RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 SGPL1O95470 568 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 LYNP07948 512 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 TRIM49P0CI25 452 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 TRIM49CP0CI26 452 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 FGFR1P11362 822 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 UNGP13051 313 aaPredicted RBP8.38□□□□□ -1.07
VTI1A-202ENST00000432306 AKR1B1P15121 316 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 CYP11B1P15538 503 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 PTPN7P35236 360 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 ADCY8P40145 1251 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 MAPK9P45984 424 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 IREB2P48200 963 aaKnown RBP8.38□□□□□ -1.07
VTI1A-202ENST00000432306 CDK7P50613 346 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 GPC3P51654 580 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 VAMP7P51809 220 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 CDK16Q00536 496 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 PPP3CAQ08209 521 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 PWP1Q13610 501 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 GRM2Q14416 872 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 MORF4L2Q15014 288 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 SLC1A5Q15758 541 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 ARHGAP44Q17R89 818 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 TRMT5Q32P41 509 aaKnown RBP8.38□□□□□ -1.07
VTI1A-202ENST00000432306 WDR72Q3MJ13 1102 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 PLA2G2CQ5R387 149 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 INTS11Q5TA45 600 aaKnown RBP8.38□□□□□ -1.07
VTI1A-202ENST00000432306 IZUMO3Q5VZ72 239 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 AAGABQ6PD74 315 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 NET1Q7Z628 596 aaPredicted RBP8.38□□□□□ -1.07
VTI1A-202ENST00000432306 FAM178BQ8IXR5 827 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 RBM12BQ8IXT5 1001 aaKnown RBP8.38□□□□□ -1.07
VTI1A-202ENST00000432306 LRRC47Q8N1G4 583 aaKnown RBP8.38□□□□□ -1.07
VTI1A-202ENST00000432306 MYCT1Q8N699 235 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 ZNF511Q8NB15 262 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 POF1BQ8WVV4 589 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 ZNF653Q96CK0 615 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 OPTNQ96CV9 577 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 KREMEN1Q96MU8 473 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 P2RX7Q99572 595 aaKnown RBP8.38□□□□□ -1.07
VTI1A-202ENST00000432306 OSBPL8Q9BZF1 889 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 COA1Q9GZY4 146 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 SAP130Q9H0E3 1048 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 C1orf21Q9H246 121 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 KCNK13Q9HB14 408 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 TAS2R1Q9NYW7 299 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 ATXN10Q9UBB4 475 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 CIDEBQ9UHD4 219 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 SHOC2Q9UQ13 582 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 DRG1Q9Y295 367 aaKnown RBP8.38□□□□□ -1.07
VTI1A-202ENST00000432306 PCDHA1Q9Y5I3 950 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 NUMBLQ9Y6R0 609 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 OTOFQ9HC10 1997 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 EMSYQ7Z589 1322 aa8.38□□□□□ -1.07
VTI1A-202ENST00000432306 RNF223E7ERA6 249 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 MEIS1O00470 390 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 KRT36O76013 467 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 TPPPO94811 219 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 IMPDH2P12268 514 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 GSTT1P30711 240 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 RPA3P35244 121 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-202ENST00000432306 MFAP3P55082 362 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 TMED2Q15363 201 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 TBCCQ15814 346 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 CCDC6Q16204 474 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 SUPT20HL1Q3ZLR7 823 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.37□□□□□ -1.07
VTI1A-202ENST00000432306 LIN52Q52LA3 116 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 LRRC23Q53EV4 343 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-202ENST00000432306 ZC2HC1CQ53FD0 456 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-202ENST00000432306 PRR16Q569H4 304 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 KIAA0319Q5VV43 1072 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 TTBK2Q6IQ55 1244 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 PPP1R2P3Q6NXS1 205 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 RFWD3Q6PCD5 774 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 KYAT3Q6YP21 454 aaKnown RBP8.37□□□□□ -1.07
VTI1A-202ENST00000432306 ZNF365Q70YC5 407 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 ENOSF1Q7L5Y1 443 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 MTDHQ86UE4 582 aaKnown RBP8.37□□□□□ -1.07
VTI1A-202ENST00000432306 MYLK4Q86YV6 388 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-202ENST00000432306 LSMEM1Q8N8F7 131 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 EXD1Q8NHP7 514 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 IPCEF1Q8WWN9 437 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-202ENST00000432306 PPP2R3CQ969Q6 453 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 PPP1R14BQ96C90 147 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 ZMAT2Q96NC0 199 aaKnown RBP8.37□□□□□ -1.07
VTI1A-202ENST00000432306 NT5C1AQ9BXI3 368 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 DEFB129Q9H1M3 183 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 SUDS3Q9H7L9 328 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-202ENST00000432306 CD209Q9NNX6 404 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 MAN1C1Q9NR34 630 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 SEPT11Q9NVA2 429 aaKnown RBP8.37□□□□□ -1.07
VTI1A-202ENST00000432306 NYAP2Q9P242 653 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 TBK1Q9UHD2 729 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 SMIM31A0A1B0GVY4 71 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 TRIM64A6NGJ6 449 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 TRIM64BA6NI03 449 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 FOXO6A8MYZ6 492 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 E7ESA3 106 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 H0Y3Z8 333 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 GYG2O15488 501 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms