RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 MSANTD2Q6P1R3 559 aa19.24■□□□□ 0.67
HLA-F-220ENST00000434407 BEND5Q7L4P6 421 aa19.24■□□□□ 0.67
HLA-F-220ENST00000434407 ZNF677Q86XU0 584 aa19.24■□□□□ 0.67
HLA-F-220ENST00000434407 SCUBE3Q8IX30 993 aa19.24■□□□□ 0.67
HLA-F-220ENST00000434407 MYO6Q9UM54 1294 aa19.24■□□□□ 0.67
HLA-F-220ENST00000434407 MRPS17Q9Y2R5 130 aaKnown RBP19.24■□□□□ 0.67
HLA-F-220ENST00000434407 MTF2Q9Y483 593 aaPredicted RBP19.24■□□□□ 0.67
HLA-F-220ENST00000434407 ATG2BQ96BY7 2078 aa19.24■□□□□ 0.67
HLA-F-220ENST00000434407 FYNP06241 537 aa19.23■□□□□ 0.67
HLA-F-220ENST00000434407 TARSP26639 723 aaKnown RBP19.23■□□□□ 0.67
HLA-F-220ENST00000434407 KPNA1P52294 538 aaPredicted RBP19.23■□□□□ 0.67
HLA-F-220ENST00000434407 NUBP1P53384 320 aa19.23■□□□□ 0.67
HLA-F-220ENST00000434407 COG7P83436 770 aa19.23■□□□□ 0.67
HLA-F-220ENST00000434407 EFEMP1Q12805 493 aa19.23■□□□□ 0.67
HLA-F-220ENST00000434407 TXNDC11Q6PKC3 985 aa19.23■□□□□ 0.67
HLA-F-220ENST00000434407 Q6ZNB5 142 aa19.23■□□□□ 0.67
HLA-F-220ENST00000434407 PASD1Q8IV76 773 aa19.23■□□□□ 0.67
HLA-F-220ENST00000434407 CCDC105Q8IYK2 499 aa19.23■□□□□ 0.67
HLA-F-220ENST00000434407 CPA6Q8N4T0 437 aa19.23■□□□□ 0.67
HLA-F-220ENST00000434407 C1orf131Q8NDD1 294 aaKnown RBP19.23■□□□□ 0.67
HLA-F-220ENST00000434407 FAM3CQ92520 227 aa19.23■□□□□ 0.67
HLA-F-220ENST00000434407 BAP1Q92560 729 aa19.23■□□□□ 0.67
HLA-F-220ENST00000434407 CLDN23Q96B33 292 aa19.23■□□□□ 0.67
HLA-F-220ENST00000434407 PPP1R13BQ96KQ4 1090 aa19.23■□□□□ 0.67
HLA-F-220ENST00000434407 TTYH3Q9C0H2 523 aa19.23■□□□□ 0.67
HLA-F-220ENST00000434407 MARCH2Q9P0N8 246 aa19.23■□□□□ 0.67
HLA-F-220ENST00000434407 TJP2Q9UDY2 1190 aa19.23■□□□□ 0.67
HLA-F-220ENST00000434407 SH3BP1Q9Y3L3 701 aa19.23■□□□□ 0.67
HLA-F-220ENST00000434407 SIT1Q9Y3P8 196 aa19.23■□□□□ 0.67
HLA-F-220ENST00000434407 CEP83Q9Y592 693 aa19.23■□□□□ 0.67
HLA-F-220ENST00000434407 MYO18AQ92614 2054 aaKnown RBP19.23■□□□□ 0.67
HLA-F-220ENST00000434407 FAM170BA6NMN3 283 aa19.22■□□□□ 0.67
HLA-F-220ENST00000434407 STK25O00506 426 aa19.22■□□□□ 0.67
HLA-F-220ENST00000434407 STC2O76061 302 aa19.22■□□□□ 0.67
HLA-F-220ENST00000434407 NFATC1O95644 943 aa19.22■□□□□ 0.67
HLA-F-220ENST00000434407 LSM8O95777 96 aaKnown RBP19.22■□□□□ 0.67
HLA-F-220ENST00000434407 CHRNB2P17787 502 aa19.22■□□□□ 0.67
HLA-F-220ENST00000434407 UBASH3AP57075 661 aa19.22■□□□□ 0.67
HLA-F-220ENST00000434407 CDR2Q01850 454 aa19.22■□□□□ 0.67
HLA-F-220ENST00000434407 GOLGA8FQ08AF8 430 aa19.22■□□□□ 0.67
HLA-F-220ENST00000434407 GOLGA8DPQ0D2H9 430 aa19.22■□□□□ 0.67
HLA-F-220ENST00000434407 GAB4Q2WGN9 574 aa19.22■□□□□ 0.67
HLA-F-220ENST00000434407 PTPN20Q4JDL3 420 aa19.22■□□□□ 0.67
HLA-F-220ENST00000434407 RSRC2Q7L4I2 434 aaKnown RBP19.22■□□□□ 0.67
HLA-F-220ENST00000434407 TMEM35BQ8NCS4 154 aa19.22■□□□□ 0.67
HLA-F-220ENST00000434407 TTC16Q8NEE8 873 aa19.22■□□□□ 0.67
HLA-F-220ENST00000434407 TTC8Q8TAM2 541 aa19.22■□□□□ 0.67
HLA-F-220ENST00000434407 EDEM1Q92611 657 aa19.22■□□□□ 0.67
HLA-F-220ENST00000434407 NOX5Q96PH1 765 aa19.22■□□□□ 0.67
HLA-F-220ENST00000434407 EDEM3Q9BZQ6 932 aa19.22■□□□□ 0.67
HLA-F-220ENST00000434407 MIS12Q9H081 205 aa19.22■□□□□ 0.67
HLA-F-220ENST00000434407 STRIP2Q9ULQ0 834 aa19.22■□□□□ 0.67
HLA-F-220ENST00000434407 TRDMT1O14717 391 aaKnown RBP19.21■□□□□ 0.67
HLA-F-220ENST00000434407 CYP17A1P05093 508 aa19.21■□□□□ 0.67
HLA-F-220ENST00000434407 MMEP08473 750 aa19.21■□□□□ 0.67
HLA-F-220ENST00000434407 GJA4P35212 333 aa19.21■□□□□ 0.67
HLA-F-220ENST00000434407 GABRB2P47870 512 aa19.21■□□□□ 0.67
HLA-F-220ENST00000434407 FMO1Q01740 532 aa19.21■□□□□ 0.67
HLA-F-220ENST00000434407 NR1H3Q13133 447 aa19.21■□□□□ 0.67
HLA-F-220ENST00000434407 UBXN2BQ14CS0 331 aa19.21■□□□□ 0.67
HLA-F-220ENST00000434407 DHCR24Q15392 516 aa19.21■□□□□ 0.67
HLA-F-220ENST00000434407 FIGNQ5HY92 759 aa19.21■□□□□ 0.67
HLA-F-220ENST00000434407 TAF3Q5VWG9 929 aa19.21■□□□□ 0.67
HLA-F-220ENST00000434407 RHBDF2Q6PJF5 856 aa19.21■□□□□ 0.67
HLA-F-220ENST00000434407 MIB1Q86YT6 1006 aa19.21■□□□□ 0.67
HLA-F-220ENST00000434407 BBS7Q8IWZ6 715 aa19.21■□□□□ 0.67
HLA-F-220ENST00000434407 RNF139Q8WU17 664 aa19.21■□□□□ 0.67
HLA-F-220ENST00000434407 SLC20A1Q8WUM9 679 aa19.21■□□□□ 0.67
HLA-F-220ENST00000434407 KCNH6Q9H252 994 aa19.21■□□□□ 0.67
HLA-F-220ENST00000434407 ASNSD1Q9NWL6 643 aa19.21■□□□□ 0.67
HLA-F-220ENST00000434407 RASAL2Q9UJF2 1139 aa19.21■□□□□ 0.67
HLA-F-220ENST00000434407 HBS1LQ9Y450 684 aaKnown RBP19.21■□□□□ 0.67
HLA-F-220ENST00000434407 SCAMP3O14828 347 aaKnown RBP19.2■□□□□ 0.66
HLA-F-220ENST00000434407 KLKB1P03952 638 aa19.2■□□□□ 0.66
HLA-F-220ENST00000434407 ERBB2P04626 1255 aa19.2■□□□□ 0.66
HLA-F-220ENST00000434407 CYP1A1P04798 512 aaPredicted RBP19.2■□□□□ 0.66
HLA-F-220ENST00000434407 GLI1P08151 1106 aa19.2■□□□□ 0.66
HLA-F-220ENST00000434407 IRF1P10914 325 aa19.2■□□□□ 0.66
HLA-F-220ENST00000434407 RPS9P46781 194 aaKnown RBP19.2■□□□□ 0.66
HLA-F-220ENST00000434407 SNX16P57768 344 aa19.2■□□□□ 0.66
HLA-F-220ENST00000434407 NOMO3P69849 1222 aa19.2■□□□□ 0.66
HLA-F-220ENST00000434407 AMPD2Q01433 879 aa19.2■□□□□ 0.66
HLA-F-220ENST00000434407 TRIP4Q15650 581 aaPredicted RBP19.2■□□□□ 0.66
HLA-F-220ENST00000434407 CACNA2D4Q7Z3S7 1137 aa19.2■□□□□ 0.66
HLA-F-220ENST00000434407 IRF2BP2Q7Z5L9 587 aa19.2■□□□□ 0.66
HLA-F-220ENST00000434407 FMNL3Q8IVF7 1028 aa19.2■□□□□ 0.66
HLA-F-220ENST00000434407 PLD4Q96BZ4 506 aa19.2■□□□□ 0.66
HLA-F-220ENST00000434407 PIWIL1Q96J94 861 aaKnown RBP19.2■□□□□ 0.66
HLA-F-220ENST00000434407 TRIM62Q9BVG3 475 aa19.2■□□□□ 0.66
HLA-F-220ENST00000434407 LSM7Q9UK45 103 aaKnown RBP19.2■□□□□ 0.66
HLA-F-220ENST00000434407 ZNF510Q9Y2H8 683 aa19.2■□□□□ 0.66
HLA-F-220ENST00000434407 SLC12A8A0AV02 714 aa19.19■□□□□ 0.66
HLA-F-220ENST00000434407 NCAM2O15394 837 aa19.19■□□□□ 0.66
HLA-F-220ENST00000434407 DCNP07585 359 aaKnown RBP19.19■□□□□ 0.66
HLA-F-220ENST00000434407 CHRNB1P11230 501 aa19.19■□□□□ 0.66
HLA-F-220ENST00000434407 MAGEA9P43362 315 aa19.19■□□□□ 0.66
HLA-F-220ENST00000434407 TMEM196Q5HYL7 178 aa19.19■□□□□ 0.66
HLA-F-220ENST00000434407 OLFML1Q6UWY5 402 aa19.19■□□□□ 0.66
HLA-F-220ENST00000434407 ZNF397Q8NF99 534 aaPredicted RBP19.19■□□□□ 0.66
HLA-F-220ENST00000434407 SPDYE1Q8NFV5 336 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms