RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 GNL1P36915 607 aaPredicted RBP12.55□□□□□ -0.4
COL27A1-202ENST00000451716 BCAR1P56945 870 aa12.55□□□□□ -0.4
COL27A1-202ENST00000451716 SLC8A3P57103 927 aa12.55□□□□□ -0.4
COL27A1-202ENST00000451716 ARHGAP22Q7Z5H3 698 aa12.55□□□□□ -0.4
COL27A1-202ENST00000451716 PDIK1LQ8N165 341 aa12.55□□□□□ -0.4
COL27A1-202ENST00000451716 SLC2A14Q8TDB8 520 aa12.55□□□□□ -0.4
COL27A1-202ENST00000451716 USP29Q9HBJ7 922 aa12.55□□□□□ -0.4
COL27A1-202ENST00000451716 RAB6BQ9NRW1 208 aa12.55□□□□□ -0.4
COL27A1-202ENST00000451716 HAUS2Q9NVX0 235 aa12.55□□□□□ -0.4
COL27A1-202ENST00000451716 CNTN3Q9P232 1028 aa12.55□□□□□ -0.4
COL27A1-202ENST00000451716 MBLAC1A4D2B0 266 aaPredicted RBP12.55□□□□□ -0.4
COL27A1-202ENST00000451716 KPNA7A9QM74 516 aa12.55□□□□□ -0.4
COL27A1-202ENST00000451716 ZNF189O75820 626 aaPredicted RBP12.55□□□□□ -0.4
COL27A1-202ENST00000451716 ELK3P41970 407 aa12.55□□□□□ -0.4
COL27A1-202ENST00000451716 RABGGTBP53611 331 aa12.55□□□□□ -0.4
COL27A1-202ENST00000451716 CGB2Q6NT52 195 aa12.55□□□□□ -0.4
COL27A1-202ENST00000451716 TLDC1Q6P9B6 456 aa12.55□□□□□ -0.4
COL27A1-202ENST00000451716 SLC30A9Q6PML9 568 aa12.55□□□□□ -0.4
COL27A1-202ENST00000451716 C2orf69Q8N8R5 385 aa12.55□□□□□ -0.4
COL27A1-202ENST00000451716 FAF2Q96CS3 445 aa12.55□□□□□ -0.4
COL27A1-202ENST00000451716 FRMD8P1Q9BZ68 369 aaPredicted RBP12.55□□□□□ -0.4
COL27A1-202ENST00000451716 DHX35Q9H5Z1 703 aaKnown RBP12.55□□□□□ -0.4
COL27A1-202ENST00000451716 SMIM35A0A1B0GVV1 85 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 SLC15A5A6NIM6 579 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 F5H423 210 aaPredicted RBP12.54□□□□□ -0.4
COL27A1-202ENST00000451716 CLDN5O00501 218 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 EZRP15311 586 aaKnown RBP12.54□□□□□ -0.4
COL27A1-202ENST00000451716 KRT4P19013 534 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 TAC1P20366 129 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 CA4P22748 312 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 ACAT1P24752 427 aaKnown RBP12.54□□□□□ -0.4
COL27A1-202ENST00000451716 CA8P35219 290 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 GEMIN4P57678 1058 aaKnown RBP12.54□□□□□ -0.4
COL27A1-202ENST00000451716 DNAJC3Q13217 504 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 TFDP2Q14188 446 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 STILQ15468 1287 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 SLC1A5Q15758 541 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 TRPM8Q7Z2W7 1104 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 MAP7D3Q8IWC1 876 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 AGGF1Q8N302 714 aaeCLIP12.54□□□□□ -0.4
COL27A1-202ENST00000451716 RIBC1Q8N443 379 aaPredicted RBP12.54□□□□□ -0.4
COL27A1-202ENST00000451716 TTC39CQ8N584 583 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 LRRC52Q8N7C0 313 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 ATP11CQ8NB49 1132 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 CCDC110Q8TBZ0 833 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 ZFP42Q96MM3 310 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 SMC6Q96SB8 1091 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 PAFAH2Q99487 392 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 YIPF3Q9GZM5 350 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 SLCO1B3Q9NPD5 702 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 SPATA7Q9P0W8 599 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 PSMC3IPQ9P2W1 217 aaPredicted RBP12.54□□□□□ -0.4
COL27A1-202ENST00000451716 UBQLN1Q9UMX0 589 aaKnown RBP12.54□□□□□ -0.4
COL27A1-202ENST00000451716 MFHAS1Q9Y4C4 1052 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 USP15Q9Y4E8 981 aaPredicted RBP12.54□□□□□ -0.4
COL27A1-202ENST00000451716 SYNJ2BP-COX16A0A087WUM0 186 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 MEIS3P2A8K0S8 358 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 IGF2BP3O00425 579 aaKnown RBP eCLIP12.54□□□□□ -0.4
COL27A1-202ENST00000451716 PIRO00625 290 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 APOL1O14791 398 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 ZNF865P0CJ78 1059 aaPredicted RBP12.54□□□□□ -0.4
COL27A1-202ENST00000451716 TKTP29401 623 aaKnown RBP12.54□□□□□ -0.4
COL27A1-202ENST00000451716 PSEN2P49810 448 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 GBE1Q04446 702 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 ITIH4Q14624 930 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 BOLA3Q53S33 107 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 CAPRIN2Q6IMN6 1127 aaKnown RBP12.54□□□□□ -0.4
COL27A1-202ENST00000451716 APBB1IPQ7Z5R6 666 aaPredicted RBP12.54□□□□□ -0.4
COL27A1-202ENST00000451716 TDRPQ86YL5 185 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 PYROXD2Q8N2H3 581 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 COX16Q9P0S2 106 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 ZMYND8Q9ULU4 1186 aaPredicted RBP12.54□□□□□ -0.4
COL27A1-202ENST00000451716 DERAQ9Y315 318 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 HTTP42858 3142 aa12.54□□□□□ -0.4
COL27A1-202ENST00000451716 ASMTLO95671 621 aa12.53□□□□□ -0.4
COL27A1-202ENST00000451716 OAS1P00973 400 aaKnown RBP12.53□□□□□ -0.4
COL27A1-202ENST00000451716 STIP1P31948 543 aaKnown RBP12.53□□□□□ -0.4
COL27A1-202ENST00000451716 RNASELQ05823 741 aaKnown RBP12.53□□□□□ -0.4
COL27A1-202ENST00000451716 MAP2K5Q13163 448 aa12.53□□□□□ -0.4
COL27A1-202ENST00000451716 FAM47CQ5HY64 1035 aa12.53□□□□□ -0.4
COL27A1-202ENST00000451716 EFHC2Q5JST6 749 aa12.53□□□□□ -0.4
COL27A1-202ENST00000451716 UBXN11Q5T124 520 aa12.53□□□□□ -0.4
COL27A1-202ENST00000451716 PPP1R21Q6ZMI0 780 aa12.53□□□□□ -0.4
COL27A1-202ENST00000451716 CCDC185Q8N715 623 aa12.53□□□□□ -0.4
COL27A1-202ENST00000451716 MAGEB18Q96M61 343 aa12.53□□□□□ -0.4
COL27A1-202ENST00000451716 TRIM56Q9BRZ2 755 aaKnown RBP12.53□□□□□ -0.4
COL27A1-202ENST00000451716 ZCWPW1Q9H0M4 648 aa12.53□□□□□ -0.4
COL27A1-202ENST00000451716 SNX25Q9H3E2 840 aa12.53□□□□□ -0.4
COL27A1-202ENST00000451716 SLC40A1Q9NP59 571 aa12.53□□□□□ -0.4
COL27A1-202ENST00000451716 TMPRSS4Q9NRS4 437 aa12.53□□□□□ -0.4
COL27A1-202ENST00000451716 ACTL7BQ9Y614 415 aa12.53□□□□□ -0.4
COL27A1-202ENST00000451716 LAMA3Q16787 3333 aa12.53□□□□□ -0.4
COL27A1-202ENST00000451716 KBTBD13C9JR72 458 aa12.53□□□□□ -0.4
COL27A1-202ENST00000451716 APRTP07741 180 aa12.53□□□□□ -0.4
COL27A1-202ENST00000451716 YWHAGP61981 247 aaKnown RBP eCLIP12.53□□□□□ -0.4
COL27A1-202ENST00000451716 PITX1P78337 314 aaPredicted RBP12.53□□□□□ -0.4
COL27A1-202ENST00000451716 IL9RQ01113 521 aa12.53□□□□□ -0.4
COL27A1-202ENST00000451716 SLC10A2Q12908 348 aaPredicted RBP12.53□□□□□ -0.4
COL27A1-202ENST00000451716 LRRC23Q53EV4 343 aaPredicted RBP12.53□□□□□ -0.4
COL27A1-202ENST00000451716 ANKRD52Q8NB46 1076 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms