RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 UCNP55089 124 aa11.86□□□□□ -0.51
CSTF3-203ENST00000438862 USP46P62068 366 aa11.86□□□□□ -0.51
CSTF3-203ENST00000438862 NOP14P78316 857 aaKnown RBP11.86□□□□□ -0.51
CSTF3-203ENST00000438862 TARDBPQ13148 414 aaKnown RBP eCLIP11.86□□□□□ -0.51
CSTF3-203ENST00000438862 MAPRE1Q15691 268 aaKnown RBP11.86□□□□□ -0.51
CSTF3-203ENST00000438862 KIF19Q2TAC6 998 aa11.86□□□□□ -0.51
CSTF3-203ENST00000438862 FMNL3Q8IVF7 1028 aa11.86□□□□□ -0.51
CSTF3-203ENST00000438862 SPACA3Q8IXA5 215 aa11.86□□□□□ -0.51
CSTF3-203ENST00000438862 KRI1Q8N9T8 703 aaKnown RBP11.86□□□□□ -0.51
CSTF3-203ENST00000438862 SLITRK1Q96PX8 696 aa11.86□□□□□ -0.51
CSTF3-203ENST00000438862 XPO6Q96QU8 1125 aaKnown RBP11.86□□□□□ -0.51
CSTF3-203ENST00000438862 SPSB2Q99619 263 aa11.86□□□□□ -0.51
CSTF3-203ENST00000438862 NUP58Q9BVL2 599 aa11.86□□□□□ -0.51
CSTF3-203ENST00000438862 OSGEPQ9NPF4 335 aa11.86□□□□□ -0.51
CSTF3-203ENST00000438862 L1RE1Q9UN81 338 aa11.86□□□□□ -0.51
CSTF3-203ENST00000438862 SMC3Q9UQE7 1217 aa11.86□□□□□ -0.51
CSTF3-203ENST00000438862 SH3BP1Q9Y3L3 701 aa11.86□□□□□ -0.51
CSTF3-203ENST00000438862 KNL1Q8NG31 2342 aa11.85□□□□□ -0.51
CSTF3-203ENST00000438862 GABRDO14764 452 aa11.85□□□□□ -0.51
CSTF3-203ENST00000438862 TRIM66O15016 1216 aa11.85□□□□□ -0.51
CSTF3-203ENST00000438862 PAPSS1O43252 624 aaPredicted RBP11.85□□□□□ -0.51
CSTF3-203ENST00000438862 SLC28A2O43868 658 aa11.85□□□□□ -0.51
CSTF3-203ENST00000438862 ABCD1P33897 745 aa11.85□□□□□ -0.51
CSTF3-203ENST00000438862 CCDC173Q0VFZ6 552 aa11.85□□□□□ -0.51
CSTF3-203ENST00000438862 KCNH2Q12809 1159 aa11.85□□□□□ -0.51
CSTF3-203ENST00000438862 STARD3Q14849 445 aa11.85□□□□□ -0.51
CSTF3-203ENST00000438862 BROXQ5VW32 411 aa11.85□□□□□ -0.51
CSTF3-203ENST00000438862 TDRD10Q5VZ19 366 aaKnown RBP11.85□□□□□ -0.51
CSTF3-203ENST00000438862 TMEM25Q86YD3 366 aa11.85□□□□□ -0.51
CSTF3-203ENST00000438862 CACTIN-AS1Q8N1I8 211 aa11.85□□□□□ -0.51
CSTF3-203ENST00000438862 C4orf32Q8N8J7 132 aa11.85□□□□□ -0.51
CSTF3-203ENST00000438862 SYT2Q8N9I0 419 aaPredicted RBP11.85□□□□□ -0.51
CSTF3-203ENST00000438862 ERLEC1Q96DZ1 483 aa11.85□□□□□ -0.51
CSTF3-203ENST00000438862 DNAJC17Q9NVM6 304 aaKnown RBP11.85□□□□□ -0.51
CSTF3-203ENST00000438862 GDAP2Q9NXN4 497 aa11.85□□□□□ -0.51
CSTF3-203ENST00000438862 ANKRD6Q9Y2G4 727 aa11.85□□□□□ -0.51
CSTF3-203ENST00000438862 SNX11Q9Y5W9 270 aa11.85□□□□□ -0.51
CSTF3-203ENST00000438862 RAD54BQ9Y620 910 aa11.85□□□□□ -0.51
CSTF3-203ENST00000438862 UNC79Q9P2D8 2635 aa11.85□□□□□ -0.51
CSTF3-203ENST00000438862 TMEM131Q92545 1883 aa11.85□□□□□ -0.51
CSTF3-203ENST00000438862 MYLKQ15746 1914 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 COL5A1P20908 1838 aaPredicted RBP11.84□□□□□ -0.51
CSTF3-203ENST00000438862 KCNJ18B7U540 433 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 PYCARD-AS1I3L0S3 204 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 ENC1O14682 589 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 NPC1O15118 1278 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 TRIM24O15164 1050 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 RFPL3O75679 317 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 IL18RAPO95256 599 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 IGLV3-19P01714 112 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 FECHP22830 423 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 BDNFP23560 247 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 GRIA4P48058 902 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 TPMTP51580 245 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 TMPRSS3P57727 454 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 TAF10Q12962 218 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 ORC1Q13415 861 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 TTC38Q5R3I4 469 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 ADALQ6DHV7 355 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 SLFN12LQ6IEE8 588 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 DPH6Q7L8W6 267 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 KCNK18Q7Z418 384 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 TOP6BLQ8N6T0 577 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 LRRC52Q8N7C0 313 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 FAM184AQ8NB25 1140 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 ZNF248Q8NDW4 579 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 MED8Q96G25 268 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 WDR35Q9P2L0 1181 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 AGAP1Q9UPQ3 857 aa11.84□□□□□ -0.51
CSTF3-203ENST00000438862 WASH3PC4AMC7 463 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 PRRT4C9JH25 899 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 CACNG3O60359 315 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 BRINP1O60477 761 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 ACADMP11310 421 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 POLR2BP30876 1174 aaKnown RBP11.83□□□□□ -0.52
CSTF3-203ENST00000438862 TRAPPC10P48553 1259 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 LY6DQ14210 128 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 E2F5Q15329 346 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 TBC1D25Q3MII6 688 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 FUT11Q495W5 492 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 LCE2AQ5TA79 106 aaPredicted RBP11.83□□□□□ -0.52
CSTF3-203ENST00000438862 SLC39A4Q6P5W5 647 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 OSTM1Q86WC4 334 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 TMPRSS6Q8IU80 811 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 BBS7Q8IWZ6 715 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 ADGRF2Q8IZF7 708 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 PDZD8Q8NEN9 1154 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 CACTINQ8WUQ7 758 aaKnown RBP11.83□□□□□ -0.52
CSTF3-203ENST00000438862 PRCCQ92733 491 aaPredicted RBP11.83□□□□□ -0.52
CSTF3-203ENST00000438862 THAP11Q96EK4 314 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 SIPA1Q96FS4 1042 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 C8orf48Q96LL4 319 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 LGMNQ99538 433 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 SEMA4CQ9C0C4 833 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 MKRN2Q9H000 416 aaKnown RBP11.83□□□□□ -0.52
CSTF3-203ENST00000438862 IL17BQ9UHF5 180 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 DACH1Q9UI36 760 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 AGO2Q9UKV8 859 aaKnown RBP11.83□□□□□ -0.52
CSTF3-203ENST00000438862 CDH9Q9ULB4 789 aa11.83□□□□□ -0.52
CSTF3-203ENST00000438862 ODF2LQ9ULJ1 636 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms