RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 VSIG1Q86XK7 387 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 TMEM86AQ8N2M4 240 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 TAB3Q8N5C8 712 aaPredicted RBP16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 PLD5Q8N7P1 536 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 CENPIQ92674 756 aaPredicted RBP16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 PCED1BQ96HM7 432 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 MAGEB5Q9BZ81 275 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 RGS18Q9NS28 235 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 SQORQ9Y6N5 450 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 EXOC1LA0A1B0GW35 172 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 C9IYK1 514 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 ANKRD65E5RJM6 399 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 FAM163BP0C2L3 166 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 CREB1P16220 341 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 NRLP54845 237 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 GAD2Q05329 585 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 TUSC3Q13454 348 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 PPP6R3Q5H9R7 873 aaPredicted RBP16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 CYP4X1Q8N118 509 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 PQLC3Q8N755 202 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 PCDH19Q8TAB3 1148 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 CHMP6Q96FZ7 201 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 KCNK16Q96T55 309 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 ZNF670Q9BS34 389 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 PHF24Q9UPV7 400 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 FAM169AQ9Y6X4 670 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 FOXO6A8MYZ6 492 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 MYO1CO00159 1063 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 APOL1O14791 398 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 AP1G2O75843 785 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 FAM200BP0CF97 657 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 TGM2P21980 687 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 BCAR1P56945 870 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 CLLU1OSQ5K130 101 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 SLC9A4Q6AI14 798 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 CTU1Q7Z7A3 348 aaKnown RBP16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 FAM35AQ86V20 835 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 SPATS2Q86XZ4 545 aaKnown RBP16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 ZNF280BQ86YH2 543 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 FAM149B1Q96BN6 582 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 SMOQ99835 787 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 PRMT1Q99873 361 aaKnown RBP16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 PHACTR1Q9C0D0 580 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 VPS37BQ9H9H4 285 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 EURLQ9NYK6 297 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 HEY1Q9Y5J3 304 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 TMEM120BA0PK00 339 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 KBTBD13C9JR72 458 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 H7C0C1 242 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 BANF1O75531 89 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 SKIP12755 728 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 ATP5OP48047 213 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 ARL4CP56559 192 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 SLC8A3P57103 927 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 PITX1P78337 314 aaPredicted RBP16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 BASP1P80723 227 aaKnown RBP16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 QPCTQ16769 361 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 FAM182AQ5T1J6 154 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 CAPN12Q6ZSI9 719 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 GPRIN1Q7Z2K8 1008 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 CCDC13Q8IYE1 715 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 DEFB106AQ8N104 65 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 RIBC1Q8N443 379 aaPredicted RBP16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 ZMIZ2Q8NF64 920 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 TMEM209Q96SK2 561 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 UBN1Q9NPG3 1134 aa16.73■□□□□ 0.27
AP000253.1-201ENST00000449339 TCRBV7S3A2A0A539 114 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 SMAPO00193 183 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 DDHD2O94830 711 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 TMEM63AO94886 807 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 ODC1P11926 461 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 DPYSL2Q16555 572 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 EFHC1Q5JVL4 640 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 FNBP1LQ5T0N5 605 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 VSTM1Q6UX27 236 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 HFE2Q6ZVN8 426 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 SLC24A5Q71RS6 500 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 CPLX4Q7Z7G2 160 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 ANKMY2Q8IV38 441 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 FAF2Q96CS3 445 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 ZNF317Q96PQ6 595 aaPredicted RBP16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 LRRC4Q9HBW1 653 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 XPO7Q9UIA9 1087 aaKnown RBP16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 CDH9Q9ULB4 789 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 C5orf60A6NFR6 353 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 CAPN15O75808 1086 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 GCAP28676 217 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 L1CAMP32004 1257 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 TKTL1P51854 596 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 MRPS5P82675 430 aaKnown RBP16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 MTFR1Q15390 333 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 MSS51Q4VC12 460 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 LRRC8DQ7L1W4 858 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 RSPH1Q8WYR4 309 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 MYLPFQ96A32 169 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 CCDC134Q9H6E4 229 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 USP29Q9HBJ7 922 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 TMLHEQ9NVH6 421 aa16.72■□□□□ 0.27
AP000253.1-201ENST00000449339 TET1Q8NFU7 2136 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms