RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 IYDQ6PHW0 289 aa21.01■□□□□ 0.95
SHOX2-203ENST00000441443 POLNQ7Z5Q5 900 aa21.01■□□□□ 0.95
SHOX2-203ENST00000441443 SPATA18Q8TC71 538 aa21.01■□□□□ 0.95
SHOX2-203ENST00000441443 FAF2Q96CS3 445 aa21.01■□□□□ 0.95
SHOX2-203ENST00000441443 ZNF510Q9Y2H8 683 aa21.01■□□□□ 0.95
SHOX2-203ENST00000441443 RIPK3Q9Y572 518 aa21.01■□□□□ 0.95
SHOX2-203ENST00000441443 H3BNX3 289 aa21■□□□□ 0.95
SHOX2-203ENST00000441443 SIN3BO75182 1162 aa21■□□□□ 0.95
SHOX2-203ENST00000441443 CALB1P05937 261 aa21■□□□□ 0.95
SHOX2-203ENST00000441443 CDK4P11802 303 aa21■□□□□ 0.95
SHOX2-203ENST00000441443 TSHRP16473 764 aa21■□□□□ 0.95
SHOX2-203ENST00000441443 KDELR1P24390 212 aa21■□□□□ 0.95
SHOX2-203ENST00000441443 MYLK3Q32MK0 819 aa21■□□□□ 0.95
SHOX2-203ENST00000441443 C16orf46Q6P387 395 aa21■□□□□ 0.95
SHOX2-203ENST00000441443 PGM2L1Q6PCE3 622 aa21■□□□□ 0.95
SHOX2-203ENST00000441443 WDR75Q8IWA0 830 aaKnown RBP21■□□□□ 0.95
SHOX2-203ENST00000441443 KIAA0319LQ8IZA0 1049 aa21■□□□□ 0.95
SHOX2-203ENST00000441443 CNBD2Q96M20 576 aa21■□□□□ 0.95
SHOX2-203ENST00000441443 TJP2Q9UDY2 1190 aa21■□□□□ 0.95
SHOX2-203ENST00000441443 APOBEC2Q9Y235 224 aaKnown RBP21■□□□□ 0.95
SHOX2-203ENST00000441443 ZNF541Q9H0D2 1346 aa21■□□□□ 0.95
SHOX2-203ENST00000441443 ALDH1A3P47895 512 aa21■□□□□ 0.95
SHOX2-203ENST00000441443 XIAPP98170 497 aa21■□□□□ 0.95
SHOX2-203ENST00000441443 POTEAQ6S8J7 498 aa21■□□□□ 0.95
SHOX2-203ENST00000441443 C4orf19Q8IY42 314 aa21■□□□□ 0.95
SHOX2-203ENST00000441443 TTC13Q8NBP0 860 aa21■□□□□ 0.95
SHOX2-203ENST00000441443 CLMNQ96JQ2 1002 aa21■□□□□ 0.95
SHOX2-203ENST00000441443 ZC3H7BQ9UGR2 993 aaKnown RBP21■□□□□ 0.95
SHOX2-203ENST00000441443 LOXHD1Q8IVV2 1947 aa21■□□□□ 0.95
SHOX2-203ENST00000441443 TBC1D12O60347 775 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 LRCH4O75427 683 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 CSH1P0DML2 217 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 CSH2P0DML3 217 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 SLC25A11Q02978 314 aaKnown RBP20.99■□□□□ 0.95
SHOX2-203ENST00000441443 SNAPC2Q13487 334 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 ZBTB41Q5SVQ8 909 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 VWA5B1Q5TIE3 1220 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 KLC3Q6P597 504 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 DARS2Q6PI48 645 aaKnown RBP20.99■□□□□ 0.95
SHOX2-203ENST00000441443 TAS1R3Q7RTX0 852 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 MCF2L2Q86YR7 1114 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 JOSD2Q8TAC2 188 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 HSPH1Q92598 858 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 DCUN1D1Q96GG9 259 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 CALN1Q9BXU9 219 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 GMEB1Q9Y692 573 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 SF3B1O75533 1304 aaKnown RBP eCLIP20.99■□□□□ 0.95
SHOX2-203ENST00000441443 LYPLA2O95372 231 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 ADARP55265 1226 aaKnown RBP20.99■□□□□ 0.95
SHOX2-203ENST00000441443 BAATQ14032 418 aaPredicted RBP20.99■□□□□ 0.95
SHOX2-203ENST00000441443 SEZ6Q53EL9 994 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 EMC1Q8N766 993 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 PIP4K2CQ8TBX8 421 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 MIPOL1Q8TD10 442 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 RAB6BQ9NRW1 208 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 THAP1Q9NVV9 213 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 TELO2Q9Y4R8 837 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 MCF2LO15068 1137 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 ADCY3O60266 1144 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 NCF2P19878 526 aaPredicted RBP20.99■□□□□ 0.95
SHOX2-203ENST00000441443 LIG4P49917 911 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 RPL10AP62906 217 aaKnown RBP20.99■□□□□ 0.95
SHOX2-203ENST00000441443 YWHAZP63104 245 aaKnown RBP20.99■□□□□ 0.95
SHOX2-203ENST00000441443 GPAT2Q6NUI2 795 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 KCTD6Q8NC69 237 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 OR5B17Q8NGF7 314 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 PIWIL2Q8TC59 973 aaKnown RBP20.99■□□□□ 0.95
SHOX2-203ENST00000441443 ACTRT2Q8TDY3 377 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 LRRN4Q8WUT4 740 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 JADE3Q92613 823 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 ZBTB45Q96K62 511 aaPredicted RBP20.99■□□□□ 0.95
SHOX2-203ENST00000441443 CEP170P1Q96L14 293 aa20.99■□□□□ 0.95
SHOX2-203ENST00000441443 WDR46O15213 610 aaKnown RBP20.98■□□□□ 0.95
SHOX2-203ENST00000441443 AP1G1O43747 822 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 EXTL3O43909 919 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 DNAJA2O60884 412 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 CCNE2O96020 404 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 CCDC166P0CW27 439 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 ITGAXP20702 1163 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 PSMD6Q15008 389 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 DUS1LQ6P1R4 473 aaKnown RBP20.98■□□□□ 0.95
SHOX2-203ENST00000441443 WDTC1Q8N5D0 677 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 BTBD9Q96Q07 612 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 PRPF18Q99633 342 aaKnown RBP20.98■□□□□ 0.95
SHOX2-203ENST00000441443 PIM2Q9P1W9 311 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 TTLL13PA6NNM8 815 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 ITGBL1O95965 494 aaPredicted RBP20.98■□□□□ 0.95
SHOX2-203ENST00000441443 GARTP22102 1010 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 KCNA4P22459 653 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 TMEM62Q0P6H9 643 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 MMRN1Q13201 1228 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 PGM5Q15124 567 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 FASTKD1Q53R41 847 aaKnown RBP20.98■□□□□ 0.95
SHOX2-203ENST00000441443 FRMD7Q6ZUT3 714 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 MICALL2Q8IY33 904 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 CATSPER2Q96P56 530 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 DEFB129Q9H1M3 183 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 IFT122Q9HBG6 1241 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 PLAC1Q9HBJ0 212 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 SLC38A10Q9HBR0 1119 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms