RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 FRMD8Q9BZ67 464 aaPredicted RBP13.7□□□□□ -0.22
CPSF4-206ENST00000441580 OSBPL7Q9BZF2 842 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 ULBP1Q9BZM6 244 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 NRDE2Q9H7Z3 1164 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 TMEM51Q9NW97 253 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 A0A087WUV0 522 aaPredicted RBP13.69□□□□□ -0.22
CPSF4-206ENST00000441580 HACD1B0YJ81 288 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 PITPNM1O00562 1244 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 CAPN9O14815 690 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 HOXA2O43364 376 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 TRAPPC3O43617 180 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 BEST1O76090 585 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 ACSL3O95573 720 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 LTFP02788 710 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 SHBGP04278 402 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 TSHRP16473 764 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 IBSPP21815 317 aaPredicted RBP13.69□□□□□ -0.22
CPSF4-206ENST00000441580 L1CAMP32004 1257 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 BRCC3P46736 316 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 PPP2R2AP63151 447 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 GNGT1P63211 74 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 DEUP1Q05D60 604 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 SCAPQ12770 1279 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 MBTPS1Q14703 1052 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 STAT4Q14765 748 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 HIF1AQ16665 826 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 CA9Q16790 459 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 RAB6CQ53S08 254 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 DCAF6Q58WW2 860 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 PPP6R3Q5H9R7 873 aaPredicted RBP13.69□□□□□ -0.22
CPSF4-206ENST00000441580 OTUD1Q5VV17 481 aaPredicted RBP13.69□□□□□ -0.22
CPSF4-206ENST00000441580 BEND5Q7L4P6 421 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 TAOK1Q7L7X3 1001 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 FAM126BQ8IXS8 530 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 GLIS1Q8NBF1 620 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 PCDH19Q8TAB3 1148 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 PGAP3Q96FM1 320 aaPredicted RBP13.69□□□□□ -0.22
CPSF4-206ENST00000441580 QKIQ96PU8 341 aaKnown RBP eCLIP13.69□□□□□ -0.22
CPSF4-206ENST00000441580 CSPG4P5Q96PW8 444 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 KCTD15Q96SI1 283 aaPredicted RBP13.69□□□□□ -0.22
CPSF4-206ENST00000441580 FERMT1Q9BQL6 677 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 RTP3Q9BQQ7 232 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 PAAF1Q9BRP4 392 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 RAB6CQ9H0N0 254 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 ADAM7Q9H2U9 754 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 FZD10Q9ULW2 581 aa13.69□□□□□ -0.22
CPSF4-206ENST00000441580 TIMM13Q9Y5L4 95 aaPredicted RBP13.69□□□□□ -0.22
CPSF4-206ENST00000441580 MYO16Q9Y6X6 1858 aa13.68□□□□□ -0.22
CPSF4-206ENST00000441580 HHLA1C9JL84 531 aa13.68□□□□□ -0.22
CPSF4-206ENST00000441580 SYN3O14994 580 aa13.68□□□□□ -0.22
CPSF4-206ENST00000441580 CHADO15335 359 aa13.68□□□□□ -0.22
CPSF4-206ENST00000441580 PARNO95453 639 aaKnown RBP13.68□□□□□ -0.22
CPSF4-206ENST00000441580 F9P00740 461 aa13.68□□□□□ -0.22
CPSF4-206ENST00000441580 ZSCAN5DPP0CG00 497 aa13.68□□□□□ -0.22
CPSF4-206ENST00000441580 TFE3P19532 575 aaPredicted RBP13.68□□□□□ -0.22
CPSF4-206ENST00000441580 HPDP32754 393 aaPredicted RBP13.68□□□□□ -0.22
CPSF4-206ENST00000441580 RPL22P35268 128 aaKnown RBP13.68□□□□□ -0.22
CPSF4-206ENST00000441580 MAGEA4P43358 317 aa13.68□□□□□ -0.22
CPSF4-206ENST00000441580 GDF10P55107 478 aa13.68□□□□□ -0.22
CPSF4-206ENST00000441580 YWHAHQ04917 246 aaPredicted RBP13.68□□□□□ -0.22
CPSF4-206ENST00000441580 RNASELQ05823 741 aaKnown RBP13.68□□□□□ -0.22
CPSF4-206ENST00000441580 ARL13BQ3SXY8 428 aa13.68□□□□□ -0.22
CPSF4-206ENST00000441580 SLC45A4Q5BKX6 768 aa13.68□□□□□ -0.22
CPSF4-206ENST00000441580 CLLU1OSQ5K130 101 aa13.68□□□□□ -0.22
CPSF4-206ENST00000441580 C1orf228Q6PIY5 440 aa13.68□□□□□ -0.22
CPSF4-206ENST00000441580 CD300LGQ6UXG3 332 aa13.68□□□□□ -0.22
CPSF4-206ENST00000441580 SPATA2LQ8IUW3 424 aaPredicted RBP13.68□□□□□ -0.22
CPSF4-206ENST00000441580 DCP1BQ8IZD4 617 aaKnown RBP13.68□□□□□ -0.22
CPSF4-206ENST00000441580 ABI1Q8IZP0 508 aa13.68□□□□□ -0.22
CPSF4-206ENST00000441580 CCDC185Q8N715 623 aa13.68□□□□□ -0.22
CPSF4-206ENST00000441580 FAM71DQ8N9W8 422 aa13.68□□□□□ -0.22
CPSF4-206ENST00000441580 ZMIZ2Q8NF64 920 aa13.68□□□□□ -0.22
CPSF4-206ENST00000441580 SEPT8Q92599 483 aa13.68□□□□□ -0.22
CPSF4-206ENST00000441580 FAM193BQ96PV7 902 aaPredicted RBP13.68□□□□□ -0.22
CPSF4-206ENST00000441580 MRPL9Q9BYD2 267 aaKnown RBP13.68□□□□□ -0.22
CPSF4-206ENST00000441580 SAYSD1Q9NPB0 183 aa13.68□□□□□ -0.22
CPSF4-206ENST00000441580 BCCIPQ9P287 314 aaKnown RBP eCLIP13.68□□□□□ -0.22
CPSF4-206ENST00000441580 NOVA2Q9UNW9 492 aaKnown RBP13.68□□□□□ -0.22
CPSF4-206ENST00000441580 RAD54BQ9Y620 910 aa13.68□□□□□ -0.22
CPSF4-206ENST00000441580 USP3Q9Y6I4 520 aa13.68□□□□□ -0.22
CPSF4-206ENST00000441580 I3L4J1 428 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 M0QYT0 321 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 ETS1P14921 441 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 IL4RP24394 825 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 YY1P25490 414 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 PHBP35232 272 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 CDK7P50613 346 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 MAGOHP61326 146 aaKnown RBP13.67□□□□□ -0.22
CPSF4-206ENST00000441580 BASP1P80723 227 aaKnown RBP13.67□□□□□ -0.22
CPSF4-206ENST00000441580 PAN2Q504Q3 1202 aaKnown RBP13.67□□□□□ -0.22
CPSF4-206ENST00000441580 DNAJC21Q5F1R6 531 aaKnown RBP13.67□□□□□ -0.22
CPSF4-206ENST00000441580 NPNTQ6UXI9 565 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 FAM131BQ86XD5 332 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 UNC45BQ8IWX7 931 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 COLGALT2Q8IYK4 626 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 NAT8LQ8N9F0 302 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 ATP11CQ8NB49 1132 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 OR10T2Q8NGX3 314 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 SLC7A14Q8TBB6 771 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 EPS8L3Q8TE67 593 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms