RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 MAP3K14Q99558 947 aa1.31□□□□□ -2.2
SNHG3-203ENST00000447507 SMAD5Q99717 465 aaKnown RBP1.31□□□□□ -2.2
SNHG3-203ENST00000447507 TM2D2Q9BX73 214 aa1.31□□□□□ -2.2
SNHG3-203ENST00000447507 GTPBP4Q9BZE4 634 aaKnown RBP1.31□□□□□ -2.2
SNHG3-203ENST00000447507 TRIM5Q9C035 493 aa1.31□□□□□ -2.2
SNHG3-203ENST00000447507 ARMT1Q9H993 441 aa1.31□□□□□ -2.2
SNHG3-203ENST00000447507 USP29Q9HBJ7 922 aa1.31□□□□□ -2.2
SNHG3-203ENST00000447507 PAPOLBQ9NRJ5 636 aaKnown RBP1.31□□□□□ -2.2
SNHG3-203ENST00000447507 WNT16Q9UBV4 365 aa1.31□□□□□ -2.2
SNHG3-203ENST00000447507 STAP2Q9UGK3 403 aa1.31□□□□□ -2.2
SNHG3-203ENST00000447507 ANAPC4Q9UJX5 808 aa1.31□□□□□ -2.2
SNHG3-203ENST00000447507 RIMKLBQ9ULI2 386 aa1.31□□□□□ -2.2
SNHG3-203ENST00000447507 FZD4Q9ULV1 537 aa1.31□□□□□ -2.2
SNHG3-203ENST00000447507 TNKSO95271 1327 aa1.31□□□□□ -2.2
SNHG3-203ENST00000447507 ZNF335Q9H4Z2 1342 aaPredicted RBP1.31□□□□□ -2.2
SNHG3-203ENST00000447507 TRIP12Q14669 1992 aaPredicted RBP1.3□□□□□ -2.2
SNHG3-203ENST00000447507 EVPLQ92817 2033 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 TRBV5-3A0A0A0MS03 114 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 A0A0G2JK05 382 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 LOC102723971A0A1B0GUV8 181 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 A0A1W2PPL8 197 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 ALG1L2C9J202 215 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 BTN3A1O00481 513 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 CCP110O43303 1012 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 RRP9O43818 475 aaKnown RBP1.3□□□□□ -2.2
SNHG3-203ENST00000447507 PRAMEF2O60811 474 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 ZNF432O94892 652 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 PAPSS2O95340 614 aaPredicted RBP1.3□□□□□ -2.2
SNHG3-203ENST00000447507 PLGP00747 810 aaPredicted RBP1.3□□□□□ -2.2
SNHG3-203ENST00000447507 ALDH2P05091 517 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 ACAA1P09110 424 aaPredicted RBP1.3□□□□□ -2.2
SNHG3-203ENST00000447507 HGFP14210 728 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 CD19P15391 556 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 ST6GAL1P15907 406 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 NPR1P16066 1061 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 TFEBP19484 476 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 CDK11BP21127 795 aaKnown RBP1.3□□□□□ -2.2
SNHG3-203ENST00000447507 AKAP5P24588 427 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 HOXA7P31268 230 aaPredicted RBP1.3□□□□□ -2.2
SNHG3-203ENST00000447507 HOXA11P31270 313 aaPredicted RBP1.3□□□□□ -2.2
SNHG3-203ENST00000447507 MLH1P40692 756 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 CDKN1CP49918 316 aaPredicted RBP1.3□□□□□ -2.2
SNHG3-203ENST00000447507 PGDP52209 483 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 WDR5P61964 334 aaKnown RBP1.3□□□□□ -2.2
SNHG3-203ENST00000447507 DEUP1Q05D60 604 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 CCDC15Q0P6D6 951 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 SLC13A2Q13183 592 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 MTA1Q13330 715 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 FAM50AQ14320 339 aaKnown RBP1.3□□□□□ -2.2
SNHG3-203ENST00000447507 ODF3L2Q3SX64 289 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 WASHC2DQ5SRD0 308 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 OTUD3Q5T2D3 398 aaPredicted RBP1.3□□□□□ -2.2
SNHG3-203ENST00000447507 LCE3AQ5TA76 89 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 GIMAP6Q6P9H5 292 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 RBM44Q6ZP01 1051 aaKnown RBP1.3□□□□□ -2.2
SNHG3-203ENST00000447507 SRGAP1Q7Z6B7 1085 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 TFAP2DQ7Z6R9 452 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 RBM23Q86U06 439 aaKnown RBP1.3□□□□□ -2.2
SNHG3-203ENST00000447507 MORC1Q86VD1 984 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 SKAP1Q86WV1 359 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 UEVLDQ8IX04 471 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 CHPFQ8IZ52 775 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 ADGRF4Q8IZF3 695 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 PLBD2Q8NHP8 589 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 ELP5Q8TE02 316 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 OIT3Q8WWZ8 545 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 LPAR1Q92633 364 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 SPSB4Q96A44 273 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 HSPBAP1Q96EW2 488 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 VPS50Q96JG6 964 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 ZNF668Q96K58 619 aaPredicted RBP1.3□□□□□ -2.2
SNHG3-203ENST00000447507 CGRRF1Q99675 332 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 CINPQ9BW66 212 aaPredicted RBP1.3□□□□□ -2.2
SNHG3-203ENST00000447507 DPH1Q9BZG8 443 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 SPC25Q9HBM1 224 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 MLXIPLQ9NP71 852 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 FZD3Q9NPG1 666 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 XPNPEP3Q9NQH7 507 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 PLSCR4Q9NRQ2 329 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 THSD1Q9NS62 852 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 DNMT3BQ9UBC3 853 aaKnown RBP1.3□□□□□ -2.2
SNHG3-203ENST00000447507 NKX1-2Q9UD57 310 aaPredicted RBP1.3□□□□□ -2.2
SNHG3-203ENST00000447507 STEAP1Q9UHE8 339 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 AGO2Q9UKV8 859 aaKnown RBP1.3□□□□□ -2.2
SNHG3-203ENST00000447507 ASAP1Q9ULH1 1129 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 MYO6Q9UM54 1294 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 SPEF1Q9Y4P9 236 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 SPATA31A1Q5TZJ5 1347 aa1.3□□□□□ -2.2
SNHG3-203ENST00000447507 NOTCH3Q9UM47 2321 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 A0A088AWK7 358 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP1.29□□□□□ -2.2
SNHG3-203ENST00000447507 A0A1W2PPC1 479 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 MBD3L4A6NDZ8 208 aaPredicted RBP1.29□□□□□ -2.2
SNHG3-203ENST00000447507 MBD3L3A6NE82 208 aaPredicted RBP1.29□□□□□ -2.2
SNHG3-203ENST00000447507 TMEM233B4DJY2 109 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 H0YGN5 161 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 H7C4K7 107 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 PODXLO00592 558 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 PRPF4O43172 522 aaKnown RBP eCLIP1.29□□□□□ -2.2
SNHG3-203ENST00000447507 PHGDHO43175 533 aaKnown RBP1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms