RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 PNPLA8Q9NP80 782 aa8.02□□□□□ -1.13
HMGB2-202ENST00000438704 DDX56Q9NY93 547 aaKnown RBP8.02□□□□□ -1.13
HMGB2-202ENST00000438704 ZFATQ9P243 1243 aa8.02□□□□□ -1.13
HMGB2-202ENST00000438704 STIM2Q9P246 746 aa8.02□□□□□ -1.13
HMGB2-202ENST00000438704 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.02□□□□□ -1.13
HMGB2-202ENST00000438704 CHORDC1Q9UHD1 332 aaPredicted RBP8.02□□□□□ -1.13
HMGB2-202ENST00000438704 V9GYY5 206 aaPredicted RBP8.02□□□□□ -1.13
HMGB2-202ENST00000438704 CARNS1A5YM72 827 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 DCDC2CA8MYV0 355 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 ZNF487B1APH4 448 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 KRIT1O00522 736 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 SYN3O14994 580 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 SART1O43290 800 aaKnown RBP8.01□□□□□ -1.13
HMGB2-202ENST00000438704 ERLIN1O75477 346 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 OAZ2O95190 189 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 ZRANB2O95218 330 aaKnown RBP eCLIP8.01□□□□□ -1.13
HMGB2-202ENST00000438704 GLI1P08151 1106 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 KRT7P08729 469 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 PYGMP11217 842 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 NPR3P17342 541 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 CHRNA3P32297 505 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 RFC1P35251 1148 aaPredicted RBP8.01□□□□□ -1.13
HMGB2-202ENST00000438704 PTPN9P43378 593 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 MARCKSL1P49006 195 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 FNTAP49354 379 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 NRLP54845 237 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 DRG2P55039 364 aaKnown RBP8.01□□□□□ -1.13
HMGB2-202ENST00000438704 SLC6A3Q01959 620 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 PDE4CQ08493 712 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 C2orf54Q08AI8 447 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 FAAP100Q0VG06 881 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 KLF1Q13351 362 aaPredicted RBP8.01□□□□□ -1.13
HMGB2-202ENST00000438704 ORC1Q13415 861 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 DHX34Q14147 1143 aaKnown RBP8.01□□□□□ -1.13
HMGB2-202ENST00000438704 SIX1Q15475 284 aaPredicted RBP8.01□□□□□ -1.13
HMGB2-202ENST00000438704 MAPRE1Q15691 268 aaKnown RBP8.01□□□□□ -1.13
HMGB2-202ENST00000438704 RAB41Q5JT25 222 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 PMF1Q6P1K2 205 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 LLGL2Q6P1M3 1020 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 DRICH1Q6PGQ1 229 aaPredicted RBP8.01□□□□□ -1.13
HMGB2-202ENST00000438704 ELMSAN1Q6PJG2 1045 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 IGF2-ASQ6U949 168 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 PAQR9Q6ZVX9 377 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 MAATS1Q7Z4T9 603 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 NPAS4Q8IUM7 802 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 RCOR2Q8IZ40 523 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 DBF4BQ8NFT6 615 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 MYCBPAPQ8TBZ2 947 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 URGCPQ8TCY9 931 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 CENPIQ92674 756 aaPredicted RBP8.01□□□□□ -1.13
HMGB2-202ENST00000438704 RBM41Q96IZ5 413 aaKnown RBP8.01□□□□□ -1.13
HMGB2-202ENST00000438704 MCEEQ96PE7 176 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 PNKPQ96T60 521 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 TBCBQ99426 244 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 RTP3Q9BQQ7 232 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 SYT15Q9BQS2 421 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 TMEM175Q9BSA9 504 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 CNPY3Q9BT09 278 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 C11orf84Q9BUA3 381 aaPredicted RBP8.01□□□□□ -1.13
HMGB2-202ENST00000438704 MRPL9Q9BYD2 267 aaKnown RBP8.01□□□□□ -1.13
HMGB2-202ENST00000438704 DPEP3Q9H4B8 488 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 LRRC19Q9H756 370 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 CSNK1G1Q9HCP0 422 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 GDF3Q9NR23 364 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 HOMER3Q9NSC5 361 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 TMEM51Q9NW97 253 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 EHD2Q9NZN4 543 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 PCYOX1Q9UHG3 505 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 COL4A4P53420 1690 aaPredicted RBP8.01□□□□□ -1.13
HMGB2-202ENST00000438704 TDRD15B5MCY1 1934 aaKnown RBP8.01□□□□□ -1.13
HMGB2-202ENST00000438704 TSC2P49815 1807 aa8.01□□□□□ -1.13
HMGB2-202ENST00000438704 KIAA0100Q14667 2235 aaKnown RBP8.01□□□□□ -1.13
HMGB2-202ENST00000438704 TET1Q8NFU7 2136 aa8□□□□□ -1.13
HMGB2-202ENST00000438704 KRTAP9-6A0A140TA67 174 aa8□□□□□ -1.13
HMGB2-202ENST00000438704 CASTOR2A6NHX0 329 aa8□□□□□ -1.13
HMGB2-202ENST00000438704 TMEM110-MUSTN1A8MSY1 372 aa8□□□□□ -1.13
HMGB2-202ENST00000438704 E5RJQ4 531 aa8□□□□□ -1.13
HMGB2-202ENST00000438704 F8VP50 259 aa8□□□□□ -1.13
HMGB2-202ENST00000438704 PAPSS1O43252 624 aaPredicted RBP8□□□□□ -1.13
HMGB2-202ENST00000438704 LRCH4O75427 683 aa8□□□□□ -1.13
HMGB2-202ENST00000438704 B3GAT3O94766 335 aa8□□□□□ -1.13
HMGB2-202ENST00000438704 ENDOD1O94919 500 aa8□□□□□ -1.13
HMGB2-202ENST00000438704 FBXO21O94952 628 aa8□□□□□ -1.13
HMGB2-202ENST00000438704 EFEMP2O95967 443 aa8□□□□□ -1.13
HMGB2-202ENST00000438704 PDGFRBP09619 1106 aa8□□□□□ -1.13
HMGB2-202ENST00000438704 RARAP10276 462 aa8□□□□□ -1.13
HMGB2-202ENST00000438704 HSPA8P11142 646 aaKnown RBP8□□□□□ -1.13
HMGB2-202ENST00000438704 TKTP29401 623 aaKnown RBP8□□□□□ -1.13
HMGB2-202ENST00000438704 WEE1P30291 646 aa8□□□□□ -1.13
HMGB2-202ENST00000438704 SLC8A3P57103 927 aa8□□□□□ -1.13
HMGB2-202ENST00000438704 TAS2R40P59535 323 aa8□□□□□ -1.13
HMGB2-202ENST00000438704 C1QTNF8P60827 252 aa8□□□□□ -1.13
HMGB2-202ENST00000438704 VSNL1P62760 191 aa8□□□□□ -1.13
HMGB2-202ENST00000438704 SLC25A11Q02978 314 aaKnown RBP8□□□□□ -1.13
HMGB2-202ENST00000438704 HADHQ16836 314 aaKnown RBP8□□□□□ -1.13
HMGB2-202ENST00000438704 LONRF2Q1L5Z9 754 aa8□□□□□ -1.13
HMGB2-202ENST00000438704 MAP9Q49MG5 647 aa8□□□□□ -1.13
HMGB2-202ENST00000438704 C2CD6Q53TS8 623 aa8□□□□□ -1.13
HMGB2-202ENST00000438704 BEND6Q5SZJ8 279 aaPredicted RBP8□□□□□ -1.13
HMGB2-202ENST00000438704 CYP4A22Q5TCH4 519 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms