RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 ELFN1P0C7U0 828 aa4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 DRD4P21917 467 aa4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 PDIA3P30101 505 aaKnown RBP4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 HTR7P34969 479 aa4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 CHKAP35790 457 aa4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 GRK6P43250 576 aa4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 TXNL4AP83876 142 aaKnown RBP4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 MTAPQ13126 283 aa4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 SEMA3BQ13214 749 aa4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 FHL3Q13643 280 aa4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 CCDC174Q6PII3 467 aa4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 DPY19L3Q6ZPD9 716 aa4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 CCDC117Q8IWD4 279 aaPredicted RBP4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 CLASRPQ8N2M8 674 aaKnown RBP4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 C12orf76Q8N812 135 aaPredicted RBP4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 TERB1Q8NA31 727 aa4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 ATG16L2Q8NAA4 619 aa4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 TRIM63Q969Q1 353 aa4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 DAZAP1Q96EP5 407 aaKnown RBP4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 BBC3Q96PG8 261 aaPredicted RBP4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 LENG8Q96PV6 779 aaPredicted RBP4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 MRIQ9BWK5 157 aa4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 IKZF4Q9H2S9 585 aa4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 AGO4Q9HCK5 861 aaKnown RBP4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 ALG13Q9NP73 1137 aaKnown RBP4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 LRFN1Q9P244 771 aa4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 ZNHIT2Q9UHR6 403 aa4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 WNT6Q9Y6F9 365 aa4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 EFCAB8A8MWE9 144 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 BTBD19C9JJ37 291 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 H7C1Q1 480 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 J3KTA2 159 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 CBFA2T3O75081 653 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 PROP1O75360 226 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 SLPIP03973 132 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 YY1P25490 414 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 TRAPPC10P48553 1259 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 HMGA2P52926 109 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 CCDC15Q0P6D6 951 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 DNASE1L3Q13609 305 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 CBFBQ13951 182 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 P3H1Q32P28 736 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 AASDHQ4L235 1098 aaPredicted RBP4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 TMEM196Q5HYL7 178 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 ANO1Q5XXA6 986 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 SUMO4Q6EEV6 95 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 CCDC144NLQ6NUI1 221 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 RINT1Q6NUQ1 792 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 KLHL17Q6TDP4 642 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 PCSK4Q6UW60 755 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 TRIM72Q6ZMU5 477 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 GPR150Q8NGU9 434 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 TRAPPC12Q8WVT3 735 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 WDYHV1Q96HA8 205 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 CCDC17Q96LX7 622 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 FYTTD1Q96QD9 318 aaKnown RBP4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 SNX18Q96RF0 628 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 KATNAL1Q9BW62 490 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 CIPCQ9C0C6 399 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 RIOX1Q9H6W3 641 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 PTPRHQ9HD43 1115 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 SEMA4GQ9NTN9 838 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 GAR1Q9NY12 217 aaKnown RBP4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 RIPOR2Q9Y4F9 1068 aa4.37□□□□□ -1.71
LSM1P1-201ENST00000438629 AQP12BA6NM10 295 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 TARM1B6A8C7 271 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 UBE2Q2LH0YL09 131 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 ASNA1O43681 348 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 EXOC3O60645 756 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 USP1O94782 785 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 MT-CO3P00414 261 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 DRD1P21728 446 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 ITPKBP27987 946 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 MCM5P33992 734 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 PBX1P40424 430 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 DIO1P49895 249 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 CFHR3Q02985 330 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 GALNT1Q10472 559 aaPredicted RBP4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 LMAN2Q12907 356 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 BFSP2Q13515 415 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 ZNF569Q5MCW4 686 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 FAM90A2PQ658T7 463 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 ERAP2Q6P179 960 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 NAPRTQ6XQN6 538 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 RFX8Q6ZV50 586 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 CACNA2D3Q8IZS8 1091 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 ADAMTS18Q8TE60 1221 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 STYXQ8WUJ0 223 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 SARAFQ96BY9 339 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 AGAP2Q99490 1192 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 PAAF1Q9BRP4 392 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 MYLK2Q9H1R3 596 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 KLK15Q9H2R5 256 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 EPS8L2Q9H6S3 715 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 SYNPO2LQ9H987 977 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 PPCSQ9HAB8 311 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 IL17RBQ9NRM6 502 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 FBXO28Q9NVF7 368 aa4.36□□□□□ -1.71
LSM1P1-201ENST00000438629 MAFFQ9ULX9 164 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms