RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 SF3B1O75533 1304 aaKnown RBP eCLIP6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 PTPRQQ9UMZ3 2332 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 ARHGEF37A1IGU5 675 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 FRMD3A2A2Y4 597 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 ERICH4A6NGS2 130 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 KIF2AO00139 706 aaPredicted RBP6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 PES1O00541 588 aaKnown RBP6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 ACKR2O00590 384 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 N4BP3O15049 544 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 ATP8B1O43520 1251 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 OPHN1O60890 802 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 MOSPD3O75425 235 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 SMC2O95347 1197 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 WISP1O95388 367 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 APBB3O95704 486 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 RPN1P04843 607 aaKnown RBP6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 FTH1P19P0C7X4 201 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 CD59P13987 128 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 ARF4P18085 180 aaPredicted RBP6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 ITPKBP27987 946 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 NMT1P30419 496 aaKnown RBP6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 AXLP30530 894 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 ELF1P32519 619 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 MATR3P43243 847 aaKnown RBP eCLIP6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 MAGEA8P43361 318 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 LIG4P49917 911 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 ATXN3P54252 364 aaPredicted RBP6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 WDR4P57081 412 aaKnown RBP6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 FCHO2Q0JRZ9 810 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 ALCAMQ13740 583 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 MYBPC2Q14324 1141 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 TRIP4Q15650 581 aaPredicted RBP6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 CAMK4Q16566 473 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 HIF1AQ16665 826 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 FAM187BQ17R55 369 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 MAP9Q49MG5 647 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 ZC2HC1CQ53FD0 456 aaPredicted RBP6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 FAM26FQ5R3K3 315 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 ATF7IP2Q5U623 682 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 NOTUMQ6P988 496 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 ZNF720Q7Z2F6 126 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 SRLQ86TD4 932 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 SLCO6A1Q86UG4 719 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 C11orf74Q86VG3 221 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 SYCP3Q8IZU3 236 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 TMEM161BQ8NDZ6 487 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 GSTCDQ8NEC7 633 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 RHBDD1Q8TEB9 315 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 HPS3Q969F9 1004 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 SMARCE1Q969G3 411 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 CCDC51Q96ER9 411 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 ZFYVE19Q96K21 471 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 ZNF512Q96ME7 567 aaPredicted RBP6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 CAMK1GQ96NX5 476 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 LRRC3BQ96PB8 259 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 TCHPQ9BT92 498 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 RSRP1Q9BUV0 290 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 GTPBP2Q9BX10 602 aaKnown RBP6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 EIF2AQ9BY44 585 aaKnown RBP6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 TRIM6Q9C030 488 aaPredicted RBP6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 GPR88Q9GZN0 384 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 NPHS2Q9NP85 383 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 OLFML3Q9NRN5 406 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 TMEM74BQ9NUR3 256 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 RMND1Q9NWS8 449 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 ETAA1Q9NY74 926 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 TBX20Q9UMR3 447 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 EXOC7Q9UPT5 735 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 USP20Q9Y2K6 914 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 GIT1Q9Y2X7 761 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 CDY1Q9Y6F8 540 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 CEP192Q8TEP8 1941 aa6.38□□□□□ -1.39
SMARCC1-204ENST00000462198 MGAQ8IWI9 3026 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 ANKRD17O75179 2603 aaKnown RBP6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 DOPEY2Q9Y3R5 2298 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 A0A1B0GUA9 196 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 PRRG1O14668 218 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 HNRNPDLO14979 420 aaKnown RBP6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 KLRC4O43908 158 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 SH3BP5O60239 455 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 PRPF6O94906 941 aaKnown RBP6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 NPTXRO95502 500 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 MYL4P12829 197 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 BCKDHBP21953 392 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 AKAP5P24588 427 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 PTGIRP43119 386 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 ZNF75DP51815 510 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 CASP5P51878 434 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 RWDD2BP57060 319 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 GTF2BQ00403 316 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 TNK2Q07912 1038 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 ADCY2Q08462 1091 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 GRSF1Q12849 480 aaKnown RBP eCLIP6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 TEAD2Q15562 447 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 ZNF568Q3ZCX4 644 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 ARHGAP29Q52LW3 1261 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 TMEM196Q5HYL7 178 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 NT5DC1Q5TFE4 455 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 IQCEQ6IPM2 695 aa6.37□□□□□ -1.39
SMARCC1-204ENST00000462198 FSTL4Q6MZW2 842 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms