RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 KIAA1324Q6UXG2 1013 aaKnown RBP21.58■■□□□ 1.05
TMEM50B-204ENST00000442441 SCARA5Q6ZMJ2 495 aa21.58■■□□□ 1.05
TMEM50B-204ENST00000442441 ZDHHC5Q9C0B5 715 aa21.58■■□□□ 1.05
TMEM50B-204ENST00000442441 CSNK1G1Q9HCP0 422 aa21.58■■□□□ 1.05
TMEM50B-204ENST00000442441 CYLDQ9NQC7 956 aa21.58■■□□□ 1.05
TMEM50B-204ENST00000442441 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.58■■□□□ 1.05
TMEM50B-204ENST00000442441 LSM7Q9UK45 103 aaKnown RBP21.58■■□□□ 1.05
TMEM50B-204ENST00000442441 ADAMTS20P59510 1910 aa21.58■■□□□ 1.04
TMEM50B-204ENST00000442441 IGSF10Q6WRI0 2623 aa21.58■■□□□ 1.04
TMEM50B-204ENST00000442441 WASH3PC4AMC7 463 aa21.57■■□□□ 1.04
TMEM50B-204ENST00000442441 CISD3P0C7P0 127 aa21.57■■□□□ 1.04
TMEM50B-204ENST00000442441 CCDC130P13994 396 aa21.57■■□□□ 1.04
TMEM50B-204ENST00000442441 CD6P30203 668 aa21.57■■□□□ 1.04
TMEM50B-204ENST00000442441 CASP4P49662 377 aa21.57■■□□□ 1.04
TMEM50B-204ENST00000442441 GRIK2Q13002 908 aa21.57■■□□□ 1.04
TMEM50B-204ENST00000442441 C12orf56Q8IXR9 622 aa21.57■■□□□ 1.04
TMEM50B-204ENST00000442441 PNPLA1Q8N8W4 532 aa21.57■■□□□ 1.04
TMEM50B-204ENST00000442441 SLC2A14Q8TDB8 520 aa21.57■■□□□ 1.04
TMEM50B-204ENST00000442441 SDCBP2Q9H190 292 aa21.57■■□□□ 1.04
TMEM50B-204ENST00000442441 CGNQ9P2M7 1197 aaKnown RBP21.57■■□□□ 1.04
TMEM50B-204ENST00000442441 ACACAQ13085 2346 aa21.56■■□□□ 1.04
TMEM50B-204ENST00000442441 EXOC3O60645 756 aa21.56■■□□□ 1.04
TMEM50B-204ENST00000442441 NASPP49321 788 aaPredicted RBP21.56■■□□□ 1.04
TMEM50B-204ENST00000442441 AP3M2P53677 418 aa21.56■■□□□ 1.04
TMEM50B-204ENST00000442441 MAP3K7CLP57077 242 aa21.56■■□□□ 1.04
TMEM50B-204ENST00000442441 EHHADHQ08426 723 aa21.56■■□□□ 1.04
TMEM50B-204ENST00000442441 NCOA4Q13772 614 aa21.56■■□□□ 1.04
TMEM50B-204ENST00000442441 C19orf48Q6RUI8 117 aa21.56■■□□□ 1.04
TMEM50B-204ENST00000442441 CCNI2Q6ZMN8 369 aaPredicted RBP21.56■■□□□ 1.04
TMEM50B-204ENST00000442441 METTL3Q86U44 580 aaKnown RBP21.56■■□□□ 1.04
TMEM50B-204ENST00000442441 PLEKHO2Q8TD55 490 aa21.56■■□□□ 1.04
TMEM50B-204ENST00000442441 DNASE2BQ8WZ79 361 aa21.56■■□□□ 1.04
TMEM50B-204ENST00000442441 ELMO3Q96BJ8 720 aa21.56■■□□□ 1.04
TMEM50B-204ENST00000442441 DHX58Q96C10 678 aa21.56■■□□□ 1.04
TMEM50B-204ENST00000442441 C7orf25Q9BPX7 421 aa21.56■■□□□ 1.04
TMEM50B-204ENST00000442441 CCDC86Q9H6F5 360 aaKnown RBP21.56■■□□□ 1.04
TMEM50B-204ENST00000442441 OSER1Q9NX31 292 aa21.56■■□□□ 1.04
TMEM50B-204ENST00000442441 APOBEC2Q9Y235 224 aaKnown RBP21.56■■□□□ 1.04
TMEM50B-204ENST00000442441 NFE2L3Q9Y4A8 694 aa21.56■■□□□ 1.04
TMEM50B-204ENST00000442441 A0A1B0GTW7 788 aa21.55■■□□□ 1.04
TMEM50B-204ENST00000442441 STK38Q15208 465 aa21.55■■□□□ 1.04
TMEM50B-204ENST00000442441 BMT2Q1RMZ1 405 aa21.55■■□□□ 1.04
TMEM50B-204ENST00000442441 CRYBG2Q8N1P7 616 aa21.55■■□□□ 1.04
TMEM50B-204ENST00000442441 IQUBQ8NA54 791 aa21.55■■□□□ 1.04
TMEM50B-204ENST00000442441 SPRYD3Q8NCJ5 442 aa21.55■■□□□ 1.04
TMEM50B-204ENST00000442441 TOE1Q96GM8 510 aaKnown RBP21.55■■□□□ 1.04
TMEM50B-204ENST00000442441 PRDM16Q9HAZ2 1276 aa21.55■■□□□ 1.04
TMEM50B-204ENST00000442441 WSB2Q9NYS7 404 aaPredicted RBP21.55■■□□□ 1.04
TMEM50B-204ENST00000442441 SCML2Q9UQR0 700 aa21.55■■□□□ 1.04
TMEM50B-204ENST00000442441 STON1Q9Y6Q2 735 aa21.55■■□□□ 1.04
TMEM50B-204ENST00000442441 MYH10P35580 1976 aa21.55■■□□□ 1.04
TMEM50B-204ENST00000442441 APC2O95996 2303 aa21.55■■□□□ 1.04
TMEM50B-204ENST00000442441 LOC400499M0QZD8 3231 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 MEI4A8MW99 385 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 CBFA2T3O75081 653 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 VNN1O95497 513 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 C4BPAP04003 597 aaKnown RBP21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 P4HA1P13674 534 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 NDST1P52848 882 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 CLDN10P78369 228 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 ORC1Q13415 861 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 STARD3Q14849 445 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 FUT11Q495W5 492 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 KLHDC10Q6PID8 442 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 UNC13DQ70J99 1090 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 GLRX5Q86SX6 157 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 LINC00301Q8NCQ3 95 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 PARD3BQ8TEW8 1205 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 BHMTQ93088 406 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 ITM2CQ9NQX7 267 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 FAM49BQ9NUQ9 324 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 PLK2Q9NYY3 685 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 USP36Q9P275 1121 aaKnown RBP21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 TFIP11Q9UBB9 837 aaKnown RBP21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 FBXO10Q9UK96 956 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 PCOLCE2Q9UKZ9 415 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 MTMR6Q9Y217 621 aa21.54■■□□□ 1.04
TMEM50B-204ENST00000442441 PLXNB3Q9ULL4 1909 aa21.53■■□□□ 1.04
TMEM50B-204ENST00000442441 LRRIQ3A6PVS8 624 aaPredicted RBP21.53■■□□□ 1.04
TMEM50B-204ENST00000442441 CYP26A1O43174 497 aa21.53■■□□□ 1.04
TMEM50B-204ENST00000442441 FAM200BP0CF97 657 aa21.53■■□□□ 1.04
TMEM50B-204ENST00000442441 NCAM1P13591 858 aa21.53■■□□□ 1.04
TMEM50B-204ENST00000442441 PLA2G4AP47712 749 aa21.53■■□□□ 1.04
TMEM50B-204ENST00000442441 KNOP1Q1ED39 458 aaKnown RBP21.53■■□□□ 1.04
TMEM50B-204ENST00000442441 Q6ZNB5 142 aa21.53■■□□□ 1.04
TMEM50B-204ENST00000442441 GPRIN1Q7Z2K8 1008 aa21.53■■□□□ 1.04
TMEM50B-204ENST00000442441 SLCO6A1Q86UG4 719 aa21.53■■□□□ 1.04
TMEM50B-204ENST00000442441 PDZD3Q86UT5 571 aa21.53■■□□□ 1.04
TMEM50B-204ENST00000442441 UNC93AQ86WB7 457 aa21.53■■□□□ 1.04
TMEM50B-204ENST00000442441 ZCCHC9Q8N567 271 aaKnown RBP21.53■■□□□ 1.04
TMEM50B-204ENST00000442441 C12orf29Q8N999 325 aa21.53■■□□□ 1.04
TMEM50B-204ENST00000442441 CADM4Q8NFZ8 388 aa21.53■■□□□ 1.04
TMEM50B-204ENST00000442441 GPR174Q9BXC1 333 aa21.53■■□□□ 1.04
TMEM50B-204ENST00000442441 ZSCAN16Q9H4T2 348 aaPredicted RBP21.53■■□□□ 1.04
TMEM50B-204ENST00000442441 NMUR1Q9HB89 426 aa21.53■■□□□ 1.04
TMEM50B-204ENST00000442441 HMGXB4Q9UGU5 601 aa21.53■■□□□ 1.04
TMEM50B-204ENST00000442441 SLC27A6Q9Y2P4 619 aa21.53■■□□□ 1.04
TMEM50B-204ENST00000442441 MDM4O15151 490 aa21.52■■□□□ 1.04
TMEM50B-204ENST00000442441 SPTLC2O15270 562 aa21.52■■□□□ 1.04
TMEM50B-204ENST00000442441 ZNF132P52740 706 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms