RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 VSNL1P62760 191 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 PLD1Q13393 1074 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 ZNF211Q13398 564 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 MAPRE1Q15691 268 aaKnown RBP15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 CNGA2Q16280 664 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 PPP2R5EQ16537 467 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 POTEHQ6S545 545 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 TMC8Q8IU68 726 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 KLHL7Q8IXQ5 586 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 CRYBG2Q8N1P7 616 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 ELMOD1Q8N336 334 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 KRT35Q92764 455 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 FUBP3Q96I24 572 aaKnown RBP eCLIP15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 TNIP3Q96KP6 325 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 ZNF512Q96ME7 567 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 KRT12Q99456 494 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 LRRC3Q9BY71 257 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 KRT82Q9NSB4 513 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 HSFX1Q9UBD0 423 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 HESX1Q9UBX0 185 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 PCDHA3Q9Y5H8 950 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 VCANP13611 3396 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 F8VP50 259 aa15.23■□□□□ 0.03
TNFRSF1A-204ENST00000440083 PSTPIP1O43586 416 aa15.23■□□□□ 0.03
TNFRSF1A-204ENST00000440083 MOSPD3O75425 235 aa15.23■□□□□ 0.03
TNFRSF1A-204ENST00000440083 PTPN2P17706 415 aa15.23■□□□□ 0.03
TNFRSF1A-204ENST00000440083 MAGEA11P43364 429 aa15.23■□□□□ 0.03
TNFRSF1A-204ENST00000440083 PTPN20Q4JDL3 420 aa15.23■□□□□ 0.03
TNFRSF1A-204ENST00000440083 PRSS36Q5K4E3 855 aa15.23■□□□□ 0.03
TNFRSF1A-204ENST00000440083 CYP4A22Q5TCH4 519 aa15.23■□□□□ 0.03
TNFRSF1A-204ENST00000440083 DCAF12L1Q5VU92 463 aa15.23■□□□□ 0.03
TNFRSF1A-204ENST00000440083 CC2D1AQ6P1N0 951 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF1A-204ENST00000440083 DNAJB7Q7Z6W7 309 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF1A-204ENST00000440083 C3orf20Q8ND61 904 aa15.23■□□□□ 0.03
TNFRSF1A-204ENST00000440083 ALG3Q92685 438 aa15.23■□□□□ 0.03
TNFRSF1A-204ENST00000440083 CD101Q93033 1021 aa15.23■□□□□ 0.03
TNFRSF1A-204ENST00000440083 PSMG2Q969U7 264 aa15.23■□□□□ 0.03
TNFRSF1A-204ENST00000440083 C18orf8Q96DM3 657 aa15.23■□□□□ 0.03
TNFRSF1A-204ENST00000440083 MCEEQ96PE7 176 aa15.23■□□□□ 0.03
TNFRSF1A-204ENST00000440083 LRRC1Q9BTT6 524 aa15.23■□□□□ 0.03
TNFRSF1A-204ENST00000440083 AP1M1Q9BXS5 423 aa15.23■□□□□ 0.03
TNFRSF1A-204ENST00000440083 ASAH2Q9NR71 780 aa15.23■□□□□ 0.03
TNFRSF1A-204ENST00000440083 USTQ9Y2C2 406 aa15.23■□□□□ 0.03
TNFRSF1A-204ENST00000440083 C19orf67A6NJJ6 358 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 SLC38A8A6NNN8 435 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 LOC730098B7Z3J9 87 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 GOLGA8SH3BPF8 625 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 AP1G2O75843 785 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 BEST1O76090 585 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 SETSIPP0DME0 302 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 HMGA1P17096 107 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 GBP2P32456 591 aaPredicted RBP15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 GRIK1P39086 918 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 MARCKSL1P49006 195 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 SNX16P57768 344 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 RPL10AP62906 217 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 PDCLQ13371 301 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 VEPH1Q14D04 833 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 LCLAT1Q6UWP7 414 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 RHOT1Q8IXI2 618 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 WDTC1Q8N5D0 677 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 TDRD5Q8NAT2 981 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 SHKBP1Q8TBC3 707 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 HNRNPLLQ8WVV9 542 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 KCNK16Q96T55 309 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 COL25A1Q9BXS0 654 aaPredicted RBP15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 SLITRK6Q9H5Y7 841 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 STIM2Q9P246 746 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 PRKAG3Q9UGI9 489 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 TMEM59LQ9UK28 342 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 TSPAN16Q9UKR8 245 aa15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 MAGED2Q9UNF1 606 aaPredicted RBP15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 MRPS23Q9Y3D9 190 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1A-204ENST00000440083 HEXIM1O94992 359 aaKnown RBP15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 GJC1P36383 396 aa15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 CETN2P41208 172 aa15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 EPHA5P54756 1037 aa15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 GSCP56915 257 aaPredicted RBP15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 USP46P62068 366 aa15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 PIGHQ14442 188 aaPredicted RBP15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 ZNF268Q14587 947 aaPredicted RBP15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 STXBP5Q5T5C0 1151 aa15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 PPP1R26Q5T8A7 1209 aaPredicted RBP15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 VSTM1Q6UX27 236 aa15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 PDZD4Q76G19 769 aaPredicted RBP15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 ITIH5Q86UX2 942 aa15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 CPNE8Q86YQ8 564 aa15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 NPAS3Q8IXF0 933 aa15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 IFT20Q8IY31 132 aa15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 ZMIZ2Q8NF64 920 aa15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 CCDC26Q8TAB7 109 aa15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 UBA3Q8TBC4 463 aa15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 MAIP1Q8WWC4 291 aa15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 FGF13Q92913 245 aa15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 SMOQ99835 787 aa15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 TRIM7Q9C029 511 aa15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 IL21Q9HBE4 155 aa15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 ASB3Q9Y575 518 aa15.21■□□□□ 0.03
TNFRSF1A-204ENST00000440083 GREB1Q4ZG55 1949 aa15.2■□□□□ 0.02
TNFRSF1A-204ENST00000440083 A0A1W2PRU2 124 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms