RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 KIF11P52732 1056 aa17.05■□□□□ 0.32
ACTB-205ENST00000432588 SHC2P98077 582 aa17.05■□□□□ 0.32
ACTB-205ENST00000432588 LMAN2Q12907 356 aa17.05■□□□□ 0.32
ACTB-205ENST00000432588 ST3GAL2Q16842 350 aa17.05■□□□□ 0.32
ACTB-205ENST00000432588 MAP7D1Q3KQU3 841 aa17.05■□□□□ 0.32
ACTB-205ENST00000432588 KRT39Q6A163 491 aa17.05■□□□□ 0.32
ACTB-205ENST00000432588 TPGS1Q6ZTW0 290 aa17.05■□□□□ 0.32
ACTB-205ENST00000432588 CCDC186Q7Z3E2 898 aa17.05■□□□□ 0.32
ACTB-205ENST00000432588 SYT12Q8IV01 421 aa17.05■□□□□ 0.32
ACTB-205ENST00000432588 TMEFF1Q8IYR6 380 aa17.05■□□□□ 0.32
ACTB-205ENST00000432588 FAXDC2Q96IV6 333 aa17.05■□□□□ 0.32
ACTB-205ENST00000432588 NUSAP1Q9BXS6 441 aaKnown RBP17.05■□□□□ 0.32
ACTB-205ENST00000432588 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.05■□□□□ 0.324e-25■□□□□ 10.3
ACTB-205ENST00000432588 OSER1Q9NX31 292 aa17.05■□□□□ 0.32
ACTB-205ENST00000432588 MARK1Q9P0L2 795 aa17.05■□□□□ 0.32
ACTB-205ENST00000432588 NAGPAQ9UK23 515 aa17.05■□□□□ 0.32
ACTB-205ENST00000432588 MYH10P35580 1976 aa17.05■□□□□ 0.32
ACTB-205ENST00000432588 THADAQ6YHU6 1953 aa17.05■□□□□ 0.32
ACTB-205ENST00000432588 PATE3B3GLJ2 98 aa17.04■□□□□ 0.32
ACTB-205ENST00000432588 AP5Z1O43299 807 aa17.04■□□□□ 0.32
ACTB-205ENST00000432588 STX10O60499 249 aa17.04■□□□□ 0.32
ACTB-205ENST00000432588 GREM1O60565 184 aa17.04■□□□□ 0.32
ACTB-205ENST00000432588 HOXD12P35452 270 aa17.04■□□□□ 0.32
ACTB-205ENST00000432588 NOVA1P51513 510 aaKnown RBP17.04■□□□□ 0.32
ACTB-205ENST00000432588 IRX4P78413 519 aa17.04■□□□□ 0.32
ACTB-205ENST00000432588 EDRF1Q3B7T1 1238 aa17.04■□□□□ 0.32
ACTB-205ENST00000432588 TRIM61Q5EBN2 209 aa17.04■□□□□ 0.32
ACTB-205ENST00000432588 LYSMD4Q5XG99 296 aa17.04■□□□□ 0.32
ACTB-205ENST00000432588 SLC36A4Q6YBV0 504 aa17.04■□□□□ 0.32
ACTB-205ENST00000432588 ARMCX6Q7L4S7 300 aa17.04■□□□□ 0.32
ACTB-205ENST00000432588 CHPFQ8IZ52 775 aa17.04■□□□□ 0.32
ACTB-205ENST00000432588 HEXIM2Q96MH2 286 aaKnown RBP17.04■□□□□ 0.32
ACTB-205ENST00000432588 DUSP16Q9BY84 665 aa17.04■□□□□ 0.32
ACTB-205ENST00000432588 NMUR1Q9HB89 426 aa17.04■□□□□ 0.32
ACTB-205ENST00000432588 MBD1Q9UIS9 605 aaPredicted RBP17.04■□□□□ 0.32
ACTB-205ENST00000432588 ZDHHC9Q9Y397 364 aa17.04■□□□□ 0.32
ACTB-205ENST00000432588 NUP205Q92621 2012 aa17.04■□□□□ 0.32
ACTB-205ENST00000432588 TRIM24O15164 1050 aa17.03■□□□□ 0.32
ACTB-205ENST00000432588 ZNF202O95125 648 aa17.03■□□□□ 0.32
ACTB-205ENST00000432588 GABRG2P18507 467 aa17.03■□□□□ 0.32
ACTB-205ENST00000432588 WASP42768 502 aa17.03■□□□□ 0.32
ACTB-205ENST00000432588 PTGER3P43115 390 aa17.03■□□□□ 0.32
ACTB-205ENST00000432588 DGKGP49619 791 aa17.03■□□□□ 0.32
ACTB-205ENST00000432588 MXI1P50539 228 aa17.03■□□□□ 0.32
ACTB-205ENST00000432588 SLC8A3P57103 927 aa17.03■□□□□ 0.32
ACTB-205ENST00000432588 RPL6Q02878 288 aaKnown RBP17.03■□□□□ 0.32
ACTB-205ENST00000432588 ZCWPW2Q504Y3 356 aa17.03■□□□□ 0.32
ACTB-205ENST00000432588 ZNF394Q53GI3 561 aa17.03■□□□□ 0.32
ACTB-205ENST00000432588 PPP1R26Q5T8A7 1209 aaPredicted RBP17.03■□□□□ 0.32
ACTB-205ENST00000432588 EGFLAMQ63HQ2 1017 aa17.03■□□□□ 0.32
ACTB-205ENST00000432588 ZNF276Q8N554 614 aa17.03■□□□□ 0.32
ACTB-205ENST00000432588 FBXL13Q8NEE6 735 aa17.03■□□□□ 0.32
ACTB-205ENST00000432588 FAM124BQ9H5Z6 455 aaPredicted RBP17.03■□□□□ 0.32
ACTB-205ENST00000432588 CLIC5Q9NZA1 410 aa17.03■□□□□ 0.32
ACTB-205ENST00000432588 ZNF510Q9Y2H8 683 aa17.03■□□□□ 0.32
ACTB-205ENST00000432588 CDX4O14627 284 aaPredicted RBP17.02■□□□□ 0.32
ACTB-205ENST00000432588 MDM4O15151 490 aa17.02■□□□□ 0.32
ACTB-205ENST00000432588 CETN3O15182 167 aa17.02■□□□□ 0.32
ACTB-205ENST00000432588 ZNF217O75362 1048 aa17.02■□□□□ 0.32
ACTB-205ENST00000432588 EPB41P11171 864 aaKnown RBP17.02■□□□□ 0.32
ACTB-205ENST00000432588 COG7P83436 770 aa17.02■□□□□ 0.32
ACTB-205ENST00000432588 SH3PXD2AQ5TCZ1 1133 aa17.02■□□□□ 0.32
ACTB-205ENST00000432588 RABEPKQ7Z6M1 372 aa17.02■□□□□ 0.32
ACTB-205ENST00000432588 MIB1Q86YT6 1006 aa17.02■□□□□ 0.32
ACTB-205ENST00000432588 ARHGAP18Q8N392 663 aa17.02■□□□□ 0.32
ACTB-205ENST00000432588 FRMD1Q8N878 549 aa17.02■□□□□ 0.32
ACTB-205ENST00000432588 BHMTQ93088 406 aa17.02■□□□□ 0.32
ACTB-205ENST00000432588 DCLK3Q9C098 648 aa17.02■□□□□ 0.32
ACTB-205ENST00000432588 CISHQ9NSE2 258 aa17.02■□□□□ 0.32
ACTB-205ENST00000432588 RAB20Q9NX57 234 aa17.02■□□□□ 0.32
ACTB-205ENST00000432588 CALCOCO1Q9P1Z2 691 aa17.02■□□□□ 0.32
ACTB-205ENST00000432588 NUDT5Q9UKK9 219 aa17.02■□□□□ 0.32
ACTB-205ENST00000432588 USP3Q9Y6I4 520 aa17.02■□□□□ 0.32
ACTB-205ENST00000432588 A0A1W2PQF6 199 aa17.01■□□□□ 0.31
ACTB-205ENST00000432588 STC2O76061 302 aa17.01■□□□□ 0.31
ACTB-205ENST00000432588 CEACAM1P13688 526 aa17.01■□□□□ 0.31
ACTB-205ENST00000432588 CSRP1P21291 193 aaKnown RBP17.01■□□□□ 0.31
ACTB-205ENST00000432588 CHKAP35790 457 aa17.01■□□□□ 0.31
ACTB-205ENST00000432588 UAP1L1Q3KQV9 507 aa17.01■□□□□ 0.31
ACTB-205ENST00000432588 Q6ZNB5 142 aa17.01■□□□□ 0.31
ACTB-205ENST00000432588 SCD5Q86SK9 330 aa17.01■□□□□ 0.31
ACTB-205ENST00000432588 CEP76Q8TAP6 659 aa17.01■□□□□ 0.31
ACTB-205ENST00000432588 IPO4Q8TEX9 1081 aaKnown RBP17.01■□□□□ 0.31
ACTB-205ENST00000432588 TMEM176AQ96HP8 235 aa17.01■□□□□ 0.31
ACTB-205ENST00000432588 GOLPH3LQ9H4A5 285 aa17.01■□□□□ 0.31
ACTB-205ENST00000432588 RMND1Q9NWS8 449 aa17.01■□□□□ 0.31
ACTB-205ENST00000432588 PILRBQ9UKJ0 227 aa17.01■□□□□ 0.31
ACTB-205ENST00000432588 STRIP2Q9ULQ0 834 aa17.01■□□□□ 0.31
ACTB-205ENST00000432588 USP24Q9UPU5 2620 aa17■□□□□ 0.31
ACTB-205ENST00000432588 MYO18AQ92614 2054 aaKnown RBP17■□□□□ 0.31
ACTB-205ENST00000432588 GFRA2O00451 464 aa17■□□□□ 0.31
ACTB-205ENST00000432588 KRT37O76014 449 aa17■□□□□ 0.31
ACTB-205ENST00000432588 CFIP05156 583 aa17■□□□□ 0.31
ACTB-205ENST00000432588 ITPKAP23677 461 aa17■□□□□ 0.31
ACTB-205ENST00000432588 MAPK8P45983 427 aa17■□□□□ 0.31
ACTB-205ENST00000432588 ATXN3P54252 364 aaPredicted RBP17■□□□□ 0.31
ACTB-205ENST00000432588 MCCD1P59942 119 aaPredicted RBP17■□□□□ 0.31
ACTB-205ENST00000432588 ZNF252P-AS1Q0IIN9 211 aa17■□□□□ 0.31
ACTB-205ENST00000432588 SLC23A3Q6PIS1 610 aa17■□□□□ 0.31
ACTB-205ENST00000432588 TOGARAM2Q6ZUX3 1019 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms