RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 FAM83EQ2M2I3 478 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 SEL1L3Q68CR1 1132 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 ARHGAP28Q9P2N2 729 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 UBA6A0AVT1 1052 aaPredicted RBP17.16■□□□□ 0.34
TCOF1-206ENST00000445265 SLC1A6P48664 564 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 BNIP1Q12981 228 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 NAB1Q13506 487 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 PDPK2PQ6A1A2 396 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 IRGCQ6NXR0 463 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 SPATA2LQ8IUW3 424 aaPredicted RBP17.16■□□□□ 0.34
TCOF1-206ENST00000445265 WDCPQ9H6R7 721 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 ZNF212Q9UDV6 495 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 HACD1B0YJ81 288 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 NKRFO15226 690 aaKnown RBP eCLIP17.16■□□□□ 0.34
TCOF1-206ENST00000445265 CSDE1O75534 798 aaKnown RBP17.16■□□□□ 0.34
TCOF1-206ENST00000445265 FBXO47Q5MNV8 452 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 LLGL2Q6P1M3 1020 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 KCNT2Q6UVM3 1135 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 PIGWQ7Z7B1 504 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 C2orf69Q8N8R5 385 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 PIK3R5Q8WYR1 880 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 NKD2Q969F2 451 aaPredicted RBP17.16■□□□□ 0.34
TCOF1-206ENST00000445265 ETNK2Q9NVF9 386 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 SORCS3Q9UPU3 1222 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 AAR2Q9Y312 384 aaKnown RBP17.16■□□□□ 0.34
TCOF1-206ENST00000445265 FBXO21O94952 628 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 CCDC153Q494R4 210 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 ACO2Q99798 780 aaKnown RBP17.16■□□□□ 0.34
TCOF1-206ENST00000445265 TSPYL2Q9H2G4 693 aaPredicted RBP17.16■□□□□ 0.34
TCOF1-206ENST00000445265 TNFSF13BQ9Y275 285 aa17.16■□□□□ 0.34
TCOF1-206ENST00000445265 CRYBG1Q9Y4K1 1723 aa17.15■□□□□ 0.34
TCOF1-206ENST00000445265 DGKIO75912 1065 aa17.15■□□□□ 0.34
TCOF1-206ENST00000445265 SRP72O76094 671 aaKnown RBP17.15■□□□□ 0.34
TCOF1-206ENST00000445265 TRUB2O95900 331 aaKnown RBP17.15■□□□□ 0.34
TCOF1-206ENST00000445265 PGAM1P18669 254 aa17.15■□□□□ 0.34
TCOF1-206ENST00000445265 HADHAP40939 763 aa17.15■□□□□ 0.34
TCOF1-206ENST00000445265 ABCE1P61221 599 aaKnown RBP17.15■□□□□ 0.34
TCOF1-206ENST00000445265 KIZQ2M2Z5 673 aa17.15■□□□□ 0.34
TCOF1-206ENST00000445265 HABP4Q5JVS0 413 aaKnown RBP17.15■□□□□ 0.34
TCOF1-206ENST00000445265 CATSPERGQ6ZRH7 1159 aa17.15■□□□□ 0.34
TCOF1-206ENST00000445265 DAW1Q8N136 415 aa17.15■□□□□ 0.34
TCOF1-206ENST00000445265 FAR2Q96K12 515 aa17.15■□□□□ 0.34
TCOF1-206ENST00000445265 C4BPAP04003 597 aaKnown RBP17.15■□□□□ 0.34
TCOF1-206ENST00000445265 BSNDQ8WZ55 320 aa17.15■□□□□ 0.34
TCOF1-206ENST00000445265 RNF157Q96PX1 679 aa17.15■□□□□ 0.34
TCOF1-206ENST00000445265 AURKCQ9UQB9 309 aa17.15■□□□□ 0.34
TCOF1-206ENST00000445265 MROH7Q68CQ1 1323 aa17.15■□□□□ 0.34
TCOF1-206ENST00000445265 MAGEB16A2A368 324 aa17.15■□□□□ 0.34
TCOF1-206ENST00000445265 WFS1O76024 890 aa17.15■□□□□ 0.34
TCOF1-206ENST00000445265 KIAA1841Q6NSI8 718 aa17.15■□□□□ 0.34
TCOF1-206ENST00000445265 BNC2Q6ZN30 1099 aaPredicted RBP17.15■□□□□ 0.34
TCOF1-206ENST00000445265 OTOAQ7RTW8 1153 aa17.15■□□□□ 0.34
TCOF1-206ENST00000445265 LCA5Q86VQ0 697 aa17.15■□□□□ 0.34
TCOF1-206ENST00000445265 ADGRF2Q8IZF7 708 aa17.15■□□□□ 0.34
TCOF1-206ENST00000445265 TRAPPC12Q8WVT3 735 aa17.15■□□□□ 0.34
TCOF1-206ENST00000445265 FAM84AQ96KN4 292 aa17.15■□□□□ 0.34
TCOF1-206ENST00000445265 KLK14Q9P0G3 267 aa17.15■□□□□ 0.34
TCOF1-206ENST00000445265 GRIK1P39086 918 aa17.14■□□□□ 0.34
TCOF1-206ENST00000445265 GEMP55040 296 aa17.14■□□□□ 0.34
TCOF1-206ENST00000445265 DCAF12L1Q5VU92 463 aa17.14■□□□□ 0.34
TCOF1-206ENST00000445265 SCUBE3Q8IX30 993 aa17.14■□□□□ 0.34
TCOF1-206ENST00000445265 AFG1LQ8WV93 481 aa17.14■□□□□ 0.34
TCOF1-206ENST00000445265 PRDM16Q9HAZ2 1276 aa17.14■□□□□ 0.34
TCOF1-206ENST00000445265 AP1G2O75843 785 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 ZCCHC18P0CG32 403 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 TNFSF9P41273 254 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 GRTP1Q5TC63 336 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 ABHD15Q6UXT9 468 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 GFM2Q969S9 779 aaKnown RBP17.14■□□□□ 0.33
TCOF1-206ENST00000445265 CCDC126Q96EE4 140 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 KLHL4Q9C0H6 718 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 BCAS3Q9H6U6 928 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 KDM4FA0A1W2PPD8 638 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 E5RI56 91 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 PSMG1O95456 288 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 CDK7P50613 346 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 ITGA9Q13797 1035 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 GALNT4Q8N4A0 578 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 VANGL2Q9ULK5 521 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 WDR27A2RRH5 827 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 H3BRB1 525 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 TCN1P20061 433 aaPredicted RBP17.14■□□□□ 0.33
TCOF1-206ENST00000445265 HOXD13P35453 343 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 SERPINB5P36952 375 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 ACVR2BQ13705 512 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 SLCO2A1Q92959 643 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 LRMDAQ9H2I8 198 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 TUT1Q9H6E5 874 aaKnown RBP17.14■□□□□ 0.33
TCOF1-206ENST00000445265 KIF9Q9HAQ2 790 aa17.14■□□□□ 0.33
TCOF1-206ENST00000445265 CYP1A1P04798 512 aaPredicted RBP17.13■□□□□ 0.33
TCOF1-206ENST00000445265 MPOP05164 745 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 ACO1P21399 889 aaKnown RBP17.13■□□□□ 0.33
TCOF1-206ENST00000445265 CACNA2D1P54289 1103 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 CYLC2Q14093 348 aaPredicted RBP17.13■□□□□ 0.33
TCOF1-206ENST00000445265 PPP2R3CQ969Q6 453 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 PABPC5Q96DU9 382 aaKnown RBP17.13■□□□□ 0.33
TCOF1-206ENST00000445265 NTPCRQ9BSD7 190 aaKnown RBP17.13■□□□□ 0.33
TCOF1-206ENST00000445265 UBE2OQ9C0C9 1292 aaKnown RBP17.13■□□□□ 0.33
TCOF1-206ENST00000445265 NRDE2Q9H7Z3 1164 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 COL20A1Q9P218 1284 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms