RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 ABCC13Q9NSE7 274 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 DUS2Q9NX74 493 aaKnown RBP10.74□□□□□ -0.69
LIN54-203ENST00000446851 NR2E1Q9Y466 385 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 CACNA1HO95180 2353 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 GRXCR2A6NFK2 248 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 FSCN2O14926 492 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 RTN2O75298 545 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 PRAMEF12O95522 483 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 PITX1P78337 314 aaPredicted RBP10.73□□□□□ -0.69
LIN54-203ENST00000446851 FAM78AQ5JUQ0 283 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 ADAT2Q7Z6V5 191 aaKnown RBP10.73□□□□□ -0.69
LIN54-203ENST00000446851 CMTM8Q8IZV2 173 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 PGBD3Q8N328 593 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 CARNMT1Q8N4J0 409 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 NETO2Q8NC67 525 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 JOSD2Q8TAC2 188 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 ZNF564Q8TBZ8 553 aaPredicted RBP10.73□□□□□ -0.69
LIN54-203ENST00000446851 FAM172AQ8WUF8 416 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 SLC35F5Q8WV83 523 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 ZNF707Q96C28 371 aaPredicted RBP10.73□□□□□ -0.69
LIN54-203ENST00000446851 BBS2Q9BXC9 721 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 LINC00597Q9H2U6 94 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 PARVAQ9NVD7 372 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 VANGL2Q9ULK5 521 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 TANC1Q9C0D5 1861 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 TBC1D3BA6NDS4 549 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 FBXO21O94952 628 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 CORO1AP31146 461 aaKnown RBP10.73□□□□□ -0.69
LIN54-203ENST00000446851 WASP42768 502 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 MAGEA11P43364 429 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 SOX9P48436 509 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 DAOAP59103 153 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 ZNF677Q86XU0 584 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 SMARCD2Q92925 531 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 UHRF1Q96T88 793 aaPredicted RBP10.73□□□□□ -0.69
LIN54-203ENST00000446851 PHF7Q9BWX1 381 aaPredicted RBP10.73□□□□□ -0.69
LIN54-203ENST00000446851 PMM2O15305 246 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 HSF2BPO75031 334 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 CCDC175P0C221 793 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 MSNP26038 577 aaKnown RBP10.73□□□□□ -0.69
LIN54-203ENST00000446851 ENPEPQ07075 957 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 CCDC173Q0VFZ6 552 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 SMAD4Q13485 552 aaKnown RBP10.73□□□□□ -0.69
LIN54-203ENST00000446851 RAP1GAP2Q684P5 730 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 RYBPQ8N488 228 aaPredicted RBP10.73□□□□□ -0.69
LIN54-203ENST00000446851 SMRP1Q8NCR6 262 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 FGF14Q92915 247 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 EDEM3Q9BZQ6 932 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 GPR88Q9GZN0 384 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 OSGEPQ9NPF4 335 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 PCDHA13Q9Y5I0 950 aa10.73□□□□□ -0.69
LIN54-203ENST00000446851 TCF20Q9UGU0 1960 aaKnown RBP10.72□□□□□ -0.69
LIN54-203ENST00000446851 BDP1A6H8Y1 2624 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 PI4K2BG5E9Z4 385 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 VNN2O95498 520 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 LAMP2P13473 410 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 CHRNB2P17787 502 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 SLC11A2P49281 568 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 SLC18A3Q16572 532 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 ARL13BQ3SXY8 428 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 SH3PXD2AQ5TCZ1 1133 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.72□□□□□ -0.69
LIN54-203ENST00000446851 BPIFB1Q8TDL5 484 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 NAA15Q9BXJ9 866 aaKnown RBP10.72□□□□□ -0.69
LIN54-203ENST00000446851 AIPL1Q9NZN9 384 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 MUTYHQ9UIF7 546 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 SNX10Q9Y5X0 201 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 H0Y626 953 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 KDSRQ06136 332 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 CDH18Q13634 790 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 LRRC31Q6UY01 552 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 MCOLN2Q8IZK6 566 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 DQX1Q8TE96 717 aaKnown RBP10.72□□□□□ -0.69
LIN54-203ENST00000446851 MAK16Q9BXY0 300 aaKnown RBP10.72□□□□□ -0.69
LIN54-203ENST00000446851 TMPRSS4Q9NRS4 437 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 IMPACTQ9P2X3 320 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 TRIM10Q9UDY6 481 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 NOCTQ9UK39 431 aaKnown RBP10.72□□□□□ -0.69
LIN54-203ENST00000446851 DUSP10Q9Y6W6 482 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 SIP14410 1827 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 LRRD1A4D1F6 860 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 GPD1P21695 349 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 JAM2P57087 298 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 LEKR1Q6ZMV7 388 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.72□□□□□ -0.69
LIN54-203ENST00000446851 LRRC8AQ8IWT6 810 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 RNF168Q8IYW5 571 aaPredicted RBP10.72□□□□□ -0.69
LIN54-203ENST00000446851 ADAMTS19Q8TE59 1207 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 TMA16Q96EY4 203 aaKnown RBP10.72□□□□□ -0.69
LIN54-203ENST00000446851 TKTL2Q9H0I9 626 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 KCNK12Q9HB15 430 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 ITIH6Q6UXX5 1313 aa10.72□□□□□ -0.69
LIN54-203ENST00000446851 KRT86O43790 486 aa10.71□□□□□ -0.69
LIN54-203ENST00000446851 HMGA1P17096 107 aaKnown RBP10.71□□□□□ -0.69
LIN54-203ENST00000446851 SEC13P55735 322 aa10.71□□□□□ -0.69
LIN54-203ENST00000446851 NR1H3Q13133 447 aa10.71□□□□□ -0.69
LIN54-203ENST00000446851 CIR1Q86X95 450 aaPredicted RBP10.71□□□□□ -0.69
LIN54-203ENST00000446851 LGI2Q8N0V4 545 aa10.71□□□□□ -0.69
LIN54-203ENST00000446851 WDTC1Q8N5D0 677 aa10.71□□□□□ -0.69
LIN54-203ENST00000446851 TMEM174Q8WUU8 243 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms