RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 M0QZQ0 153 aa20.35■□□□□ 0.85
VRK2-205ENST00000432057 NDC80O14777 642 aa20.35■□□□□ 0.85
VRK2-205ENST00000432057 CYP11A1P05108 521 aa20.35■□□□□ 0.85
VRK2-205ENST00000432057 NOS2P35228 1153 aa20.35■□□□□ 0.85
VRK2-205ENST00000432057 MDH1P40925 334 aaKnown RBP20.35■□□□□ 0.85
VRK2-205ENST00000432057 IFI35P80217 286 aaPredicted RBP20.35■□□□□ 0.85
VRK2-205ENST00000432057 FASTKD3Q14CZ7 662 aaKnown RBP20.35■□□□□ 0.85
VRK2-205ENST00000432057 ZSCAN26Q16670 478 aa20.35■□□□□ 0.85
VRK2-205ENST00000432057 FAM182AQ5T1J6 154 aa20.35■□□□□ 0.85
VRK2-205ENST00000432057 SYPL2Q5VXT5 272 aa20.35■□□□□ 0.85
VRK2-205ENST00000432057 PCGF5Q86SE9 256 aa20.35■□□□□ 0.85
VRK2-205ENST00000432057 PPIL6Q8IXY8 311 aa20.35■□□□□ 0.85
VRK2-205ENST00000432057 PYROXD2Q8N2H3 581 aa20.35■□□□□ 0.85
VRK2-205ENST00000432057 SMARCD1Q96GM5 515 aa20.35■□□□□ 0.85
VRK2-205ENST00000432057 NPY6RQ99463 290 aa20.35■□□□□ 0.85
VRK2-205ENST00000432057 ROPN1BQ9BZX4 212 aaPredicted RBP20.35■□□□□ 0.85
VRK2-205ENST00000432057 ROPN1Q9HAT0 212 aaPredicted RBP20.35■□□□□ 0.85
VRK2-205ENST00000432057 VWA8A3KMH1 1905 aa20.34■□□□□ 0.85
VRK2-205ENST00000432057 HHLA1C9JL84 531 aa20.34■□□□□ 0.85
VRK2-205ENST00000432057 INPPL1O15357 1258 aa20.34■□□□□ 0.85
VRK2-205ENST00000432057 FBXO21O94952 628 aa20.34■□□□□ 0.85
VRK2-205ENST00000432057 INTS6LQ5JSJ4 861 aaKnown RBP20.34■□□□□ 0.85
VRK2-205ENST00000432057 CLLU1OSQ5K130 101 aa20.34■□□□□ 0.85
VRK2-205ENST00000432057 HP1BP3Q5SSJ5 553 aaPredicted RBP20.34■□□□□ 0.85
VRK2-205ENST00000432057 BNIPLQ7Z465 357 aa20.34■□□□□ 0.85
VRK2-205ENST00000432057 NT5C3BQ969T7 300 aa20.34■□□□□ 0.85
VRK2-205ENST00000432057 TMEM209Q96SK2 561 aa20.34■□□□□ 0.85
VRK2-205ENST00000432057 RABEP2Q9H5N1 569 aa20.34■□□□□ 0.85
VRK2-205ENST00000432057 POPDC2Q9HBU9 364 aa20.34■□□□□ 0.85
VRK2-205ENST00000432057 TMPRSS4Q9NRS4 437 aa20.34■□□□□ 0.85
VRK2-205ENST00000432057 TMLHEQ9NVH6 421 aa20.34■□□□□ 0.85
VRK2-205ENST00000432057 FZD10Q9ULW2 581 aa20.34■□□□□ 0.85
VRK2-205ENST00000432057 YJEFN3A6XGL0 299 aa20.33■□□□□ 0.85
VRK2-205ENST00000432057 E7ENQ6 273 aa20.33■□□□□ 0.85
VRK2-205ENST00000432057 BANF1O75531 89 aa20.33■□□□□ 0.85
VRK2-205ENST00000432057 AGTP01019 485 aa20.33■□□□□ 0.85
VRK2-205ENST00000432057 GRK4P32298 578 aa20.33■□□□□ 0.85
VRK2-205ENST00000432057 RAB41Q5JT25 222 aa20.33■□□□□ 0.85
VRK2-205ENST00000432057 MFSD5Q6N075 450 aa20.33■□□□□ 0.85
VRK2-205ENST00000432057 NAT8LQ8N9F0 302 aa20.33■□□□□ 0.85
VRK2-205ENST00000432057 OR10T2Q8NGX3 314 aa20.33■□□□□ 0.85
VRK2-205ENST00000432057 LRRN4Q8WUT4 740 aa20.33■□□□□ 0.85
VRK2-205ENST00000432057 ZNF296Q8WUU4 475 aaPredicted RBP20.33■□□□□ 0.85
VRK2-205ENST00000432057 CSPG4P5Q96PW8 444 aa20.33■□□□□ 0.85
VRK2-205ENST00000432057 ACBD6Q9BR61 282 aa20.33■□□□□ 0.85
VRK2-205ENST00000432057 STAP1Q9ULZ2 295 aa20.33■□□□□ 0.85
VRK2-205ENST00000432057 NAALADL1Q9UQQ1 740 aa20.33■□□□□ 0.85
VRK2-205ENST00000432057 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.33■□□□□ 0.85
VRK2-205ENST00000432057 COL4A4P53420 1690 aaPredicted RBP20.33■□□□□ 0.85
VRK2-205ENST00000432057 SCN5AQ14524 2016 aa20.33■□□□□ 0.84
VRK2-205ENST00000432057 TCRBV7S3A2A0A539 114 aa20.33■□□□□ 0.84
VRK2-205ENST00000432057 M0QYT0 321 aa20.33■□□□□ 0.84
VRK2-205ENST00000432057 FKTNO75072 461 aa20.33■□□□□ 0.84
VRK2-205ENST00000432057 TMEM63AO94886 807 aa20.33■□□□□ 0.84
VRK2-205ENST00000432057 FYNP06241 537 aa20.33■□□□□ 0.84
VRK2-205ENST00000432057 USP17L7P0C7H9 530 aa20.33■□□□□ 0.84
VRK2-205ENST00000432057 GOT1P17174 413 aa20.33■□□□□ 0.84
VRK2-205ENST00000432057 BASP1P80723 227 aaKnown RBP20.33■□□□□ 0.84
VRK2-205ENST00000432057 OVOS1Q6IE37 1185 aa20.33■□□□□ 0.84
VRK2-205ENST00000432057 FAM171BQ6P995 826 aa20.33■□□□□ 0.84
VRK2-205ENST00000432057 GLB1LQ6UWU2 654 aa20.33■□□□□ 0.84
VRK2-205ENST00000432057 SLC24A5Q71RS6 500 aa20.33■□□□□ 0.84
VRK2-205ENST00000432057 SUSD3Q96L08 255 aa20.33■□□□□ 0.84
VRK2-205ENST00000432057 PKMYT1Q99640 499 aa20.33■□□□□ 0.84
VRK2-205ENST00000432057 USP29Q9HBJ7 922 aa20.33■□□□□ 0.84
VRK2-205ENST00000432057 CWC15Q9P013 229 aaKnown RBP20.33■□□□□ 0.84
VRK2-205ENST00000432057 CTNNAL1Q9UBT7 734 aa20.33■□□□□ 0.84
VRK2-205ENST00000432057 DSEQ9UL01 958 aa20.33■□□□□ 0.84
VRK2-205ENST00000432057 A6NNZ2 444 aa20.32■□□□□ 0.84
VRK2-205ENST00000432057 ARVCFO00192 962 aa20.32■□□□□ 0.84
VRK2-205ENST00000432057 KCNN4O15554 427 aa20.32■□□□□ 0.84
VRK2-205ENST00000432057 BDNFP23560 247 aa20.32■□□□□ 0.84
VRK2-205ENST00000432057 RBL1P28749 1068 aa20.32■□□□□ 0.84
VRK2-205ENST00000432057 STIP1P31948 543 aaKnown RBP20.32■□□□□ 0.84
VRK2-205ENST00000432057 LSP1P33241 339 aa20.32■□□□□ 0.84
VRK2-205ENST00000432057 RDXP35241 583 aaKnown RBP20.32■□□□□ 0.84
VRK2-205ENST00000432057 HTRA3P83110 453 aa20.32■□□□□ 0.84
VRK2-205ENST00000432057 GBE1Q04446 702 aa20.32■□□□□ 0.84
VRK2-205ENST00000432057 PDIA2Q13087 525 aaKnown RBP20.32■□□□□ 0.84
VRK2-205ENST00000432057 NME3Q13232 169 aa20.32■□□□□ 0.84
VRK2-205ENST00000432057 TUBB8Q3ZCM7 444 aa20.32■□□□□ 0.84
VRK2-205ENST00000432057 TNFAIP8L3Q5GJ75 292 aa20.32■□□□□ 0.84
VRK2-205ENST00000432057 DCLRE1AQ6PJP8 1040 aa20.32■□□□□ 0.84
VRK2-205ENST00000432057 CENPUQ71F23 418 aa20.32■□□□□ 0.84
VRK2-205ENST00000432057 ZNF280BQ86YH2 543 aa20.32■□□□□ 0.84
VRK2-205ENST00000432057 ZBED8Q8IZ13 594 aa20.32■□□□□ 0.84
VRK2-205ENST00000432057 CNGB3Q9NQW8 809 aa20.32■□□□□ 0.84
VRK2-205ENST00000432057 PIGVQ9NUD9 493 aa20.32■□□□□ 0.84
VRK2-205ENST00000432057 PHF24Q9UPV7 400 aa20.32■□□□□ 0.84
VRK2-205ENST00000432057 MFHAS1Q9Y4C4 1052 aa20.32■□□□□ 0.84
VRK2-205ENST00000432057 USP3Q9Y6I4 520 aa20.32■□□□□ 0.84
VRK2-205ENST00000432057 TANC1Q9C0D5 1861 aa20.31■□□□□ 0.84
VRK2-205ENST00000432057 DDHD2O94830 711 aa20.31■□□□□ 0.84
VRK2-205ENST00000432057 ZBED1O96006 694 aa20.31■□□□□ 0.84
VRK2-205ENST00000432057 ABHD2P08910 425 aa20.31■□□□□ 0.84
VRK2-205ENST00000432057 DEUP1Q05D60 604 aa20.31■□□□□ 0.84
VRK2-205ENST00000432057 HIF1AQ16665 826 aa20.31■□□□□ 0.84
VRK2-205ENST00000432057 CCDC38Q502W7 563 aa20.31■□□□□ 0.84
VRK2-205ENST00000432057 FOXR1Q6PIV2 292 aa20.31■□□□□ 0.84
VRK2-205ENST00000432057 CCDC13Q8IYE1 715 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms