RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 FAM124BQ9H5Z6 455 aaPredicted RBP16.38■□□□□ 0.21
SF3A3-203ENST00000461869 VRTNQ9H8Y1 702 aa16.38■□□□□ 0.21
SF3A3-203ENST00000461869 NHEJ1Q9H9Q4 299 aaPredicted RBP16.38■□□□□ 0.21
SF3A3-203ENST00000461869 KCND1Q9NSA2 647 aa16.38■□□□□ 0.21
SF3A3-203ENST00000461869 WNT6Q9Y6F9 365 aa16.38■□□□□ 0.21
SF3A3-203ENST00000461869 TRAV19A0A0A6YYK7 116 aa16.37■□□□□ 0.21
SF3A3-203ENST00000461869 BCLAF3A2AJT9 711 aaKnown RBP16.37■□□□□ 0.21
SF3A3-203ENST00000461869 GOLGA6L9A6NEM1 432 aa16.37■□□□□ 0.21
SF3A3-203ENST00000461869 C4orf47A7E2U8 309 aa16.37■□□□□ 0.21
SF3A3-203ENST00000461869 HUS1O60921 280 aa16.37■□□□□ 0.21
SF3A3-203ENST00000461869 GFPT2O94808 682 aa16.37■□□□□ 0.21
SF3A3-203ENST00000461869 ITGB3P05106 788 aa16.37■□□□□ 0.21
SF3A3-203ENST00000461869 KRT19P08727 400 aa16.37■□□□□ 0.21
SF3A3-203ENST00000461869 CCDC175P0C221 793 aa16.37■□□□□ 0.21
SF3A3-203ENST00000461869 USP17L7P0C7H9 530 aa16.37■□□□□ 0.21
SF3A3-203ENST00000461869 ACAT1P24752 427 aaKnown RBP16.37■□□□□ 0.21
SF3A3-203ENST00000461869 POLR2BP30876 1174 aaKnown RBP16.37■□□□□ 0.21
SF3A3-203ENST00000461869 NOVA1P51513 510 aaKnown RBP16.37■□□□□ 0.21
SF3A3-203ENST00000461869 DGKEP52429 567 aa16.37■□□□□ 0.21
SF3A3-203ENST00000461869 ZNF77Q15935 545 aa16.37■□□□□ 0.21
SF3A3-203ENST00000461869 E4F1Q66K89 784 aaPredicted RBP16.37■□□□□ 0.21
SF3A3-203ENST00000461869 TXLNBQ8N3L3 684 aa16.37■□□□□ 0.21
SF3A3-203ENST00000461869 LRRC52Q8N7C0 313 aa16.37■□□□□ 0.21
SF3A3-203ENST00000461869 TRMT2BQ96GJ1 504 aaKnown RBP16.37■□□□□ 0.21
SF3A3-203ENST00000461869 MYRFLQ96LU7 910 aa16.37■□□□□ 0.21
SF3A3-203ENST00000461869 SLC22A12Q96S37 553 aa16.37■□□□□ 0.21
SF3A3-203ENST00000461869 CHP1Q99653 195 aa16.37■□□□□ 0.21
SF3A3-203ENST00000461869 ABCB6Q9NP58 842 aa16.37■□□□□ 0.21
SF3A3-203ENST00000461869 LUC7LQ9NQ29 371 aaKnown RBP16.37■□□□□ 0.21
SF3A3-203ENST00000461869 DDX43Q9NXZ2 648 aaKnown RBP16.37■□□□□ 0.21
SF3A3-203ENST00000461869 ARHGAP20Q9P2F6 1191 aa16.37■□□□□ 0.21
SF3A3-203ENST00000461869 AJAP1Q9UKB5 411 aaPredicted RBP16.37■□□□□ 0.21
SF3A3-203ENST00000461869 AGAP1Q9UPQ3 857 aa16.37■□□□□ 0.21
SF3A3-203ENST00000461869 INVSQ9Y283 1065 aa16.37■□□□□ 0.21
SF3A3-203ENST00000461869 MAP1BP46821 2468 aaKnown RBP16.37■□□□□ 0.21
SF3A3-203ENST00000461869 EIF3CLB5ME19 914 aaKnown RBP16.36■□□□□ 0.21
SF3A3-203ENST00000461869 AKR1B10O60218 316 aa16.36■□□□□ 0.21
SF3A3-203ENST00000461869 NDUFA10O95299 355 aa16.36■□□□□ 0.21
SF3A3-203ENST00000461869 CKMP06732 381 aa16.36■□□□□ 0.21
SF3A3-203ENST00000461869 PROS1P07225 676 aa16.36■□□□□ 0.21
SF3A3-203ENST00000461869 MYL6P60660 151 aa16.36■□□□□ 0.21
SF3A3-203ENST00000461869 KRT83P78385 493 aa16.36■□□□□ 0.21
SF3A3-203ENST00000461869 MYO1EQ12965 1108 aa16.36■□□□□ 0.21
SF3A3-203ENST00000461869 NR1H3Q13133 447 aa16.36■□□□□ 0.21
SF3A3-203ENST00000461869 ZNF667Q5HYK9 610 aa16.36■□□□□ 0.21
SF3A3-203ENST00000461869 INTS6LQ5JSJ4 861 aaKnown RBP16.36■□□□□ 0.21
SF3A3-203ENST00000461869 DAB2IPQ5VWQ8 1189 aa16.36■□□□□ 0.21
SF3A3-203ENST00000461869 HGSNATQ68CP4 663 aa16.36■□□□□ 0.21
SF3A3-203ENST00000461869 RAD9BQ6WBX8 426 aa16.36■□□□□ 0.21
SF3A3-203ENST00000461869 TTC39CQ8N584 583 aa16.36■□□□□ 0.21
SF3A3-203ENST00000461869 ARL14EPQ8N8R7 260 aaPredicted RBP16.36■□□□□ 0.21
SF3A3-203ENST00000461869 FAM84AQ96KN4 292 aa16.36■□□□□ 0.21
SF3A3-203ENST00000461869 KREMEN1Q96MU8 473 aa16.36■□□□□ 0.21
SF3A3-203ENST00000461869 EIF3CQ99613 913 aaKnown RBP16.36■□□□□ 0.21
SF3A3-203ENST00000461869 SIX4Q9UIU6 781 aa16.36■□□□□ 0.21
SF3A3-203ENST00000461869 RALYQ9UKM9 306 aaKnown RBP16.36■□□□□ 0.21
SF3A3-203ENST00000461869 GTF3C4Q9UKN8 822 aa16.36■□□□□ 0.21
SF3A3-203ENST00000461869 L1RE1Q9UN81 338 aa16.36■□□□□ 0.21
SF3A3-203ENST00000461869 EPN1Q9Y6I3 576 aaPredicted RBP16.36■□□□□ 0.21
SF3A3-203ENST00000461869 SDK1Q7Z5N4 2213 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 EML5Q05BV3 1969 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 GIPC1O14908 333 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 ZNF500O60304 480 aaPredicted RBP16.35■□□□□ 0.21
SF3A3-203ENST00000461869 CST3P01034 146 aaPredicted RBP16.35■□□□□ 0.21
SF3A3-203ENST00000461869 EIF4A3P38919 411 aaKnown RBP16.35■□□□□ 0.21
SF3A3-203ENST00000461869 KIF11P52732 1056 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 BPIFB4P59827 614 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 ARID5AQ03989 594 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 USP4Q13107 963 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 SPA17Q15506 151 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 EML3Q32P44 896 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 USP39Q53GS9 565 aaKnown RBP16.35■□□□□ 0.21
SF3A3-203ENST00000461869 IRF2BP2Q7Z5L9 587 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 C11orf74Q86VG3 221 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 SPATA2LQ8IUW3 424 aaPredicted RBP16.35■□□□□ 0.21
SF3A3-203ENST00000461869 SCN4BQ8IWT1 228 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 FAM71AQ8IYT1 594 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 TMEM86AQ8N2M4 240 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 TSTD1Q8NFU3 115 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 CCDC26Q8TAB7 109 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 SH3RF2Q8TEC5 729 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 TATDN2Q93075 761 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 PKMYT1Q99640 499 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 TPSD1Q9BZJ3 242 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 XYLT2Q9H1B5 865 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 APOBEC3GQ9HC16 384 aaKnown RBP16.35■□□□□ 0.21
SF3A3-203ENST00000461869 DENND4CQ5VZ89 1909 aa16.35■□□□□ 0.21
SF3A3-203ENST00000461869 ATG2BQ96BY7 2078 aa16.34■□□□□ 0.21
SF3A3-203ENST00000461869 LNP1A1A4G5 178 aa16.34■□□□□ 0.21
SF3A3-203ENST00000461869 FOXN3O00409 490 aaPredicted RBP16.34■□□□□ 0.21
SF3A3-203ENST00000461869 KHNYNO15037 678 aaKnown RBP16.34■□□□□ 0.21
SF3A3-203ENST00000461869 USP8P40818 1118 aa16.34■□□□□ 0.21
SF3A3-203ENST00000461869 PDE6CP51160 858 aa16.34■□□□□ 0.21
SF3A3-203ENST00000461869 TNNC1P63316 161 aa16.34■□□□□ 0.21
SF3A3-203ENST00000461869 PMS2CLQ68D20 193 aa16.34■□□□□ 0.21
SF3A3-203ENST00000461869 SPOPLQ6IQ16 392 aa16.34■□□□□ 0.21
SF3A3-203ENST00000461869 TOGARAM2Q6ZUX3 1019 aa16.34■□□□□ 0.21
SF3A3-203ENST00000461869 CCAR2Q8N163 923 aaKnown RBP16.34■□□□□ 0.21
SF3A3-203ENST00000461869 CXorf38Q8TB03 319 aa16.34■□□□□ 0.21
SF3A3-203ENST00000461869 KAT5Q92993 513 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms