RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 FAM149B1Q96BN6 582 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 PLD4Q96BZ4 506 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 ZFYVE19Q96K21 471 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 CPXM1Q96SM3 734 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 LRFN3Q9BTN0 628 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 OSBPL6Q9BZF3 934 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 POPDC2Q9HBU9 364 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 C11orf16Q9NQ32 467 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 ASNSD1Q9NWL6 643 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 MARCH2Q9P0N8 246 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 CYTH4Q9UIA0 394 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 NOCTQ9UK39 431 aaKnown RBP11.34□□□□□ -0.59
HDAC6-211ENST00000443563 HBS1LQ9Y450 684 aaKnown RBP11.34□□□□□ -0.59
HDAC6-211ENST00000443563 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.34□□□□□ -0.598e-7■■■□□ 18.4
HDAC6-211ENST00000443563 MIA3Q5JRA6 1907 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 TECTAO75443 2155 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 PAPSS1O43252 624 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-211ENST00000443563 GABBR2O75899 941 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 IRF1P10914 325 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 NCAM1P13591 858 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 PBX1P40424 430 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 YWHAZP63104 245 aaKnown RBP11.33□□□□□ -0.6
HDAC6-211ENST00000443563 ASIC2Q16515 512 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 SFMBT2Q5VUG0 894 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 OR6B2Q6IFH4 312 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 MSANTD2Q6P1R3 559 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 RIN3Q8TB24 985 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 CLEC4CQ8WTT0 213 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 BAP1Q92560 729 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 NDRG1Q92597 394 aaKnown RBP11.33□□□□□ -0.6
HDAC6-211ENST00000443563 EDEM1Q92611 657 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 C18orf8Q96DM3 657 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 DDX23Q9BUQ8 820 aaKnown RBP11.33□□□□□ -0.6
HDAC6-211ENST00000443563 XPO4Q9C0E2 1151 aaKnown RBP11.33□□□□□ -0.6
HDAC6-211ENST00000443563 EBF3Q9H4W6 596 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 ECT2Q9H8V3 914 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 TBC1D17Q9HA65 648 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 TMEM51Q9NW97 253 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 GTSE1Q9NYZ3 720 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 AIPL1Q9NZN9 384 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 NUDT5Q9UKK9 219 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 WNT6Q9Y6F9 365 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 ITIH6Q6UXX5 1313 aa11.33□□□□□ -0.6
HDAC6-211ENST00000443563 SLC12A8A0AV02 714 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 LRRC53A6NM62 1247 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 SPECC1L-ADORA2AF8WAN1 911 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 MDM4O15151 490 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 HSF2BPO75031 334 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 ADH1CP00326 375 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 CYP1A1P04798 512 aaPredicted RBP11.32□□□□□ -0.6
HDAC6-211ENST00000443563 TPM1P09493 284 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 ARSAP15289 507 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 AOC1P19801 751 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 SCNN1AP37088 669 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 MAGEA9P43362 315 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 GABRB2P47870 512 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 HARS2P49590 506 aaKnown RBP11.32□□□□□ -0.6
HDAC6-211ENST00000443563 NUBP1P53384 320 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 NOMO3P69849 1222 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 FMO1Q01740 532 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 SLC6A3Q01959 620 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 TNK2Q07912 1038 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 NNTQ13423 1086 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 TRIM14Q14142 442 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 PREPLQ4J6C6 727 aaPredicted RBP11.32□□□□□ -0.6
HDAC6-211ENST00000443563 PTPN20Q4JDL3 420 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 TRIM68Q6AZZ1 485 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 IRF2BP2Q7Z5L9 587 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 UNC45BQ8IWX7 931 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 ADGRG2Q8IZP9 1017 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 PJA1Q8NG27 643 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 SLC20A1Q8WUM9 679 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 FAM3CQ92520 227 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 SERPINB11Q96P15 392 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 AGPAT1Q99943 283 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 TTYH3Q9C0H2 523 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 LTB4R2Q9NPC1 389 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 HPS4Q9NQG7 708 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 RRN3Q9NYV6 651 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 CAPN11Q9UMQ6 739 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 LUC7L2Q9Y383 392 aaKnown RBP11.32□□□□□ -0.6
HDAC6-211ENST00000443563 SIT1Q9Y3P8 196 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 BZW2Q9Y6E2 419 aaKnown RBP11.32□□□□□ -0.6
HDAC6-211ENST00000443563 WDFY4Q6ZS81 3184 aa11.32□□□□□ -0.6
HDAC6-211ENST00000443563 STC2O76061 302 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 LATS1O95835 1130 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 PDGFBP01127 241 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-211ENST00000443563 ERBB2P04626 1255 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 CHRNB2P17787 502 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 TNFAIP3P21580 790 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 GBP1P32455 592 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 CTHP32929 405 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 CHKAP35790 457 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 NSFP46459 744 aaKnown RBP11.31□□□□□ -0.6
HDAC6-211ENST00000443563 ZBED6P86452 979 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 RING1Q06587 406 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 LRRC32Q14392 662 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 UBXN2BQ14CS0 331 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 TRIP4Q15650 581 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-211ENST00000443563 CLEC16AQ2KHT3 1053 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms