RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 TADA2BQ86TJ2 420 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 UBR7Q8N806 425 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 IL17RCQ8NAC3 791 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 OLIG1Q8TAK6 271 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 CEP63Q96MT8 703 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 CDK5RAP1Q96SZ6 601 aaKnown RBP9.64□□□□□ -0.87
BRCA1-207ENST00000461798 ARID3AQ99856 593 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 ARRDC1-AS1Q9H2J1 176 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 WDR35Q9P2L0 1181 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 DEC1Q9P2X7 70 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 DNMT3LQ9UJW3 386 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 CDV3Q9UKY7 258 aaKnown RBP9.64□□□□□ -0.87
BRCA1-207ENST00000461798 KIAA1257Q9ULG3 409 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.64□□□□□ -0.87
BRCA1-207ENST00000461798 DCHS1Q96JQ0 3298 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 FRYLO94915 3013 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 TRIM49BA6NDI0 452 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 PPP1R3GB7ZBB8 358 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 SGK1O00141 431 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 PSMA7O14818 248 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 P4HA2O15460 535 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 ADAM23O75077 832 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 RHOBTB1O94844 696 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 RALAP11233 206 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 HNRNPLP14866 589 aaKnown RBP eCLIP9.63□□□□□ -0.87
BRCA1-207ENST00000461798 SEC13P55735 322 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 YWHAEP62258 255 aaKnown RBP9.63□□□□□ -0.87
BRCA1-207ENST00000461798 COG7P83436 770 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 GOLGA8FQ08AF8 430 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 GOLGA8DPQ0D2H9 430 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 STIM1Q13586 685 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 MORC3Q14149 939 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 USP39Q53GS9 565 aaKnown RBP9.63□□□□□ -0.87
BRCA1-207ENST00000461798 EMC10Q5UCC4 262 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 TCERG1LQ5VWI1 586 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 TTI2Q6NXR4 508 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 PIGZQ86VD9 579 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 SFTPA1Q8IWL2 248 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 ARHGAP18Q8N392 663 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 CCDC33Q8N5R6 958 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 ALLCQ8N6M5 410 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 ERCC4Q92889 916 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-207ENST00000461798 NAGPAQ9UK23 515 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 LSM7Q9UK45 103 aaKnown RBP9.63□□□□□ -0.87
BRCA1-207ENST00000461798 FBXO10Q9UK96 956 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 MAN1B1Q9UKM7 699 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 HCN2Q9UL51 889 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 ZNF510Q9Y2H8 683 aa9.63□□□□□ -0.87
BRCA1-207ENST00000461798 HELZP42694 1942 aaKnown RBP9.62□□□□□ -0.87
BRCA1-207ENST00000461798 SDK1Q7Z5N4 2213 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-207ENST00000461798 MED19A0JLT2 244 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-207ENST00000461798 BCLAF3A2AJT9 711 aaKnown RBP9.62□□□□□ -0.87
BRCA1-207ENST00000461798 TBC1D3BA6NDS4 549 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 TM4SF5O14894 197 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 XPO1O14980 1071 aaKnown RBP9.62□□□□□ -0.87
BRCA1-207ENST00000461798 CACNG3O60359 315 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 STC2O76061 302 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 ALDH1A2O94788 518 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 KLF8O95600 359 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-207ENST00000461798 KLKB1P03952 638 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 CISD3P0C7P0 127 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 IRF1P10914 325 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 VDRP11473 427 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 BMP6P22004 513 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 TBXAS1P24557 533 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-207ENST00000461798 FMO5P49326 533 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 SLC8A3P57103 927 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 ELF2Q15723 593 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 ANO4Q32M45 955 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 PKDCCQ504Y2 493 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 DCAF17Q5H9S7 520 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-207ENST00000461798 C10orf120Q5SQS8 335 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 TRMT11Q7Z4G4 463 aaKnown RBP9.62□□□□□ -0.87
BRCA1-207ENST00000461798 TTC30AQ86WT1 665 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 SCML4Q8N228 414 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 NAT16Q8N8M0 369 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 TERB1Q8NA31 727 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 TXNDC5Q8NBS9 432 aaKnown RBP9.62□□□□□ -0.87
BRCA1-207ENST00000461798 LMO3Q8TAP4 145 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 KCTD13Q8WZ19 329 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 JAKMIP2Q96AA8 810 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 XPO6Q96QU8 1125 aaKnown RBP9.62□□□□□ -0.87
BRCA1-207ENST00000461798 DCLK3Q9C098 648 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 POLMQ9NP87 494 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-207ENST00000461798 VPS45Q9NRW7 570 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 NCOR2Q9Y618 2525 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 ATG2BQ96BY7 2078 aa9.62□□□□□ -0.87
BRCA1-207ENST00000461798 DMXL1Q9Y485 3027 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 BICDL2A1A5D9 508 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 DCDC2BA2VCK2 349 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 O00370 1275 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 DCLK1O15075 740 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 MDM4O15151 490 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 TRIM24O15164 1050 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 GDF9O60383 454 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 GNA14O95837 355 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 ZBED1O96006 694 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 PENKP01210 267 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-207ENST00000461798 PAEPP09466 180 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms