RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 ZFP37Q9Y6Q3 630 aaPredicted RBP4.16□□□□□ -1.74
PMS1-216ENST00000447734 SLC38A8A6NNN8 435 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 A8MV72 311 aaPredicted RBP4.15□□□□□ -1.75
PMS1-216ENST00000447734 TMEM232C9JQI7 657 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 E9PLN8 166 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 H0Y626 953 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 DCLK1O15075 740 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 PJA2O43164 708 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 KNG1P01042 644 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 POMCP01189 267 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 LMNAP02545 664 aaKnown RBP4.15□□□□□ -1.75
PMS1-216ENST00000447734 QDPRP09417 244 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 VSIG10L2P0DP72 767 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 YY1P25490 414 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 ATP5DP30049 168 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 LRPAP1P30533 357 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 GPD2P43304 727 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 PRKAG1P54619 331 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 BPIFB4P59827 614 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 UBXN2AP68543 259 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 ADAM17P78536 824 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 TCF15Q12870 199 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 AIMP1Q12904 312 aaKnown RBP4.15□□□□□ -1.75
PMS1-216ENST00000447734 MYO1EQ12965 1108 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 TOP3AQ13472 1001 aaPredicted RBP4.15□□□□□ -1.75
PMS1-216ENST00000447734 COG2Q14746 738 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 PCOLCEQ15113 449 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 KYNUQ16719 465 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 ZIK1Q3SY52 487 aaPredicted RBP4.15□□□□□ -1.75
PMS1-216ENST00000447734 TBRG1Q3YBR2 411 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 ODF2Q5BJF6 829 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 CBWD5Q5RIA9 395 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 TRIM68Q6AZZ1 485 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 DENND1BQ6P3S1 775 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 LAYNQ6UX15 382 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 ZFPM1Q8IX07 1006 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 CCDC105Q8IYK2 499 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 SPARTQ8N0X7 666 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 LRRC71Q8N4P6 559 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 WDTC1Q8N5D0 677 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 FRMD1Q8N878 549 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 PDPRQ8NCN5 879 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 LSM14AQ8ND56 463 aaKnown RBP4.15□□□□□ -1.75
PMS1-216ENST00000447734 APPL2Q8NEU8 664 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 MBD3L2Q8NHZ7 208 aaPredicted RBP4.15□□□□□ -1.75
PMS1-216ENST00000447734 SLC35B2Q8TB61 432 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 DNAJB14Q8TBM8 379 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 LPPQ93052 612 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 KLHL32Q96NJ5 620 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 NR1H4Q96RI1 486 aaPredicted RBP4.15□□□□□ -1.75
PMS1-216ENST00000447734 VKORC1Q9BQB6 163 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 SYT3Q9BQG1 590 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 MECRQ9BV79 373 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 C2orf40Q9H1Z8 148 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 ERVMER34-1Q9H9K5 563 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 PCDH18Q9HCL0 1135 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 PDE7BQ9NP56 450 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 ALKBH4Q9NXW9 302 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 TAB2Q9NYJ8 693 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 KLHL14Q9P2G3 628 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 LIMA1Q9UHB6 759 aaKnown RBP4.15□□□□□ -1.75
PMS1-216ENST00000447734 GTF3C4Q9UKN8 822 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 FAM169AQ9Y6X4 670 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 KDM3AQ9Y4C1 1321 aa4.15□□□□□ -1.75
PMS1-216ENST00000447734 GPRASP1Q5JY77 1395 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 A0A1W2PQ09 198 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 C19orf81C9J6K1 198 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 CD3EAPO15446 510 aaKnown RBP4.14□□□□□ -1.75
PMS1-216ENST00000447734 ADAM20O43506 726 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 TNFSF14O43557 240 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 HTATSF1O43719 755 aaKnown RBP4.14□□□□□ -1.75
PMS1-216ENST00000447734 CYP7B1O75881 506 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 KRT1P04264 644 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 FAM200BP0CF97 657 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 CHRM3P20309 590 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 EEF1DP29692 281 aaKnown RBP4.14□□□□□ -1.75
PMS1-216ENST00000447734 NTSR1P30989 418 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 GRK5P34947 590 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 GDNFP39905 211 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 ARL1P40616 181 aaPredicted RBP4.14□□□□□ -1.75
PMS1-216ENST00000447734 CTCFP49711 727 aaPredicted RBP4.14□□□□□ -1.75
PMS1-216ENST00000447734 MRE11P49959 708 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 CDH15P55291 814 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 LOXL3P58215 753 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 CLRN1P58418 232 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 LILRA4P59901 499 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 TMF1P82094 1093 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 RBP5P82980 135 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 NEXNQ0ZGT2 675 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 BFSP1Q12934 665 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 BOP1Q14137 746 aaKnown RBP4.14□□□□□ -1.75
PMS1-216ENST00000447734 RTP5Q14D33 572 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 MED22Q15528 200 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 NRN1LQ496H8 165 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 LRRC24Q50LG9 513 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 PLEKHS1Q5SXH7 462 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 ZNF362Q5T0B9 420 aaPredicted RBP4.14□□□□□ -1.75
PMS1-216ENST00000447734 KAZNQ674X7 775 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 TRMT10BQ6PF06 316 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms