RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 MAP4K1Q92918 833 aa3.99□□□□□ -1.77
CLK1-204ENST00000432425 LRRC46Q96FV0 321 aa3.99□□□□□ -1.77
CLK1-204ENST00000432425 FAM50BQ9Y247 325 aa3.99□□□□□ -1.77
CLK1-204ENST00000432425 COL15A1P39059 1388 aa3.99□□□□□ -1.77
CLK1-204ENST00000432425 POM121BA6NF01 834 aa3.98□□□□□ -1.77
CLK1-204ENST00000432425 FYB1O15117 783 aa3.98□□□□□ -1.77
CLK1-204ENST00000432425 KPNA5O15131 536 aa3.98□□□□□ -1.77
CLK1-204ENST00000432425 CA12O43570 354 aa3.98□□□□□ -1.77
CLK1-204ENST00000432425 CCNT2O60583 730 aaKnown RBP3.98□□□□□ -1.77
CLK1-204ENST00000432425 ATICP31939 592 aa3.98□□□□□ -1.77
CLK1-204ENST00000432425 GPC5P78333 572 aa3.98□□□□□ -1.77
CLK1-204ENST00000432425 GPS1Q13098 491 aa3.98□□□□□ -1.77
CLK1-204ENST00000432425 PFKFB3Q16875 520 aaPredicted RBP3.98□□□□□ -1.77
CLK1-204ENST00000432425 TMTC4Q5T4D3 741 aa3.98□□□□□ -1.77
CLK1-204ENST00000432425 CCAR1Q8IX12 1150 aaKnown RBP3.98□□□□□ -1.77
CLK1-204ENST00000432425 NANOGP1Q8N7R0 232 aa3.98□□□□□ -1.77
CLK1-204ENST00000432425 ZBTB26Q9HCK0 441 aa3.98□□□□□ -1.77
CLK1-204ENST00000432425 TMOD4Q9NZQ9 345 aa3.98□□□□□ -1.77
CLK1-204ENST00000432425 FZD4Q9ULV1 537 aa3.98□□□□□ -1.77
CLK1-204ENST00000432425 CLCA1A8K7I4 914 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 COQ9O75208 318 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 FGBP02675 491 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 IGKV2-30P06310 120 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 MYL4P12829 197 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 ATF7P17544 494 aaPredicted RBP3.97□□□□□ -1.77
CLK1-204ENST00000432425 TACR3P29371 465 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 HTR7P34969 479 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 DGKQP52824 942 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 ZNF543Q08ER8 600 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 IFIT5Q13325 482 aaKnown RBP3.97□□□□□ -1.77
CLK1-204ENST00000432425 SLC14A1Q13336 389 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 COBLL1Q53SF7 1204 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 FAXCQ5TGI0 409 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 SHC4Q6S5L8 630 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 CRTC1Q6UUV9 634 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 BEND5Q7L4P6 421 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 MRPL10Q7Z7H8 261 aaKnown RBP3.97□□□□□ -1.77
CLK1-204ENST00000432425 ZNF366Q8N895 744 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.97□□□□□ -1.77
CLK1-204ENST00000432425 ABHD5Q8WTS1 349 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 ZC3H10Q96K80 434 aaKnown RBP3.97□□□□□ -1.77
CLK1-204ENST00000432425 ZNF48Q96MX3 618 aaPredicted RBP3.97□□□□□ -1.77
CLK1-204ENST00000432425 TMEM79Q9BSE2 394 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 ADGRE3Q9BY15 652 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 MAGEB5Q9BZ81 275 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 CHPF2Q9P2E5 772 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 AREL1O15033 823 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 PRAMEF2O60811 474 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 PARNO95453 639 aaKnown RBP3.97□□□□□ -1.77
CLK1-204ENST00000432425 TMIGD3P0DMS9 266 aaPredicted RBP3.97□□□□□ -1.77
CLK1-204ENST00000432425 IDEP14735 1019 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 FGFR2P21802 821 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 JAK3P52333 1124 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 ZNF91Q05481 1191 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 SAFBQ15424 915 aaKnown RBP eCLIP3.97□□□□□ -1.77
CLK1-204ENST00000432425 KLHDC7AQ5VTJ3 777 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 GRHL2Q6ISB3 625 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 USP17L6PQ6QN14 398 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 C16orf52Q8NHV5 167 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.97□□□□□ -1.77
CLK1-204ENST00000432425 SUN3Q8TAQ9 357 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 HMCESQ96FZ2 354 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 AS3MTQ9HBK9 375 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 ARL8BQ9NVJ2 186 aa3.97□□□□□ -1.77
CLK1-204ENST00000432425 ADAM10O14672 748 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 KIF3BO15066 747 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 TSHRP16473 764 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 GALNSP34059 522 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 STT3AP46977 705 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 CCT4P50991 539 aaKnown RBP3.96□□□□□ -1.78
CLK1-204ENST00000432425 CASP5P51878 434 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 ID2Q02363 134 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 MTAPQ13126 283 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 DNASE1L3Q13609 305 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 LAMB3Q13751 1172 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 ACOX1Q15067 660 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 SEC23BQ15437 767 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 ABLIM2Q6H8Q1 611 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 Q8N9P0 234 aaPredicted RBP3.96□□□□□ -1.78
CLK1-204ENST00000432425 COQ8BQ96D53 544 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 KAZALD1Q96I82 304 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 C8orf48Q96LL4 319 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 SIGLEC11Q96RL6 698 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 SARGQ9BW04 601 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 NUAK2Q9H093 628 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 SAP30LQ9HAJ7 183 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 VPS45Q9NRW7 570 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 MYO1AQ9UBC5 1043 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 SPATA31A1Q5TZJ5 1347 aa3.96□□□□□ -1.78
CLK1-204ENST00000432425 A0A087WZ62 844 aa3.95□□□□□ -1.78
CLK1-204ENST00000432425 SOCS2O14508 198 aa3.95□□□□□ -1.78
CLK1-204ENST00000432425 APOL1O14791 398 aa3.95□□□□□ -1.78
CLK1-204ENST00000432425 SLC3A2P08195 630 aaKnown RBP3.95□□□□□ -1.78
CLK1-204ENST00000432425 PBX1P40424 430 aa3.95□□□□□ -1.78
CLK1-204ENST00000432425 NR4A2P43354 598 aa3.95□□□□□ -1.78
CLK1-204ENST00000432425 PRIM2P49643 509 aa3.95□□□□□ -1.78
CLK1-204ENST00000432425 WDR5P61964 334 aaKnown RBP3.95□□□□□ -1.78
CLK1-204ENST00000432425 RPS13P62277 151 aaKnown RBP3.95□□□□□ -1.78
CLK1-204ENST00000432425 YPEL5P62699 121 aa3.95□□□□□ -1.78
CLK1-204ENST00000432425 HSF1Q00613 529 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms