RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 TRIM16LQ309B1 348 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 ZBED5Q49AG3 693 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 VWA5B1Q5TIE3 1220 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 KRT80Q6KB66 452 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 POTEAQ6S8J7 498 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 KRT28Q7Z3Y7 464 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 KATNAL2Q8IYT4 538 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 FIBCD1Q8N539 461 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 CMTM5Q96DZ9 223 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 CTRCQ99895 268 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 TMEM79Q9BSE2 394 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 EXOC7Q9UPT5 735 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 ZNFX1Q9P2E3 1918 aaKnown RBP19.27■□□□□ 0.68
PTPA-223ENST00000452489 TMEM114B3SHH9 223 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 CFAP99D6REC4 459 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 PROSCO94903 275 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 ESRRBO95718 433 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 P4HA1P13674 534 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 IREB2P48200 963 aaKnown RBP19.27■□□□□ 0.68
PTPA-223ENST00000452489 TXNL4AP83876 142 aaKnown RBP19.27■□□□□ 0.68
PTPA-223ENST00000452489 PTP4A2Q12974 167 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 IL23RQ5VWK5 629 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 PDPK2PQ6A1A2 396 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 CARM1Q86X55 608 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 CADM3Q8N126 398 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 RNF148Q8N7C7 305 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 DDX1Q92499 740 aaKnown RBP19.27■□□□□ 0.68
PTPA-223ENST00000452489 EYA3Q99504 573 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 STK39Q9UEW8 545 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 SNCAIPQ9Y6H5 919 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 ZNF142P52746 1687 aaPredicted RBP19.27■□□□□ 0.68
PTPA-223ENST00000452489 USP17L15C9J2P7 530 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 USP17L13C9JLJ4 530 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 USP17L11C9JVI0 530 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 USP17L18D6R9N7 530 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 USP17L22D6RA61 530 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 USP17L17D6RBQ6 530 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 USP17L19D6RCP7 530 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 USP17L20D6RJB6 530 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 TOM1L1O75674 476 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 BMP10O95393 424 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 THOP1P52888 689 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 ESRRGP62508 458 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 TUBA4AP68366 448 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 OTUD4Q01804 1114 aaKnown RBP19.27■□□□□ 0.68
PTPA-223ENST00000452489 USP17L24Q0WX57 530 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 RINT1Q6NUQ1 792 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 USP17L6PQ6QN14 398 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 MYO1HQ8N1T3 1032 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 SAMD3Q8N6K7 520 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 WNK4Q96J92 1243 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 NAA50Q9GZZ1 169 aaKnown RBP19.27■□□□□ 0.68
PTPA-223ENST00000452489 KLHL3Q9UH77 587 aa19.27■□□□□ 0.68
PTPA-223ENST00000452489 PSTPIP1O43586 416 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 TMEM63AO94886 807 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 NR4A1P22736 598 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 JAK1P23458 1154 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 CCT8P50990 548 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 HSD17B4P51659 736 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 EIF3EP60228 445 aaKnown RBP19.26■□□□□ 0.67
PTPA-223ENST00000452489 BMPR2Q13873 1038 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 MYBPC2Q14324 1141 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 GPR107Q5VW38 600 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 ANKRD26P1Q6NSI1 321 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 POLNQ7Z5Q5 900 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 TMEM126BQ8IUX1 230 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 MCOLN2Q8IZK6 566 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 ZSWIM2Q8NEG5 633 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 BHLHE22Q8NFJ8 381 aaPredicted RBP19.26■□□□□ 0.67
PTPA-223ENST00000452489 EXD1Q8NHP7 514 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 ZCRB1Q8TBF4 217 aaKnown RBP19.26■□□□□ 0.67
PTPA-223ENST00000452489 FERMT1Q9BQL6 677 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 KLHL25Q9H0H3 589 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 SEMA6AQ9H2E6 1030 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 ARHGAP26Q9UNA1 814 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 SNX9Q9Y5X1 595 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 hCG_1984214I3L0E3 225 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 DCXO43602 365 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 KLHL41O60662 606 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 S100BP04271 92 aaPredicted RBP19.26■□□□□ 0.67
PTPA-223ENST00000452489 GDF10P55107 478 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 CETN1Q12798 172 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 MOGQ16653 247 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 C1orf220Q5T0J3 134 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 MFSD7Q6UXD7 560 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 EEPD1Q7L9B9 569 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 PEX5LQ8IYB4 626 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 TMEM102Q8N9M5 508 aaPredicted RBP19.26■□□□□ 0.67
PTPA-223ENST00000452489 SHC3Q92529 594 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 ACSF2Q96CM8 615 aaPredicted RBP19.26■□□□□ 0.67
PTPA-223ENST00000452489 DKK3Q9UBP4 350 aa19.26■□□□□ 0.67
PTPA-223ENST00000452489 NOP56O00567 594 aaKnown RBP19.25■□□□□ 0.67
PTPA-223ENST00000452489 ZBTB39O15060 712 aa19.25■□□□□ 0.67
PTPA-223ENST00000452489 RNASEH2AO75792 299 aaKnown RBP19.25■□□□□ 0.67
PTPA-223ENST00000452489 STARD3NLO95772 234 aa19.25■□□□□ 0.67
PTPA-223ENST00000452489 COX4I1P13073 169 aa19.25■□□□□ 0.67
PTPA-223ENST00000452489 FGFR3P22607 806 aa19.25■□□□□ 0.67
PTPA-223ENST00000452489 ACAT1P24752 427 aaKnown RBP19.25■□□□□ 0.67
PTPA-223ENST00000452489 MS4A2Q01362 244 aa19.25■□□□□ 0.67
PTPA-223ENST00000452489 MGAT5BQ3V5L5 792 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms