RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 GPAT2Q6NUI2 795 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 SCARA5Q6ZMJ2 495 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 CPXCR1Q8N123 301 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 ACER1Q8TDN7 264 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 TFB1MQ8WVM0 346 aaKnown RBP11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 GMCL1Q96IK5 515 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 ZFRQ96KR1 1074 aaKnown RBP11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 CEP170P1Q96L14 293 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 RIT2Q99578 217 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 TIMMDC1Q9NPL8 285 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 FBXO28Q9NVF7 368 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 TJP2Q9UDY2 1190 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 PTPRJQ12913 1337 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 KDELR1P24390 212 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 CRKP46108 304 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 HADHQ16836 314 aaKnown RBP11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 ANGEL2Q5VTE6 544 aaKnown RBP11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 CASC4Q6P4E1 433 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 C15orf52Q6ZUT6 534 aaKnown RBP11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 MARVELD2Q8N4S9 558 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 JOSD2Q8TAC2 188 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 RIN3Q8TB24 985 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 DEPDC1BQ8WUY9 529 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 ZNF778Q96MU6 729 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 EPB41L1Q9H4G0 881 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 CAAP1Q9H8G2 361 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 SLC17A6Q9P2U8 582 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 ARHGAP26Q9UNA1 814 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 LAMB2P55268 1798 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 SF3B1O75533 1304 aaKnown RBP eCLIP11.94□□□□□ -0.55e-6■■■■□ 20.1
HMGCS1-202ENST00000433297 GOLGA8QA0A0J9YX86 632 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 GOLGA8OA6NCC3 632 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 GOLGA8NF8WBI6 632 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 KCNN4O15554 427 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 CALB1P05937 261 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 CD19P15391 556 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 CD1EP15812 388 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 EMP3P54852 163 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 ROR1Q01973 937 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 LPIN1Q14693 890 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 KBTBD6Q86V97 674 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 ZBTB8BQ8NAP8 495 aaPredicted RBP11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 PGBD4Q96DM1 585 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 ZBTB45Q96K62 511 aaPredicted RBP11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 DCUN1D5Q9BTE7 237 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 PFDN4Q9NQP4 134 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 TBC1D22BQ9NU19 505 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 MRPL11Q9Y3B7 192 aaKnown RBP11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 CNTNAP2Q9UHC6 1331 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 IL1BP01584 269 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 KRT3P12035 628 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 OSBPP22059 807 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 IDH3AP50213 366 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 PSMD7P51665 324 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 FLOT2Q14254 428 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 ZACNQ401N2 412 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 N4BP2L1Q5TBK1 243 aaPredicted RBP11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 OGFRL1Q5TC84 451 aaPredicted RBP11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 PRR5LQ6MZQ0 368 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 PGM2L1Q6PCE3 622 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 SH3BP5LQ7L8J4 393 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 DPH6Q7L8W6 267 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 UNC5BQ8IZJ1 945 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 KCNK16Q96T55 309 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 ACSS2Q9NR19 701 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 PSMD13Q9UNM6 376 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 TTLL3Q9Y4R7 772 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 ZC3H11AO75152 810 aaKnown RBP eCLIP11.94□□□□□ -0.54e-23■■■□□ 16.2
HMGCS1-202ENST00000433297 SNNO75324 88 aaPredicted RBP11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 VNN1O95497 513 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 STAMBPO95630 424 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 EIF2AK2P19525 551 aaKnown RBP11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 NAA20P61599 178 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 MTMR1Q13613 665 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 LRRC38Q5VT99 294 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 LPCAT2Q7L5N7 544 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 ZNF410Q86VK4 478 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 ADGRF2Q8IZF7 708 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 TTLL6Q8N841 843 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 TMEM35BQ8NCS4 154 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 CDRT15Q96T59 188 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 SEMA6AQ9H2E6 1030 aa11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 PIH1D1Q9NWS0 290 aaKnown RBP11.94□□□□□ -0.5
HMGCS1-202ENST00000433297 ASTN2O75129 1339 aaPredicted RBP11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 PIK3R2O00459 728 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 NEMP1O14524 444 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 DENRO43583 198 aaKnown RBP11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 LRCH4O75427 683 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 COX4I1P13073 169 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 YWHAZP63104 245 aaKnown RBP11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 CDKL1Q00532 357 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 BSPRYQ5W0U4 402 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 ITPRIPL1Q6GPH6 555 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 BBS12Q6ZW61 710 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 PTAR1Q7Z6K3 402 aaPredicted RBP11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 GMCL1P1Q8NEA9 526 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 GRIN3AQ8TCU5 1115 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 RNPEPQ9H4A4 650 aa11.93□□□□□ -0.5
HMGCS1-202ENST00000433297 NRDE2Q9H7Z3 1164 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms