RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 CLEC9AQ6UXN8 241 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 GATAD2AQ86YP4 633 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 RASGRP3Q8IV61 690 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 SRRM1Q8IYB3 904 aaKnown RBP3.97□□□□□ -1.77
RFC4-211ENST00000460408 SPATA5Q8NB90 893 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 MYRIPQ8NFW9 859 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 CAGE1Q8TC20 777 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 TRAPPC12Q8WVT3 735 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 TFAP2BQ92481 460 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 CCT6BQ92526 530 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 PRPF18Q99633 342 aaKnown RBP3.97□□□□□ -1.77
RFC4-211ENST00000460408 NUDT22Q9BRQ3 303 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 SORBS1Q9BX66 1292 aaKnown RBP3.97□□□□□ -1.77
RFC4-211ENST00000460408 LPAR3Q9UBY5 353 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 STEAP1Q9UHE8 339 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 USP22Q9UPT9 525 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 A8MVJ9 347 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 J3KTA2 159 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 M0R3H8 397 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 ZSCAN9O15535 394 aaPredicted RBP3.96□□□□□ -1.78
RFC4-211ENST00000460408 SPRY2O43597 315 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 SNX2O60749 519 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 TAF5LO75529 589 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 USP1O94782 785 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 IGLV2-14P01704 120 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 ELFN1P0C7U0 828 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 KLRK1P26718 216 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 CTGFP29279 349 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 GKP32189 559 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 MPP3Q13368 585 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 RAPGEF1Q13905 1077 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 GRM4Q14833 912 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 POSTNQ15063 836 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 TRIM60Q495X7 471 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 KAZNQ674X7 775 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 SULT6B1Q6IMI4 303 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 PEG10Q86TG7 708 aaKnown RBP3.96□□□□□ -1.78
RFC4-211ENST00000460408 C11orf44Q8N8P7 122 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 OTUD7AQ8TE49 926 aaPredicted RBP3.96□□□□□ -1.78
RFC4-211ENST00000460408 RSC1A1Q92681 617 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 GRAMD1AQ96CP6 724 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 PDLIM2Q96JY6 352 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 PRR25Q96S07 402 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 EPS8L2Q9H6S3 715 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 PRDM8Q9NQV8 689 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 SERTAD4Q9NUC0 356 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 FOXJ2Q9P0K8 574 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 TLK1Q9UKI8 766 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 DGKBQ9Y6T7 804 aa3.96□□□□□ -1.78
RFC4-211ENST00000460408 GXYLT2A0PJZ3 443 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 DNPH1O43598 174 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 PMPCBO75439 489 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 RBMXL2O75526 392 aaKnown RBP3.95□□□□□ -1.78
RFC4-211ENST00000460408 URI1O94763 535 aaPredicted RBP3.95□□□□□ -1.78
RFC4-211ENST00000460408 WDR47O94967 919 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 ITGA2BP08514 1039 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 DHRS4L1P0CG22 281 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 SRGAP2BP0DMP2 458 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 NR2F6P10588 404 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 CD19P15391 556 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 MCM5P33992 734 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 PBX1P40424 430 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 GRIA3P42263 894 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 MTHFSP49914 203 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 RENBPP51606 427 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 ALDH18A1P54886 795 aaKnown RBP3.95□□□□□ -1.78
RFC4-211ENST00000460408 PRKG1Q13976 671 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 AASDHQ4L235 1098 aaPredicted RBP3.95□□□□□ -1.78
RFC4-211ENST00000460408 FAM90A2PQ658T7 463 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 GRHL2Q6ISB3 625 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 MSANTD2Q6P1R3 559 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 DPY19L3Q6ZPD9 716 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 PIK3AP1Q6ZUJ8 805 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 Q6ZWC4 215 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 ZNF551Q7Z340 670 aaPredicted RBP3.95□□□□□ -1.78
RFC4-211ENST00000460408 SUGP1Q8IWZ8 645 aaKnown RBP3.95□□□□□ -1.78
RFC4-211ENST00000460408 CLASRPQ8N2M8 674 aaKnown RBP3.95□□□□□ -1.78
RFC4-211ENST00000460408 GALNT15Q8N3T1 639 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 FSTL5Q8N475 847 aaPredicted RBP3.95□□□□□ -1.78
RFC4-211ENST00000460408 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.95□□□□□ -1.78
RFC4-211ENST00000460408 RP9Q8TA86 221 aaKnown RBP3.95□□□□□ -1.78
RFC4-211ENST00000460408 ACTRT2Q8TDY3 377 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 SCARB1Q8WTV0 552 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 XAGE5Q8WWM1 108 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 TBC1D20Q96BZ9 403 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 PAAF1Q9BRP4 392 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 RTKNQ9BST9 563 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 DDX23Q9BUQ8 820 aaKnown RBP3.95□□□□□ -1.78
RFC4-211ENST00000460408 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.95□□□□□ -1.78
RFC4-211ENST00000460408 PABPC3Q9H361 631 aaKnown RBP3.95□□□□□ -1.78
RFC4-211ENST00000460408 MLXIPQ9HAP2 919 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 DUSP22Q9NRW4 184 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 RXFP3Q9NSD7 469 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 DLL3Q9NYJ7 618 aa3.95□□□□□ -1.78
RFC4-211ENST00000460408 NKX1-2Q9UD57 310 aaPredicted RBP3.95□□□□□ -1.78
RFC4-211ENST00000460408 SRP68Q9UHB9 627 aaKnown RBP3.95□□□□□ -1.78
RFC4-211ENST00000460408 HERC5Q9UII4 1024 aaKnown RBP3.95□□□□□ -1.78
RFC4-211ENST00000460408 FAM90A18PA6NE21 464 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 FAM90A16PA6NEW6 464 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 FAM90A9PA6NNJ1 464 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms