RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 C10orf120Q5SQS8 335 aa18.19■□□□□ 0.5
USP39-208ENST00000455732 ADGRG2Q8IZP9 1017 aa18.19■□□□□ 0.5
USP39-208ENST00000455732 ANKRD20A12PQ8NF67 263 aa18.19■□□□□ 0.5
USP39-208ENST00000455732 STK32AQ8WU08 396 aa18.19■□□□□ 0.5
USP39-208ENST00000455732 IRGQQ8WZA9 623 aa18.19■□□□□ 0.5
USP39-208ENST00000455732 P2RY13Q9BPV8 354 aa18.19■□□□□ 0.5
USP39-208ENST00000455732 NAA15Q9BXJ9 866 aaKnown RBP18.19■□□□□ 0.5
USP39-208ENST00000455732 HSD3B7Q9H2F3 369 aa18.19■□□□□ 0.5
USP39-208ENST00000455732 C2orf42Q9NWW7 574 aa18.19■□□□□ 0.5
USP39-208ENST00000455732 SH3BP1Q9Y3L3 701 aa18.19■□□□□ 0.5
USP39-208ENST00000455732 LRRC10BA6NIK2 292 aa18.18■□□□□ 0.5
USP39-208ENST00000455732 THAP12O43422 761 aa18.18■□□□□ 0.5
USP39-208ENST00000455732 GABBR2O75899 941 aa18.18■□□□□ 0.5
USP39-208ENST00000455732 FBXO21O94952 628 aa18.18■□□□□ 0.5
USP39-208ENST00000455732 EGFP01133 1207 aa18.18■□□□□ 0.5
USP39-208ENST00000455732 CYP17A1P05093 508 aa18.18■□□□□ 0.5
USP39-208ENST00000455732 UCHL3P15374 230 aa18.18■□□□□ 0.5
USP39-208ENST00000455732 DAOAP59103 153 aa18.18■□□□□ 0.5
USP39-208ENST00000455732 PPP2R5DQ14738 602 aa18.18■□□□□ 0.5
USP39-208ENST00000455732 HTR3DQ70Z44 454 aa18.18■□□□□ 0.5
USP39-208ENST00000455732 FAM71AQ8IYT1 594 aa18.18■□□□□ 0.5
USP39-208ENST00000455732 SUMF1Q8NBK3 374 aa18.18■□□□□ 0.5
USP39-208ENST00000455732 EZH1Q92800 747 aaPredicted RBP18.18■□□□□ 0.5
USP39-208ENST00000455732 EXOC4Q96A65 974 aa18.18■□□□□ 0.5
USP39-208ENST00000455732 FUCA2Q9BTY2 467 aa18.18■□□□□ 0.5
USP39-208ENST00000455732 LSM14BQ9BX40 385 aaKnown RBP18.18■□□□□ 0.5
USP39-208ENST00000455732 VPS16Q9H269 839 aa18.18■□□□□ 0.5
USP39-208ENST00000455732 DAAM1Q9Y4D1 1078 aa18.18■□□□□ 0.5
USP39-208ENST00000455732 FHOD1Q9Y613 1164 aa18.18■□□□□ 0.5
USP39-208ENST00000455732 SPAG17Q6Q759 2223 aa18.18■□□□□ 0.5
USP39-208ENST00000455732 LGALS16A8MUM7 142 aa18.17■□□□□ 0.5
USP39-208ENST00000455732 K7ESF4 209 aa18.17■□□□□ 0.5
USP39-208ENST00000455732 FOXN3O00409 490 aaPredicted RBP18.17■□□□□ 0.5
USP39-208ENST00000455732 SCAMP3O14828 347 aaKnown RBP18.17■□□□□ 0.5
USP39-208ENST00000455732 MDM4O15151 490 aa18.17■□□□□ 0.5
USP39-208ENST00000455732 DRD1P21728 446 aa18.17■□□□□ 0.5
USP39-208ENST00000455732 USP8P40818 1118 aa18.17■□□□□ 0.5
USP39-208ENST00000455732 RGS7P49802 495 aa18.17■□□□□ 0.5
USP39-208ENST00000455732 COPB1P53618 953 aaKnown RBP18.17■□□□□ 0.5
USP39-208ENST00000455732 PTK2Q05397 1052 aa18.17■□□□□ 0.5
USP39-208ENST00000455732 DHCR24Q15392 516 aa18.17■□□□□ 0.5
USP39-208ENST00000455732 FKBP15Q5T1M5 1219 aa18.17■□□□□ 0.5
USP39-208ENST00000455732 DENND1BQ6P3S1 775 aa18.17■□□□□ 0.5
USP39-208ENST00000455732 PKN3Q6P5Z2 889 aa18.17■□□□□ 0.5
USP39-208ENST00000455732 APTXQ7Z2E3 356 aaKnown RBP18.17■□□□□ 0.5
USP39-208ENST00000455732 AOPEPQ8N6M6 819 aa18.17■□□□□ 0.5
USP39-208ENST00000455732 ATRIPQ8WXE1 791 aa18.17■□□□□ 0.5
USP39-208ENST00000455732 CD101Q93033 1021 aa18.17■□□□□ 0.5
USP39-208ENST00000455732 WBP2Q969T9 261 aa18.17■□□□□ 0.5
USP39-208ENST00000455732 ACP6Q9NPH0 428 aa18.17■□□□□ 0.5
USP39-208ENST00000455732 OLA1Q9NTK5 396 aaKnown RBP18.17■□□□□ 0.5
USP39-208ENST00000455732 LSM7Q9UK45 103 aaKnown RBP18.17■□□□□ 0.5
USP39-208ENST00000455732 NUDT5Q9UKK9 219 aa18.17■□□□□ 0.5
USP39-208ENST00000455732 PCDHGC3Q9UN70 934 aa18.17■□□□□ 0.5
USP39-208ENST00000455732 YJEFN3A6XGL0 299 aa18.16■□□□□ 0.5
USP39-208ENST00000455732 E7ENQ6 273 aa18.16■□□□□ 0.5
USP39-208ENST00000455732 ADH1CP00326 375 aa18.16■□□□□ 0.5
USP39-208ENST00000455732 IRF1P10914 325 aa18.16■□□□□ 0.5
USP39-208ENST00000455732 LCP1P13796 627 aa18.16■□□□□ 0.5
USP39-208ENST00000455732 CLCN1P35523 988 aa18.16■□□□□ 0.5
USP39-208ENST00000455732 OPRD1P41143 372 aa18.16■□□□□ 0.5
USP39-208ENST00000455732 ACADSBP45954 432 aa18.16■□□□□ 0.5
USP39-208ENST00000455732 NRLP54845 237 aa18.16■□□□□ 0.5
USP39-208ENST00000455732 BPIFB4P59827 614 aa18.16■□□□□ 0.5
USP39-208ENST00000455732 COG7P83436 770 aa18.16■□□□□ 0.5
USP39-208ENST00000455732 DRAP1Q14919 205 aaPredicted RBP18.16■□□□□ 0.5
USP39-208ENST00000455732 BTBD8Q5XKL5 378 aa18.16■□□□□ 0.5
USP39-208ENST00000455732 RHBDF2Q6PJF5 856 aa18.16■□□□□ 0.5
USP39-208ENST00000455732 Q6ZNB5 142 aa18.16■□□□□ 0.5
USP39-208ENST00000455732 BBS7Q8IWZ6 715 aa18.16■□□□□ 0.5
USP39-208ENST00000455732 NDRG1Q92597 394 aaKnown RBP18.16■□□□□ 0.5
USP39-208ENST00000455732 SLC4A5Q9BY07 1137 aa18.16■□□□□ 0.5
USP39-208ENST00000455732 GANQ9H2C0 597 aa18.16■□□□□ 0.5
USP39-208ENST00000455732 ABCC13Q9NSE7 274 aa18.16■□□□□ 0.5
USP39-208ENST00000455732 MARCH2Q9P0N8 246 aa18.16■□□□□ 0.5
USP39-208ENST00000455732 RASAL2Q9UJF2 1139 aa18.16■□□□□ 0.5
USP39-208ENST00000455732 STRIP2Q9ULQ0 834 aa18.16■□□□□ 0.5
USP39-208ENST00000455732 SART1O43290 800 aaKnown RBP18.15■□□□□ 0.5
USP39-208ENST00000455732 RNF40O75150 1001 aa18.15■□□□□ 0.5
USP39-208ENST00000455732 STC2O76061 302 aa18.15■□□□□ 0.5
USP39-208ENST00000455732 EIF2DP41214 584 aaKnown RBP18.15■□□□□ 0.5
USP39-208ENST00000455732 EFEMP1Q12805 493 aa18.15■□□□□ 0.5
USP39-208ENST00000455732 RAPGEF1Q13905 1077 aa18.15■□□□□ 0.5
USP39-208ENST00000455732 FBXO43Q4G163 708 aa18.15■□□□□ 0.5
USP39-208ENST00000455732 BSPRYQ5W0U4 402 aa18.15■□□□□ 0.5
USP39-208ENST00000455732 RSRC2Q7L4I2 434 aaKnown RBP18.15■□□□□ 0.5
USP39-208ENST00000455732 MIB1Q86YT6 1006 aa18.15■□□□□ 0.5
USP39-208ENST00000455732 DHX40Q8IX18 779 aaKnown RBP18.15■□□□□ 0.5
USP39-208ENST00000455732 STK33Q9BYT3 514 aa18.15■□□□□ 0.5
USP39-208ENST00000455732 LHX5Q9H2C1 402 aa18.15■□□□□ 0.5
USP39-208ENST00000455732 SIK3Q9Y2K2 1263 aa18.15■□□□□ 0.5
USP39-208ENST00000455732 DCHS1Q96JQ0 3298 aa18.15■□□□□ 0.5
USP39-208ENST00000455732 SMTNL1A8MU46 457 aa18.14■□□□□ 0.49
USP39-208ENST00000455732 CHURC1-FNTBB4DL54 471 aa18.14■□□□□ 0.49
USP39-208ENST00000455732 F8VZ95 297 aa18.14■□□□□ 0.49
USP39-208ENST00000455732 HOXC11O43248 304 aaPredicted RBP18.14■□□□□ 0.49
USP39-208ENST00000455732 PNMA6AP0CW24 399 aaPredicted RBP18.14■□□□□ 0.49
USP39-208ENST00000455732 ADH5P11766 374 aa18.14■□□□□ 0.49
USP39-208ENST00000455732 CDK11BP21127 795 aaKnown RBP18.14■□□□□ 0.49
USP39-208ENST00000455732 HOXA6P31267 233 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms