RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 GPATCH11Q8N954 259 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 RP9Q8TA86 221 aaKnown RBP5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 CTHRC1Q96CG8 243 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 C18orf8Q96DM3 657 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 CHFRQ96EP1 664 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 WDYHV1Q96HA8 205 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 ZBTB45Q96K62 511 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 SNX27Q96L92 541 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 ZSCAN31Q96LW9 406 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 THAP7Q9BT49 309 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 TMPRSS5Q9H3S3 457 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 UNC45AQ9H3U1 944 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 ZBTB26Q9HCK0 441 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 NECTIN3Q9NQS3 549 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 ARHGEF3Q9NR81 526 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 TM7SF3Q9NS93 570 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 LRFN1Q9P244 771 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 POLG2Q9UHN1 485 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 DRG1Q9Y295 367 aaKnown RBP5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 ENTPD2Q9Y5L3 495 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 GOLGA6L3A6NEY3 463 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 H0YIZ8 118 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 IRAK2O43187 625 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 CBFA2T3O75081 653 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 LMNAP02545 664 aaKnown RBP5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 CTGFP29279 349 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 NTSR1P30989 418 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 CXCR5P32302 372 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 CLK3P49761 638 aaKnown RBP5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 GATMP50440 423 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 CACNA2D1P54289 1103 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 GRM1Q13255 1194 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 PDE1CQ14123 709 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 TOMM20Q15388 145 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 PFKFB4Q16877 469 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 FAAH2Q6GMR7 532 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 ABLIM2Q6H8Q1 611 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 MRNIPQ6NTE8 343 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 ANKRD16Q6P6B7 361 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 Q6ZWC4 215 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 WDR53Q7Z5U6 358 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 METTL25Q8N6Q8 603 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 ATG16L2Q8NAA4 619 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 SIMC1Q8NDZ2 872 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 MBD3L2Q8NHZ7 208 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 SNRNP27Q8WVK2 155 aaKnown RBP5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 ERP27Q96DN0 273 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 BBC3Q96PG8 261 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 SEC62Q99442 399 aaKnown RBP5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 FSD1LQ9BXM9 530 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 PCDHAC1Q9H158 963 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 SLC25A32Q9H2D1 315 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 SMC4Q9NTJ3 1288 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 DACT1Q9NYF0 836 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 CLIC5Q9NZA1 410 aa5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 ZMYND8Q9ULU4 1186 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P48-201ENST00000446155 SETD1BQ9UPS6 1966 aaKnown RBP5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 DHHO43323 396 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 PRKCBP05771 671 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 WT1P19544 449 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 DRD4P21917 467 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 TGFB2P61812 414 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 POU5F1Q01860 360 aaKnown RBP5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 FOXO1Q12778 655 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 CLCA4Q14CN2 919 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 TAF5Q15542 800 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 RAB30Q15771 203 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 MAPKAPK3Q16644 382 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 PLAC9Q5JTB6 97 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 ZNF362Q5T0B9 420 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 FAXCQ5TGI0 409 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 DPY19L3Q6ZPD9 716 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 NGDNQ8NEJ9 315 aaKnown RBP5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 MUL1Q969V5 352 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 HIST1H2AAQ96QV6 131 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 PRR25Q96S07 402 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 WDR24Q96S15 920 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 HAPLN3Q96S86 360 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 TIMP4Q99727 224 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 SORBS1Q9BX66 1292 aaKnown RBP5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 SLC26A6Q9BXS9 759 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 OSBPL5Q9H0X9 879 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 OBP2BQ9NPH6 170 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 DUSP22Q9NRW4 184 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 SLC39A10Q9ULF5 831 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 USP22Q9UPT9 525 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 SLC27A6Q9Y2P4 619 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 ITIH6Q6UXX5 1313 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 NISCHQ9Y2I1 1504 aa5.11□□□□□ -1.59
HMGB1P48-201ENST00000446155 LGALS16A8MUM7 142 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 GCOM1H8Y6P7 765 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 SYT5O00445 386 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 ACKR2O00590 384 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 PODXLO00592 558 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 ZNF213O14771 459 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 NPC1O15118 1278 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 FIBPO43427 364 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 TTLL1O95922 423 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 CD4P01730 458 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms