RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 CCR2P41597 374 aa17.33■□□□□ 0.37
CCDC90B-202ENST00000455220 NAP1L1P55209 391 aaKnown RBP17.33■□□□□ 0.37
CCDC90B-202ENST00000455220 PIGHQ14442 188 aaPredicted RBP17.33■□□□□ 0.37
CCDC90B-202ENST00000455220 ACAP1Q15027 740 aa17.33■□□□□ 0.37
CCDC90B-202ENST00000455220 PRSS36Q5K4E3 855 aa17.33■□□□□ 0.37
CCDC90B-202ENST00000455220 RARS2Q5T160 578 aaKnown RBP17.33■□□□□ 0.37
CCDC90B-202ENST00000455220 OTUD1Q5VV17 481 aaPredicted RBP17.33■□□□□ 0.37
CCDC90B-202ENST00000455220 KLHDC10Q6PID8 442 aa17.33■□□□□ 0.37
CCDC90B-202ENST00000455220 PDZD4Q76G19 769 aaPredicted RBP17.33■□□□□ 0.37
CCDC90B-202ENST00000455220 SLFN11Q7Z7L1 901 aa17.33■□□□□ 0.37
CCDC90B-202ENST00000455220 GPR149Q86SP6 731 aa17.33■□□□□ 0.37
CCDC90B-202ENST00000455220 MYLIPQ8WY64 445 aa17.33■□□□□ 0.37
CCDC90B-202ENST00000455220 CENPIQ92674 756 aaPredicted RBP17.33■□□□□ 0.37
CCDC90B-202ENST00000455220 PGAP3Q96FM1 320 aaPredicted RBP17.33■□□□□ 0.37
CCDC90B-202ENST00000455220 CDK5RAP1Q96SZ6 601 aaKnown RBP17.33■□□□□ 0.37
CCDC90B-202ENST00000455220 ADAM33Q9BZ11 813 aa17.33■□□□□ 0.37
CCDC90B-202ENST00000455220 IRX2Q9BZI1 471 aaPredicted RBP17.33■□□□□ 0.37
CCDC90B-202ENST00000455220 OLA1Q9NTK5 396 aaKnown RBP17.33■□□□□ 0.37
CCDC90B-202ENST00000455220 NRG2O14511 850 aaPredicted RBP17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 TLR5O60602 858 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 MOSPD3O75425 235 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 OAS1P00973 400 aaKnown RBP17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 IGLV3-25P01717 112 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 MYL4P12829 197 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 PITX1P78337 314 aaPredicted RBP17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 MESDQ14696 234 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 HECTD3Q5T447 861 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 GRASPQ7Z6J2 395 aaPredicted RBP17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 DEFB123Q8N688 67 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 SHKBP1Q8TBC3 707 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 DQX1Q8TE96 717 aaKnown RBP17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 RNF139Q8WU17 664 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 GCNAQ96QF7 691 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 SMOC2Q9H3U7 446 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 CCSER2Q9H7U1 834 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 CLDND1Q9NY35 253 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 A0A1W2PRU2 124 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 PALMO75781 387 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 ENDOD1O94919 500 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 OLFM2O95897 454 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 TFE3P19532 575 aaPredicted RBP17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 ITIH3Q06033 890 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 DLX2Q07687 328 aaPredicted RBP17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 EIF4EBP2Q13542 120 aaPredicted RBP17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 SLC5A9Q2M3M2 681 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 C15orf59Q2T9L4 293 aaPredicted RBP17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 STRADAQ7RTN6 431 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 TADA2BQ86TJ2 420 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 TAC4Q86UU9 113 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 MICALL1Q8N3F8 863 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 TRIM58Q8NG06 486 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 MRPS31Q92665 395 aaKnown RBP17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 MSLNLQ96KJ4 702 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 TBCBQ99426 244 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 S1PR5Q9H228 398 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 ADAM7Q9H2U9 754 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 PIDD1Q9HB75 910 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 CALCOCO1Q9P1Z2 691 aa17.32■□□□□ 0.36
CCDC90B-202ENST00000455220 C2orf78A6NCI8 922 aa17.31■□□□□ 0.36
CCDC90B-202ENST00000455220 SOBPA7XYQ1 873 aa17.31■□□□□ 0.36
CCDC90B-202ENST00000455220 ZNF197O14709 1029 aa17.31■□□□□ 0.36
CCDC90B-202ENST00000455220 KIF5CO60282 957 aa17.31■□□□□ 0.36
CCDC90B-202ENST00000455220 TRUB2O95900 331 aaKnown RBP17.31■□□□□ 0.36
CCDC90B-202ENST00000455220 PFKLP17858 780 aa17.31■□□□□ 0.36
CCDC90B-202ENST00000455220 SLC1A1P43005 524 aa17.31■□□□□ 0.36
CCDC90B-202ENST00000455220 SULT1E1P49888 294 aa17.31■□□□□ 0.36
CCDC90B-202ENST00000455220 NTHL1P78549 312 aa17.31■□□□□ 0.36
CCDC90B-202ENST00000455220 ATP11AP98196 1134 aa17.31■□□□□ 0.36
CCDC90B-202ENST00000455220 RSRC2Q7L4I2 434 aaKnown RBP17.31■□□□□ 0.36
CCDC90B-202ENST00000455220 DAAM2Q86T65 1068 aa17.31■□□□□ 0.36
CCDC90B-202ENST00000455220 SYCE1Q8N0S2 351 aa17.31■□□□□ 0.36
CCDC90B-202ENST00000455220 ARFGAP1Q8N6T3 406 aa17.31■□□□□ 0.36
CCDC90B-202ENST00000455220 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.31■□□□□ 0.36
CCDC90B-202ENST00000455220 TCEAL4Q96EI5 215 aa17.31■□□□□ 0.36
CCDC90B-202ENST00000455220 ALS2CR12Q96Q35 445 aa17.31■□□□□ 0.36
CCDC90B-202ENST00000455220 ATXN3LQ9H3M9 355 aa17.31■□□□□ 0.36
CCDC90B-202ENST00000455220 MTMR10Q9NXD2 777 aa17.31■□□□□ 0.36
CCDC90B-202ENST00000455220 NUDT5Q9UKK9 219 aa17.31■□□□□ 0.36
CCDC90B-202ENST00000455220 ALG6Q9Y672 507 aa17.31■□□□□ 0.36
CCDC90B-202ENST00000455220 COCHO43405 550 aa17.3■□□□□ 0.36
CCDC90B-202ENST00000455220 LRCH4O75427 683 aa17.3■□□□□ 0.36
CCDC90B-202ENST00000455220 TBX18O95935 607 aa17.3■□□□□ 0.36
CCDC90B-202ENST00000455220 DESP17661 470 aa17.3■□□□□ 0.36
CCDC90B-202ENST00000455220 DDX6P26196 483 aaKnown RBP eCLIP17.3■□□□□ 0.36
CCDC90B-202ENST00000455220 PCK1P35558 622 aa17.3■□□□□ 0.36
CCDC90B-202ENST00000455220 ATP5C1P36542 298 aaKnown RBP17.3■□□□□ 0.36
CCDC90B-202ENST00000455220 HDAC4P56524 1084 aa17.3■□□□□ 0.36
CCDC90B-202ENST00000455220 CYP4F8P98187 520 aa17.3■□□□□ 0.36
CCDC90B-202ENST00000455220 NNTQ13423 1086 aa17.3■□□□□ 0.36
CCDC90B-202ENST00000455220 C10orf120Q5SQS8 335 aa17.3■□□□□ 0.36
CCDC90B-202ENST00000455220 SH3PXD2AQ5TCZ1 1133 aa17.3■□□□□ 0.36
CCDC90B-202ENST00000455220 FAM172AQ8WUF8 416 aa17.3■□□□□ 0.36
CCDC90B-202ENST00000455220 NCAPGQ9BPX3 1015 aa17.3■□□□□ 0.36
CCDC90B-202ENST00000455220 GOLPH3Q9H4A6 298 aa17.3■□□□□ 0.36
CCDC90B-202ENST00000455220 TMEM51Q9NW97 253 aa17.3■□□□□ 0.36
CCDC90B-202ENST00000455220 CLUHO75153 1309 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 TMEM110-MUSTN1A8MSY1 372 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 M0QYT0 321 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 IRAK2O43187 625 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 RNF8O76064 485 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms