RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 ZRANB3Q5FWF4 1079 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 SH2D4BQ5SQS7 431 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 C1orf127Q8N9H9 656 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 FBXO25Q8TCJ0 367 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 APOL2Q9BQE5 337 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 UBXN6Q9BZV1 441 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 RBM22Q9NW64 420 aaKnown RBP eCLIP7.65□□□□□ -1.18
SYNE1-213ENST00000448038 SMG5Q9UPR3 1016 aaKnown RBP7.65□□□□□ -1.18
SYNE1-213ENST00000448038 IRS2Q9Y4H2 1338 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 A0A0U1RQJ8 604 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 RARAP10276 462 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 GFAPP14136 432 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 APLP1P51693 650 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 ART3Q13508 389 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 MORF4L2Q15014 288 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 ACAD11Q709F0 780 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 CNPY4Q8N129 248 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 CIPCQ9C0C6 399 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 DRC3Q9H069 523 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.65□□□□□ -1.18
SYNE1-213ENST00000448038 FZD8Q9H461 694 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 SCUBE2Q9NQ36 999 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 PCMTD2Q9NV79 361 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 CCDC160A6NGH7 325 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 SDR42E2A6NKP2 422 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 RNF225M0QZC1 329 aaPredicted RBP7.65□□□□□ -1.18
SYNE1-213ENST00000448038 CES2O00748 559 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 DCTN3O75935 186 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 TRUB2O95900 331 aaKnown RBP7.65□□□□□ -1.18
SYNE1-213ENST00000448038 HSD17B3P37058 310 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 ZNF143P52747 638 aaPredicted RBP7.65□□□□□ -1.18
SYNE1-213ENST00000448038 RHOAP61586 193 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 FSTL1Q12841 308 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 PSMD5Q16401 504 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 DBN1Q16643 649 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 PABPC1LQ4VXU2 614 aaKnown RBP7.65□□□□□ -1.18
SYNE1-213ENST00000448038 LGI2Q8N0V4 545 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 TTC30BQ8N4P2 665 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 COLGALT1Q8NBJ5 622 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 ZBED3Q96IU2 234 aaPredicted RBP7.65□□□□□ -1.18
SYNE1-213ENST00000448038 LRGUKQ96M69 825 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 FAM96AQ9H5X1 160 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 IGFLR1Q9H665 355 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 TXLNGQ9NUQ3 528 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 SLC27A5Q9Y2P5 690 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 PTCH2Q9Y6C5 1203 aa7.65□□□□□ -1.18
SYNE1-213ENST00000448038 MYH1P12882 1939 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 PARNO95453 639 aaKnown RBP7.65□□□□□ -1.19
SYNE1-213ENST00000448038 ATP5C1P36542 298 aaKnown RBP7.65□□□□□ -1.19
SYNE1-213ENST00000448038 PTK6Q13882 451 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 HABP4Q5JVS0 413 aaKnown RBP7.65□□□□□ -1.19
SYNE1-213ENST00000448038 PTRHD1Q6GMV3 140 aaKnown RBP7.65□□□□□ -1.19
SYNE1-213ENST00000448038 SAPCD2Q86UD0 394 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 KATNAL2Q8IYT4 538 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 FBXO36Q8NEA4 188 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 APBB2Q92870 758 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 SH3KBP1Q96B97 665 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 KLF6Q99612 283 aaPredicted RBP7.65□□□□□ -1.19
SYNE1-213ENST00000448038 CEP41Q9BYV8 373 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 PABPC3Q9H361 631 aaKnown RBP7.65□□□□□ -1.19
SYNE1-213ENST00000448038 PCDH9Q9HC56 1237 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 DMAC2Q9NW81 257 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 Q9Y3F1 56 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 MRPL42Q9Y6G3 142 aaKnown RBP7.65□□□□□ -1.19
SYNE1-213ENST00000448038 RCCD1A6NED2 376 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 TLL1O43897 1013 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 DIAPH2O60879 1101 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 PPM1AP35813 382 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 GUCY1A3Q02108 690 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 IMPG1Q17R60 797 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 TSNAXIP1Q2TAA8 658 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 MARC1Q5VT66 337 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 WDR93Q6P2C0 686 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 CCDC149Q6ZUS6 474 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 ZSWIM2Q8NEG5 633 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 UBP1Q9NZI7 540 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 CPSF2Q9P2I0 782 aaKnown RBP7.65□□□□□ -1.19
SYNE1-213ENST00000448038 BAG5Q9UL15 447 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 VANGL2Q9ULK5 521 aa7.65□□□□□ -1.19
SYNE1-213ENST00000448038 C2orf81A6NN90 581 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 TXNDC9O14530 226 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 EFCAB14O75071 495 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 KDELR1P24390 212 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 ADSSP30520 456 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 NR2C2P49116 596 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 THEMIS2Q5TEJ8 643 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 TTC39BQ5VTQ0 682 aaPredicted RBP7.64□□□□□ -1.19
SYNE1-213ENST00000448038 FAM35AQ86V20 835 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 NUP93Q8N1F7 819 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 LZTR1Q8N653 840 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 TSSK1BQ9BXA7 367 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 VCX3BQ9H321 246 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 LATS2Q9NRM7 1088 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 SUN2Q9UH99 717 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 A0A1B0GUA9 196 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 E2F8A0AVK6 867 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 CFAP99D6REC4 459 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 SNAI1O95863 264 aaPredicted RBP7.64□□□□□ -1.19
SYNE1-213ENST00000448038 GLI1P08151 1106 aa7.64□□□□□ -1.19
SYNE1-213ENST00000448038 RALBP11234 206 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms