462421 PAPSS2O95340 614 aaPredicted RBP9.36□□□□□ -0.91
DDX39B-216ENST00000462421 NCAM1P13591 858 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 TYRP14679 529 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 BMP6P22004 513 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 MCCD1P59942 119 aaPredicted RBP9.36□□□□□ -0.91
DDX39B-216ENST00000462421 MYL5Q02045 173 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 DMC1Q14565 340 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 MEA1Q16626 185 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 MPPE1Q53F39 396 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 HSP90AA4PQ58FG1 418 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 TCP11X2Q5H9J9 407 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 HTR3DQ70Z44 454 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 SYT13Q7L8C5 426 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 CACNA2D4Q7Z3S7 1137 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 DENND1CQ8IV53 801 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 ARHGEF19Q8IW93 802 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 CHPFQ8IZ52 775 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 ADGRG2Q8IZP9 1017 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 ZNF276Q8N554 614 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 ZNF513Q8N8E2 541 aaPredicted RBP9.36□□□□□ -0.91
DDX39B-216ENST00000462421 NAT16Q8N8M0 369 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 ENOX1Q8TC92 643 aaKnown RBP9.36□□□□□ -0.91
DDX39B-216ENST00000462421 BHMTQ93088 406 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 CHFRQ96EP1 664 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 LSM14BQ9BX40 385 aaKnown RBP9.36□□□□□ -0.91
DDX39B-216ENST00000462421 KLF16Q9BXK1 252 aaPredicted RBP9.36□□□□□ -0.91
DDX39B-216ENST00000462421 FAM204AQ9H8W3 233 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 LMBRD1Q9NUN5 540 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 TMEM51Q9NW97 253 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 TJP2Q9UDY2 1190 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 NUDT5Q9UKK9 219 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 USP3Q9Y6I4 520 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 KMT2EQ8IZD2 1858 aa9.36□□□□□ -0.91
DDX39B-216ENST00000462421 CCDC163A0A0D9SF12 145 aa9.35□□□□□ -0.91
DDX39B-216ENST00000462421 CHURC1-FNTBB4DL54 471 aa9.35□□□□□ -0.91
DDX39B-216ENST00000462421 HHLA1C9JL84 531 aa9.35□□□□□ -0.91
DDX39B-216ENST00000462421 MDM4O15151 490 aa9.35□□□□□ -0.91
DDX39B-216ENST00000462421 MOCS3O95396 460 aa9.35□□□□□ -0.91
DDX39B-216ENST00000462421 KLF8O95600 359 aaPredicted RBP9.35□□□□□ -0.91
DDX39B-216ENST00000462421 LATS1O95835 1130 aa9.35□□□□□ -0.91
DDX39B-216ENST00000462421 TBX18O95935 607 aa9.35□□□□□ -0.91
DDX39B-216ENST00000462421 LTFP02788 710 aa9.35□□□□□ -0.91
DDX39B-216ENST00000462421 SLC2A3P11169 496 aa9.35□□□□□ -0.91
DDX39B-216ENST00000462421 ABCB4P21439 1286 aa9.35□□□□□ -0.91
DDX39B-216ENST00000462421 TIE1P35590 1138 aa9.35□□□□□ -0.91
DDX39B-216ENST00000462421 DPP6P42658 865 aa9.35□□□□□ -0.91
DDX39B-216ENST00000462421 FNTBP49356 437 aa9.35□□□□□ -0.91
DDX39B-216ENST00000462421 TBX4P57082 545 aa9.35□□□□□ -0.91
DDX39B-216ENST00000462421 CDK17Q00537 523 aa9.35□□□□□ -0.91
DDX39B-216ENST00000462421 LMNB2Q03252 620 aa9.35□□□□□ -0.91
DDX39B-216ENST00000462421 RAB41Q5JT25 222 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms