RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 T-ENOLP0DO92 83 aa18.82■□□□□ 0.6
HPS3-202ENST00000460120 ZBTB16Q05516 673 aa18.82■□□□□ 0.6
HPS3-202ENST00000460120 BOLA3Q53S33 107 aa18.82■□□□□ 0.6
HPS3-202ENST00000460120 WLSQ5T9L3 541 aa18.82■□□□□ 0.6
HPS3-202ENST00000460120 ZNF276Q8N554 614 aa18.82■□□□□ 0.6
HPS3-202ENST00000460120 NSMCE1Q8WV22 266 aa18.82■□□□□ 0.6
HPS3-202ENST00000460120 SLC35F5Q8WV83 523 aa18.82■□□□□ 0.6
HPS3-202ENST00000460120 RNF39Q9H2S5 420 aa18.82■□□□□ 0.6
HPS3-202ENST00000460120 NRDE2Q9H7Z3 1164 aa18.82■□□□□ 0.6
HPS3-202ENST00000460120 IL1RAPL1Q9NZN1 696 aa18.82■□□□□ 0.6
HPS3-202ENST00000460120 KANSL3Q9P2N6 904 aa18.82■□□□□ 0.6
HPS3-202ENST00000460120 HEY2Q9UBP5 337 aa18.82■□□□□ 0.6
HPS3-202ENST00000460120 SCN1AP35498 2009 aa18.82■□□□□ 0.6
HPS3-202ENST00000460120 COPEO14579 308 aa18.82■□□□□ 0.6
HPS3-202ENST00000460120 DYNC1LI2O43237 492 aaPredicted RBP18.82■□□□□ 0.6
HPS3-202ENST00000460120 GRM5P41594 1212 aa18.82■□□□□ 0.6
HPS3-202ENST00000460120 ARMC2Q8NEN0 867 aa18.82■□□□□ 0.6
HPS3-202ENST00000460120 SLC2A14Q8TDB8 520 aa18.82■□□□□ 0.6
HPS3-202ENST00000460120 PCMTD2Q9NV79 361 aa18.82■□□□□ 0.6
HPS3-202ENST00000460120 MCM8Q9UJA3 840 aa18.82■□□□□ 0.6
HPS3-202ENST00000460120 AP4E1Q9UPM8 1137 aa18.82■□□□□ 0.6
HPS3-202ENST00000460120 E2F8A0AVK6 867 aa18.81■□□□□ 0.6
HPS3-202ENST00000460120 SPTLC1O15269 473 aa18.81■□□□□ 0.6
HPS3-202ENST00000460120 CHADO15335 359 aa18.81■□□□□ 0.6
HPS3-202ENST00000460120 MMP3P08254 477 aa18.81■□□□□ 0.6
HPS3-202ENST00000460120 F7P08709 466 aaPredicted RBP18.81■□□□□ 0.6
HPS3-202ENST00000460120 CSH1P0DML2 217 aa18.81■□□□□ 0.6
HPS3-202ENST00000460120 CSH2P0DML3 217 aa18.81■□□□□ 0.6
HPS3-202ENST00000460120 GOT1P17174 413 aa18.81■□□□□ 0.6
HPS3-202ENST00000460120 ACAT1P24752 427 aaKnown RBP18.81■□□□□ 0.6
HPS3-202ENST00000460120 PITX1P78337 314 aaPredicted RBP18.81■□□□□ 0.6
HPS3-202ENST00000460120 MDH1BQ5I0G3 518 aa18.81■□□□□ 0.6
HPS3-202ENST00000460120 KCNT2Q6UVM3 1135 aa18.81■□□□□ 0.6
HPS3-202ENST00000460120 APOPT1Q96IL0 206 aa18.81■□□□□ 0.6
HPS3-202ENST00000460120 SRPK1Q96SB4 655 aaKnown RBP18.81■□□□□ 0.6
HPS3-202ENST00000460120 POPDC2Q9HBU9 364 aa18.81■□□□□ 0.6
HPS3-202ENST00000460120 MAGED2Q9UNF1 606 aaPredicted RBP18.81■□□□□ 0.6
HPS3-202ENST00000460120 PIN4Q9Y237 131 aaKnown RBP18.81■□□□□ 0.6
HPS3-202ENST00000460120 CLDN5O00501 218 aa18.81■□□□□ 0.6
HPS3-202ENST00000460120 IGFBP6P24592 240 aaPredicted RBP18.81■□□□□ 0.6
HPS3-202ENST00000460120 PDK2Q15119 407 aa18.81■□□□□ 0.6
HPS3-202ENST00000460120 RGS9BPQ6ZS82 235 aa18.81■□□□□ 0.6
HPS3-202ENST00000460120 KCTD15Q96SI1 283 aaPredicted RBP18.81■□□□□ 0.6
HPS3-202ENST00000460120 TBCBQ99426 244 aa18.81■□□□□ 0.6
HPS3-202ENST00000460120 LGMNQ99538 433 aa18.81■□□□□ 0.6
HPS3-202ENST00000460120 PPCSQ9HAB8 311 aa18.81■□□□□ 0.6
HPS3-202ENST00000460120 PLAC1Q9HBJ0 212 aa18.81■□□□□ 0.6
HPS3-202ENST00000460120 FAM237BA0A1B0GVD1 139 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 SERPINB3P29508 390 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 EPHX2P34913 555 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 SLC18A1P54219 525 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 UNC5AQ6ZN44 842 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 EP400NLQ6ZTU2 488 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 TTC7BQ86TV6 843 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 SNX27Q96L92 541 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 TBC1D10AQ9BXI6 508 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 SLC4A5Q9BY07 1137 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 ARMCX1Q9P291 453 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 NKX1-2Q9UD57 310 aaPredicted RBP18.8■□□□□ 0.6
HPS3-202ENST00000460120 CLEC11AQ9Y240 323 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 TM9SF1O15321 606 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 L1CAMP32004 1257 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 ERFP50548 548 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 CCDC15Q0P6D6 951 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 SLC26A11Q86WA9 606 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 VPS52Q8N1B4 723 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 BEST2Q8NFU1 509 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 SLC7A6OSQ96CW6 309 aaPredicted RBP18.8■□□□□ 0.6
HPS3-202ENST00000460120 TMEM120AQ9BXJ8 343 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 TRIM55Q9BYV6 548 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 VTA1Q9NP79 307 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 TGM2P21980 687 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 GNL1P36915 607 aaPredicted RBP18.8■□□□□ 0.6
HPS3-202ENST00000460120 ARFIP2P53365 341 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 POU5F1BQ06416 359 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 PKDCCQ504Y2 493 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 C9orf57Q5W0N0 161 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 SLC27A1Q6PCB7 646 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 TMEM110Q86TL2 294 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 IFNLR1Q8IU57 520 aaPredicted RBP18.8■□□□□ 0.6
HPS3-202ENST00000460120 DNAJB3Q8WWF6 145 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 CYLDQ9NQC7 956 aa18.8■□□□□ 0.6
HPS3-202ENST00000460120 SLC15A5A6NIM6 579 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 BTBD19C9JJ37 291 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 CREB3O43889 395 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 DESP17661 470 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 CPA2P48052 419 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 SERPINB4P48594 390 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 SESN2P58004 480 aaPredicted RBP18.79■□□□□ 0.6
HPS3-202ENST00000460120 CCNA1P78396 465 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 RIPK1Q13546 671 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 RASA2Q15283 850 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 SLC9A4Q6AI14 798 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 ZCCHC23Q6ZST2 131 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 CLNKQ7Z7G1 428 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.79■□□□□ 0.6
HPS3-202ENST00000460120 TTC8Q8TAM2 541 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 TMEM40Q8WWA1 233 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 RAB3IPQ96QF0 476 aaPredicted RBP18.79■□□□□ 0.6
HPS3-202ENST00000460120 SNX25Q9H3E2 840 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms