RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ZNF534Q76KX8 674 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 STRADAQ7RTN6 431 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 TRMT1LQ7Z2T5 733 aaKnown RBP5.2□□□□□ -1.58
RIF1-207ENST00000454583 PIGZQ86VD9 579 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 PASD1Q8IV76 773 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 APPL2Q8NEU8 664 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 OR52K2Q8NGK3 314 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 CPA5Q8WXQ8 436 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 EZH1Q92800 747 aaPredicted RBP5.2□□□□□ -1.58
RIF1-207ENST00000454583 C1orf74Q96LT6 269 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 LRRC1Q9BTT6 524 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 TTPALQ9BTX7 342 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 RNF38Q9H0F5 515 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 ADAM7Q9H2U9 754 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 LRRC19Q9H756 370 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 CNGB3Q9NQW8 809 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 PIGVQ9NUD9 493 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 PPARGC1AQ9UBK2 798 aaKnown RBP5.2□□□□□ -1.58
RIF1-207ENST00000454583 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.2□□□□□ -1.58
RIF1-207ENST00000454583 V9GYY5 206 aaPredicted RBP5.2□□□□□ -1.58
RIF1-207ENST00000454583 FAM72CH0Y354 149 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 SNPHO15079 494 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 KIF5CO60282 957 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 TBX10O75333 385 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 FTLP02792 175 aaPredicted RBP5.2□□□□□ -1.58
RIF1-207ENST00000454583 KLKB1P03952 638 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 TRIM21P19474 475 aaKnown RBP5.2□□□□□ -1.58
RIF1-207ENST00000454583 BCAT1P54687 386 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 SKOR1P84550 965 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 CBX2Q14781 532 aaPredicted RBP5.2□□□□□ -1.58
RIF1-207ENST00000454583 CA9Q16790 459 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 TTMPQ5BVD1 217 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 FAM72AQ5TYM5 149 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 PDE12Q6L8Q7 609 aaKnown RBP5.2□□□□□ -1.58
RIF1-207ENST00000454583 FAM72DQ6L9T8 149 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 FAM72BQ86X60 149 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 CREBRFQ8IUR6 639 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 TDHQ8IZJ6 230 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 CBARPQ8N350 705 aaPredicted RBP5.2□□□□□ -1.58
RIF1-207ENST00000454583 SLC35B2Q8TB61 432 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 CASKIN2Q8WXE0 1202 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 MS4A14Q96JA4 679 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 ZHX3Q9H4I2 956 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 ZNHIT6Q9NWK9 470 aaKnown RBP5.2□□□□□ -1.58
RIF1-207ENST00000454583 SMARCAL1Q9NZC9 954 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 HCFC2Q9Y5Z7 792 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 ZFC3H1O60293 1989 aaKnown RBP5.2□□□□□ -1.58
RIF1-207ENST00000454583 ZNF840PA6NDX5 716 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 KRT86O43790 486 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 OR4Q2P0C623 313 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 TCP1P17987 556 aaKnown RBP5.2□□□□□ -1.58
RIF1-207ENST00000454583 IRAK1P51617 712 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 YWHAEP62258 255 aaKnown RBP5.2□□□□□ -1.58
RIF1-207ENST00000454583 RING1Q06587 406 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 DPYSL3Q14195 570 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 PRKD1Q15139 912 aaPredicted RBP5.2□□□□□ -1.58
RIF1-207ENST00000454583 SLC25A52Q3SY17 297 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 MDH1BQ5I0G3 518 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 DEFB128Q7Z7B8 93 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 FMNL3Q8IVF7 1028 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 TEX26Q8N6G2 289 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 RASSF8Q8NHQ8 419 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 SCAMP5Q8TAC9 235 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 NDRG1Q92597 394 aaKnown RBP5.2□□□□□ -1.58
RIF1-207ENST00000454583 SMARCD1Q96GM5 515 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 BTBD6Q96KE9 485 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 SLITRK1Q96PX8 696 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 TMEM109Q9BVC6 243 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 USP29Q9HBJ7 922 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 HYOU1Q9Y4L1 999 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 SNX9Q9Y5X1 595 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 ASPMQ8IZT6 3477 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 NUP205Q92621 2012 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 TBKBP1A7MCY6 615 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 M0QZ92 97 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 PSTPIP1O43586 416 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 PPFIA2O75334 1257 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 TUBBP07437 444 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 FAM153BP0C7A2 387 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 ACAT1P24752 427 aaKnown RBP5.19□□□□□ -1.58
RIF1-207ENST00000454583 CYP2F1P24903 491 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 MATKP42679 507 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 SGSHP51688 502 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 SLC5A3P53794 718 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 ATXN1P54253 815 aaKnown RBP5.19□□□□□ -1.58
RIF1-207ENST00000454583 PSMC1P62191 440 aaKnown RBP5.19□□□□□ -1.58
RIF1-207ENST00000454583 GPC5P78333 572 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 PAFAH1B3Q15102 231 aaKnown RBP5.19□□□□□ -1.58
RIF1-207ENST00000454583 ZNF77Q15935 545 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 PPP2R5EQ16537 467 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 FAM153CQ494X1 144 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 PIK3R6Q5UE93 754 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 PLPP4Q5VZY2 271 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 KCTD11Q693B1 232 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 AADACL2Q6P093 401 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 APBB1IPQ7Z5R6 666 aaPredicted RBP5.19□□□□□ -1.58
RIF1-207ENST00000454583 CCDC185Q8N715 623 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.19□□□□□ -1.58
RIF1-207ENST00000454583 BICD1Q96G01 975 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 CARD9Q9H257 536 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms