RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 IER2Q9BTL4 223 aa14.84□□□□□ -0.03
HDAC4-205ENST00000454542 TTYH3Q9C0H2 523 aa14.84□□□□□ -0.03
HDAC4-205ENST00000454542 LINC00597Q9H2U6 94 aa14.84□□□□□ -0.03
HDAC4-205ENST00000454542 NLRC4Q9NPP4 1024 aa14.84□□□□□ -0.03
HDAC4-205ENST00000454542 ABCC13Q9NSE7 274 aa14.84□□□□□ -0.03
HDAC4-205ENST00000454542 TJP2Q9UDY2 1190 aa14.84□□□□□ -0.03
HDAC4-205ENST00000454542 RASAL2Q9UJF2 1139 aa14.84□□□□□ -0.03
HDAC4-205ENST00000454542 SH3BP1Q9Y3L3 701 aa14.84□□□□□ -0.03
HDAC4-205ENST00000454542 WDFY4Q6ZS81 3184 aa14.84□□□□□ -0.03
HDAC4-205ENST00000454542 PIK3R2O00459 728 aa14.83□□□□□ -0.04
HDAC4-205ENST00000454542 TRDMT1O14717 391 aaKnown RBP14.83□□□□□ -0.04
HDAC4-205ENST00000454542 LSM8O95777 96 aaKnown RBP14.83□□□□□ -0.04
HDAC4-205ENST00000454542 FYNP06241 537 aa14.83□□□□□ -0.04
HDAC4-205ENST00000454542 DCNP07585 359 aaKnown RBP14.83□□□□□ -0.04
HDAC4-205ENST00000454542 IRF1P10914 325 aa14.83□□□□□ -0.04
HDAC4-205ENST00000454542 CHRNB1P11230 501 aa14.83□□□□□ -0.04
HDAC4-205ENST00000454542 PBX1P40424 430 aa14.83□□□□□ -0.04
HDAC4-205ENST00000454542 GOLGA8FQ08AF8 430 aa14.83□□□□□ -0.04
HDAC4-205ENST00000454542 GOLGA8DPQ0D2H9 430 aa14.83□□□□□ -0.04
HDAC4-205ENST00000454542 EFEMP1Q12805 493 aa14.83□□□□□ -0.04
HDAC4-205ENST00000454542 CCINQ13939 588 aa14.83□□□□□ -0.04
HDAC4-205ENST00000454542 TMEM196Q5HYL7 178 aa14.83□□□□□ -0.04
HDAC4-205ENST00000454542 BTBD8Q5XKL5 378 aa14.83□□□□□ -0.04
HDAC4-205ENST00000454542 LRSAM1Q6UWE0 723 aa14.83□□□□□ -0.04
HDAC4-205ENST00000454542 ADGRG2Q8IZP9 1017 aa14.83□□□□□ -0.04
HDAC4-205ENST00000454542 TTC8Q8TAM2 541 aa14.83□□□□□ -0.04
HDAC4-205ENST00000454542 BAP1Q92560 729 aa14.83□□□□□ -0.04
HDAC4-205ENST00000454542 PLD4Q96BZ4 506 aa14.83□□□□□ -0.04
HDAC4-205ENST00000454542 PIWIL1Q96J94 861 aaKnown RBP14.83□□□□□ -0.04
HDAC4-205ENST00000454542 CHRDQ9H2X0 955 aa14.83□□□□□ -0.04
HDAC4-205ENST00000454542 ST7Q9NRC1 585 aa14.83□□□□□ -0.04
HDAC4-205ENST00000454542 ASNSD1Q9NWL6 643 aa14.83□□□□□ -0.04
HDAC4-205ENST00000454542 MARCH2Q9P0N8 246 aa14.83□□□□□ -0.04
HDAC4-205ENST00000454542 MYO6Q9UM54 1294 aa14.83□□□□□ -0.04
HDAC4-205ENST00000454542 HBS1LQ9Y450 684 aaKnown RBP14.83□□□□□ -0.04
HDAC4-205ENST00000454542 FAM170BA6NMN3 283 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 SCAMP3O14828 347 aaKnown RBP14.82□□□□□ -0.04
HDAC4-205ENST00000454542 HOXC11O43248 304 aaPredicted RBP14.82□□□□□ -0.04
HDAC4-205ENST00000454542 GFPT2O94808 682 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 IGLV3-25P01717 112 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 IGLV3-27P01718 113 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 KLKB1P03952 638 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 KRT9P35527 623 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 OPRD1P41143 372 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 EIF2DP41214 584 aaKnown RBP14.82□□□□□ -0.04
HDAC4-205ENST00000454542 STAT1P42224 750 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 TPM4P67936 248 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 NOMO3P69849 1222 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 COG7P83436 770 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 FANCCQ00597 558 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 FMO1Q01740 532 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 TCF15Q12870 199 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 NNTQ13423 1086 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 NR1I3Q14994 352 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 DHCR24Q15392 516 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 TRIP4Q15650 581 aaPredicted RBP14.82□□□□□ -0.04
HDAC4-205ENST00000454542 FILIP1LQ4L180 1135 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 RHBDF2Q6PJF5 856 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 OLFML1Q6UWY5 402 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 RSRC2Q7L4I2 434 aaKnown RBP14.82□□□□□ -0.04
HDAC4-205ENST00000454542 MIB1Q86YT6 1006 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 FMNL3Q8IVF7 1028 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 FAM217AQ8IXS0 508 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 DTWD2Q8NBA8 298 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 TTC16Q8NEE8 873 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 OLIG1Q8TAK6 271 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 SLC20A1Q8WUM9 679 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 EDEM1Q92611 657 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 PPP1R13BQ96KQ4 1090 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 NOX5Q96PH1 765 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 SPAG5Q96R06 1193 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 MIS12Q9H081 205 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 MARK1Q9P0L2 795 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 RAPGEFL1Q9UHV5 662 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 LSM7Q9UK45 103 aaKnown RBP14.82□□□□□ -0.04
HDAC4-205ENST00000454542 STRIP2Q9ULQ0 834 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 CEP83Q9Y592 693 aa14.82□□□□□ -0.04
HDAC4-205ENST00000454542 GFRA2O00451 464 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 NCAM2O15394 837 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 ADH1CP00326 375 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 ERBB2P04626 1255 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 CYP1A1P04798 512 aaPredicted RBP14.81□□□□□ -0.04
HDAC4-205ENST00000454542 GLI1P08151 1106 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 MMEP08473 750 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 CHRM1P11229 460 aaPredicted RBP14.81□□□□□ -0.04
HDAC4-205ENST00000454542 CHRNB2P17787 502 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 GABRB2P47870 512 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 ZNF445P59923 1031 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 AMPD2Q01433 879 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 CDR2Q01850 454 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 NR1H3Q13133 447 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 LRRC32Q14392 662 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 PON2Q15165 354 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 FIGNQ5HY92 759 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 NAIF1Q69YI7 327 aaPredicted RBP14.81□□□□□ -0.04
HDAC4-205ENST00000454542 FSTL4Q6MZW2 842 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 MAMSTRQ6ZN01 415 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 SCUBE3Q8IX30 993 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 ETFBKMTQ8IXQ9 262 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 TMEM35BQ8NCS4 154 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms