RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 PAPSS1O43252 624 aaPredicted RBP16.23■□□□□ 0.19
TREX1-201ENST00000433541 GRAP2O75791 330 aa16.23■□□□□ 0.19
TREX1-201ENST00000433541 NFATC1O95644 943 aa16.23■□□□□ 0.19
TREX1-201ENST00000433541 ARSAP15289 507 aa16.23■□□□□ 0.19
TREX1-201ENST00000433541 PBX1P40424 430 aa16.23■□□□□ 0.19
TREX1-201ENST00000433541 RNASE9P60153 205 aaKnown RBP16.23■□□□□ 0.19
TREX1-201ENST00000433541 NOMO3P69849 1222 aa16.23■□□□□ 0.19
TREX1-201ENST00000433541 COG7P83436 770 aa16.23■□□□□ 0.19
TREX1-201ENST00000433541 NR1H3Q13133 447 aa16.23■□□□□ 0.19
TREX1-201ENST00000433541 TSR1Q2NL82 804 aaKnown RBP16.23■□□□□ 0.19
TREX1-201ENST00000433541 EFHC1Q5JVL4 640 aa16.23■□□□□ 0.19
TREX1-201ENST00000433541 TMEM31Q5JXX7 168 aa16.23■□□□□ 0.19
TREX1-201ENST00000433541 KLHDC10Q6PID8 442 aa16.23■□□□□ 0.19
TREX1-201ENST00000433541 BHLHA9Q7RTU4 235 aa16.23■□□□□ 0.19
TREX1-201ENST00000433541 SUGP1Q8IWZ8 645 aaKnown RBP16.23■□□□□ 0.19
TREX1-201ENST00000433541 SLC30A5Q8TAD4 765 aa16.23■□□□□ 0.19
TREX1-201ENST00000433541 RIN3Q8TB24 985 aa16.23■□□□□ 0.19
TREX1-201ENST00000433541 OSCP1Q8WVF1 389 aa16.23■□□□□ 0.19
TREX1-201ENST00000433541 C18orf8Q96DM3 657 aa16.23■□□□□ 0.19
TREX1-201ENST00000433541 ASIC4Q96FT7 647 aa16.23■□□□□ 0.19
TREX1-201ENST00000433541 KLF16Q9BXK1 252 aaPredicted RBP16.23■□□□□ 0.19
TREX1-201ENST00000433541 POPDC2Q9HBU9 364 aa16.23■□□□□ 0.19
TREX1-201ENST00000433541 TBC1D14Q9P2M4 693 aa16.23■□□□□ 0.19
TREX1-201ENST00000433541 E2F8A0AVK6 867 aa16.22■□□□□ 0.19
TREX1-201ENST00000433541 TCF3P15923 654 aa16.22■□□□□ 0.19
TREX1-201ENST00000433541 CHRNB2P17787 502 aa16.22■□□□□ 0.19
TREX1-201ENST00000433541 CASP14P31944 242 aa16.22■□□□□ 0.19
TREX1-201ENST00000433541 YWHAZP63104 245 aaKnown RBP16.22■□□□□ 0.19
TREX1-201ENST00000433541 ZBED6P86452 979 aa16.22■□□□□ 0.19
TREX1-201ENST00000433541 ZXDBP98169 803 aa16.22■□□□□ 0.19
TREX1-201ENST00000433541 RUNX3Q13761 415 aa16.22■□□□□ 0.19
TREX1-201ENST00000433541 UBXN2BQ14CS0 331 aa16.22■□□□□ 0.19
TREX1-201ENST00000433541 C2CD6Q53TS8 623 aa16.22■□□□□ 0.19
TREX1-201ENST00000433541 FAM102AQ5T9C2 384 aaPredicted RBP16.22■□□□□ 0.19
TREX1-201ENST00000433541 MMS22LQ6ZRQ5 1243 aa16.22■□□□□ 0.19
TREX1-201ENST00000433541 TMC6Q7Z403 805 aa16.22■□□□□ 0.19
TREX1-201ENST00000433541 VPS36Q86VN1 386 aa16.22■□□□□ 0.19
TREX1-201ENST00000433541 GAS2L3Q86XJ1 694 aa16.22■□□□□ 0.19
TREX1-201ENST00000433541 ZDHHC17Q8IUH5 632 aa16.22■□□□□ 0.19
TREX1-201ENST00000433541 ZFRQ96KR1 1074 aaKnown RBP16.22■□□□□ 0.19
TREX1-201ENST00000433541 C11orf70Q9BRQ4 267 aa16.22■□□□□ 0.19
TREX1-201ENST00000433541 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.22■□□□□ 0.19
TREX1-201ENST00000433541 TTYH3Q9C0H2 523 aa16.22■□□□□ 0.19
TREX1-201ENST00000433541 HAUS4Q9H6D7 363 aa16.22■□□□□ 0.19
TREX1-201ENST00000433541 TBC1D17Q9HA65 648 aa16.22■□□□□ 0.19
TREX1-201ENST00000433541 CAPN11Q9UMQ6 739 aa16.22■□□□□ 0.19
TREX1-201ENST00000433541 COL4A2P08572 1712 aa16.22■□□□□ 0.19
TREX1-201ENST00000433541 SYNJ2BP-COX16A0A087WUM0 186 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 KRBA1A5PL33 1030 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 TMCO5BA8MYB1 307 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 MSI1O43347 362 aaKnown RBP16.21■□□□□ 0.19
TREX1-201ENST00000433541 HSF2BPO75031 334 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 PDGFBP01127 241 aaPredicted RBP16.21■□□□□ 0.19
TREX1-201ENST00000433541 GYPCP04921 128 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 SKILP12757 684 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 CD72P21854 359 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 CDH5P33151 784 aaPredicted RBP16.21■□□□□ 0.19
TREX1-201ENST00000433541 SOX9P48436 509 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 RPL34P49207 117 aaKnown RBP16.21■□□□□ 0.19
TREX1-201ENST00000433541 AMPD2Q01433 879 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 SLC6A3Q01959 620 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 PRKCQQ04759 706 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 CLEC16AQ2KHT3 1053 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 DCAF6Q58WW2 860 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 VSTM4Q8IW00 320 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 ZNF276Q8N554 614 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 ADAM32Q8TC27 787 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 DCLK3Q9C098 648 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 LINC00597Q9H2U6 94 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 FAM204AQ9H8W3 233 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 ZNHIT6Q9NWK9 470 aaKnown RBP16.21■□□□□ 0.19
TREX1-201ENST00000433541 AIPL1Q9NZN9 384 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 COX16Q9P0S2 106 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 NDRG2Q9UN36 371 aaKnown RBP16.21■□□□□ 0.19
TREX1-201ENST00000433541 NAALADL1Q9UQQ1 740 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 MRPS17Q9Y2R5 130 aaKnown RBP16.21■□□□□ 0.19
TREX1-201ENST00000433541 MUC3AQ02505 3323 aa16.21■□□□□ 0.19
TREX1-201ENST00000433541 STC2O76061 302 aa16.2■□□□□ 0.18
TREX1-201ENST00000433541 CYP1A1P04798 512 aaPredicted RBP16.2■□□□□ 0.18
TREX1-201ENST00000433541 CORO1AP31146 461 aaKnown RBP16.2■□□□□ 0.18
TREX1-201ENST00000433541 HARS2P49590 506 aaKnown RBP16.2■□□□□ 0.18
TREX1-201ENST00000433541 CDK17Q00537 523 aa16.2■□□□□ 0.18
TREX1-201ENST00000433541 TAF5Q15542 800 aa16.2■□□□□ 0.18
TREX1-201ENST00000433541 ANO4Q32M45 955 aa16.2■□□□□ 0.18
TREX1-201ENST00000433541 EML3Q32P44 896 aa16.2■□□□□ 0.18
TREX1-201ENST00000433541 SARM1Q6SZW1 724 aa16.2■□□□□ 0.18
TREX1-201ENST00000433541 OLFML1Q6UWY5 402 aa16.2■□□□□ 0.18
TREX1-201ENST00000433541 ZNF852Q6ZMS4 543 aa16.2■□□□□ 0.18
TREX1-201ENST00000433541 IRF2BP2Q7Z5L9 587 aa16.2■□□□□ 0.18
TREX1-201ENST00000433541 PHLDB2Q86SQ0 1253 aa16.2■□□□□ 0.18
TREX1-201ENST00000433541 DENND1CQ8IV53 801 aa16.2■□□□□ 0.18
TREX1-201ENST00000433541 BBS7Q8IWZ6 715 aa16.2■□□□□ 0.18
TREX1-201ENST00000433541 FAM3CQ92520 227 aa16.2■□□□□ 0.18
TREX1-201ENST00000433541 RNF34Q969K3 372 aa16.2■□□□□ 0.18
TREX1-201ENST00000433541 PLD4Q96BZ4 506 aa16.2■□□□□ 0.18
TREX1-201ENST00000433541 PIWIL1Q96J94 861 aaKnown RBP16.2■□□□□ 0.18
TREX1-201ENST00000433541 SERPINB11Q96P15 392 aa16.2■□□□□ 0.18
TREX1-201ENST00000433541 FAM83CQ9BQN1 747 aa16.2■□□□□ 0.18
TREX1-201ENST00000433541 C8orf33Q9H7E9 229 aaPredicted RBP16.2■□□□□ 0.18
TREX1-201ENST00000433541 TRPV5Q9NQA5 729 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms