RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 PM20D1Q6GTS8 502 aa21.81■■□□□ 1.08
SDC1-205ENST00000447124 ANO7Q6IWH7 933 aa21.81■■□□□ 1.08
SDC1-205ENST00000447124 TPGS1Q6ZTW0 290 aa21.81■■□□□ 1.08
SDC1-205ENST00000447124 BHLHA9Q7RTU4 235 aa21.81■■□□□ 1.08
SDC1-205ENST00000447124 MIB1Q86YT6 1006 aa21.81■■□□□ 1.08
SDC1-205ENST00000447124 MDGA1Q8NFP4 955 aa21.81■■□□□ 1.08
SDC1-205ENST00000447124 KAT5Q92993 513 aa21.81■■□□□ 1.08
SDC1-205ENST00000447124 TSPAN16Q9UKR8 245 aa21.81■■□□□ 1.08
SDC1-205ENST00000447124 NCOR2Q9Y618 2525 aa21.81■■□□□ 1.08
SDC1-205ENST00000447124 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.8■■□□□ 1.08
SDC1-205ENST00000447124 DCDC2BA2VCK2 349 aa21.8■■□□□ 1.08
SDC1-205ENST00000447124 RNF225M0QZC1 329 aaPredicted RBP21.8■■□□□ 1.08
SDC1-205ENST00000447124 CISD3P0C7P0 127 aa21.8■■□□□ 1.08
SDC1-205ENST00000447124 RALAP11233 206 aa21.8■■□□□ 1.08
SDC1-205ENST00000447124 TKTL1P51854 596 aa21.8■■□□□ 1.08
SDC1-205ENST00000447124 STX17P56962 302 aa21.8■■□□□ 1.08
SDC1-205ENST00000447124 SF3A2Q15428 464 aaKnown RBP21.8■■□□□ 1.08
SDC1-205ENST00000447124 GOLGA7BQ2TAP0 167 aa21.8■■□□□ 1.08
SDC1-205ENST00000447124 CCDC40Q4G0X9 1142 aa21.8■■□□□ 1.08
SDC1-205ENST00000447124 PLA2G2CQ5R387 149 aa21.8■■□□□ 1.08
SDC1-205ENST00000447124 UBA3Q8TBC4 463 aa21.8■■□□□ 1.08
SDC1-205ENST00000447124 TFAP2BQ92481 460 aa21.8■■□□□ 1.08
SDC1-205ENST00000447124 CNOT6LQ96LI5 555 aaKnown RBP21.8■■□□□ 1.08
SDC1-205ENST00000447124 MARK1Q9P0L2 795 aa21.8■■□□□ 1.08
SDC1-205ENST00000447124 LSM7Q9UK45 103 aaKnown RBP21.8■■□□□ 1.08
SDC1-205ENST00000447124 CDV3Q9UKY7 258 aaKnown RBP21.8■■□□□ 1.08
SDC1-205ENST00000447124 ZNF806P0C7X5 589 aa21.79■■□□□ 1.08
SDC1-205ENST00000447124 VDRP11473 427 aa21.79■■□□□ 1.08
SDC1-205ENST00000447124 TYRP14679 529 aa21.79■■□□□ 1.08
SDC1-205ENST00000447124 CD19P15391 556 aa21.79■■□□□ 1.08
SDC1-205ENST00000447124 SDHBP21912 280 aa21.79■■□□□ 1.08
SDC1-205ENST00000447124 PPP1R2P41236 205 aa21.79■■□□□ 1.08
SDC1-205ENST00000447124 EFEMP1Q12805 493 aa21.79■■□□□ 1.08
SDC1-205ENST00000447124 HSF5Q4G112 596 aaPredicted RBP21.79■■□□□ 1.08
SDC1-205ENST00000447124 SGO2Q562F6 1265 aa21.79■■□□□ 1.08
SDC1-205ENST00000447124 FOXR2Q6PJQ5 311 aa21.79■■□□□ 1.08
SDC1-205ENST00000447124 TERB1Q8NA31 727 aa21.79■■□□□ 1.08
SDC1-205ENST00000447124 OLIG1Q8TAK6 271 aa21.79■■□□□ 1.08
SDC1-205ENST00000447124 ZSWIM1Q9BR11 485 aa21.79■■□□□ 1.08
SDC1-205ENST00000447124 RTKNQ9BST9 563 aa21.79■■□□□ 1.08
SDC1-205ENST00000447124 BBS2Q9BXC9 721 aa21.79■■□□□ 1.08
SDC1-205ENST00000447124 ULBP1Q9BZM6 244 aa21.79■■□□□ 1.08
SDC1-205ENST00000447124 SMOC1Q9H4F8 434 aa21.79■■□□□ 1.08
SDC1-205ENST00000447124 RXFP3Q9NSD7 469 aa21.79■■□□□ 1.08
SDC1-205ENST00000447124 RASAL2Q9UJF2 1139 aa21.79■■□□□ 1.08
SDC1-205ENST00000447124 CTNND2Q9UQB3 1225 aa21.79■■□□□ 1.08
SDC1-205ENST00000447124 GON4LQ3T8J9 2241 aa21.79■■□□□ 1.08
SDC1-205ENST00000447124 NEDD8-MDP1E9PL57 170 aa21.78■■□□□ 1.08
SDC1-205ENST00000447124 O00370 1275 aa21.78■■□□□ 1.08
SDC1-205ENST00000447124 XPO1O14980 1071 aaKnown RBP21.78■■□□□ 1.08
SDC1-205ENST00000447124 CACNG3O60359 315 aa21.78■■□□□ 1.08
SDC1-205ENST00000447124 GABBR2O75899 941 aa21.78■■□□□ 1.08
SDC1-205ENST00000447124 CALCAP01258 141 aa21.78■■□□□ 1.08
SDC1-205ENST00000447124 HMBSP08397 361 aa21.78■■□□□ 1.08
SDC1-205ENST00000447124 BCKDHBP21953 392 aa21.78■■□□□ 1.08
SDC1-205ENST00000447124 YWHAGP61981 247 aaKnown RBP eCLIP21.78■■□□□ 1.08
SDC1-205ENST00000447124 GOLGA8FQ08AF8 430 aa21.78■■□□□ 1.08
SDC1-205ENST00000447124 GOLGA8DPQ0D2H9 430 aa21.78■■□□□ 1.08
SDC1-205ENST00000447124 PKDCCQ504Y2 493 aa21.78■■□□□ 1.08
SDC1-205ENST00000447124 USP39Q53GS9 565 aaKnown RBP21.78■■□□□ 1.08
SDC1-205ENST00000447124 EOGTQ5NDL2 527 aa21.78■■□□□ 1.08
SDC1-205ENST00000447124 TOGARAM2Q6ZUX3 1019 aa21.78■■□□□ 1.08
SDC1-205ENST00000447124 TADA2BQ86TJ2 420 aa21.78■■□□□ 1.08
SDC1-205ENST00000447124 DNAJC17Q9NVM6 304 aaKnown RBP21.78■■□□□ 1.08
SDC1-205ENST00000447124 WDR35Q9P2L0 1181 aa21.78■■□□□ 1.08
SDC1-205ENST00000447124 FBXO10Q9UK96 956 aa21.78■■□□□ 1.08
SDC1-205ENST00000447124 CIZ1Q9ULV3 898 aaPredicted RBP21.78■■□□□ 1.08
SDC1-205ENST00000447124 STARD13Q9Y3M8 1113 aa21.78■■□□□ 1.08
SDC1-205ENST00000447124 PRRT4C9JH25 899 aa21.77■■□□□ 1.08
SDC1-205ENST00000447124 SLC30A4O14863 429 aa21.77■■□□□ 1.08
SDC1-205ENST00000447124 ZBED1O96006 694 aa21.77■■□□□ 1.08
SDC1-205ENST00000447124 TBXAS1P24557 533 aaPredicted RBP21.77■■□□□ 1.08
SDC1-205ENST00000447124 YWHAEP62258 255 aaKnown RBP21.77■■□□□ 1.08
SDC1-205ENST00000447124 COG7P83436 770 aa21.77■■□□□ 1.08
SDC1-205ENST00000447124 C10orf76Q5T2E6 689 aa21.77■■□□□ 1.08
SDC1-205ENST00000447124 GRAMD4Q6IC98 578 aa21.77■■□□□ 1.08
SDC1-205ENST00000447124 TMEM270Q6UE05 265 aa21.77■■□□□ 1.08
SDC1-205ENST00000447124 FRMD1Q8N878 549 aa21.77■■□□□ 1.08
SDC1-205ENST00000447124 EHBP1Q8NDI1 1231 aa21.77■■□□□ 1.08
SDC1-205ENST00000447124 NETO1Q8TDF5 533 aa21.77■■□□□ 1.08
SDC1-205ENST00000447124 KCNV2Q8TDN2 545 aa21.77■■□□□ 1.08
SDC1-205ENST00000447124 RLN3Q8WXF3 142 aa21.77■■□□□ 1.08
SDC1-205ENST00000447124 NT5C1BQ96P26 610 aa21.77■■□□□ 1.08
SDC1-205ENST00000447124 XPO6Q96QU8 1125 aaKnown RBP21.77■■□□□ 1.08
SDC1-205ENST00000447124 ACOX2Q99424 681 aa21.77■■□□□ 1.08
SDC1-205ENST00000447124 PLK2Q9NYY3 685 aa21.77■■□□□ 1.08
SDC1-205ENST00000447124 KIAA1257Q9ULG3 409 aa21.77■■□□□ 1.08
SDC1-205ENST00000447124 PCDHGA5Q9Y5G8 931 aa21.77■■□□□ 1.08
SDC1-205ENST00000447124 RHOBTB1O94844 696 aa21.76■■□□□ 1.07
SDC1-205ENST00000447124 WASP42768 502 aa21.76■■□□□ 1.07
SDC1-205ENST00000447124 BCAT1P54687 386 aa21.76■■□□□ 1.07
SDC1-205ENST00000447124 BST2Q10589 180 aaKnown RBP21.76■■□□□ 1.07
SDC1-205ENST00000447124 EGFLAMQ63HQ2 1017 aa21.76■■□□□ 1.07
SDC1-205ENST00000447124 LCLAT1Q6UWP7 414 aa21.76■■□□□ 1.07
SDC1-205ENST00000447124 RRAGAQ7L523 313 aa21.76■■□□□ 1.07
SDC1-205ENST00000447124 ARHGEF19Q8IW93 802 aa21.76■■□□□ 1.07
SDC1-205ENST00000447124 TRIM59Q8IWR1 403 aa21.76■■□□□ 1.07
SDC1-205ENST00000447124 ARHGAP18Q8N392 663 aa21.76■■□□□ 1.07
SDC1-205ENST00000447124 ZNF513Q8N8E2 541 aaPredicted RBP21.76■■□□□ 1.07
SDC1-205ENST00000447124 BHMTQ93088 406 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms