RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 ELF2Q15723 593 aa9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 HSF5Q4G112 596 aaPredicted RBP9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 AASDHQ4L235 1098 aaPredicted RBP9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ZCWPW2Q504Y3 356 aa9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 LY6G5CQ5SRR4 150 aa9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ANO7Q6IWH7 933 aa9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 INTS8Q75QN2 995 aaKnown RBP9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 C11orf74Q86VG3 221 aa9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 GUF1Q8N442 669 aaKnown RBP9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ALLCQ8N6M5 410 aa9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 C12orf50Q8NA57 414 aaPredicted RBP9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 IL17RCQ8NAC3 791 aa9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 MDGA1Q8NFP4 955 aa9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 SNIP1Q8TAD8 396 aaKnown RBP9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TAS1R2Q8TE23 839 aa9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 DDX1Q92499 740 aaKnown RBP9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 WBP2Q969T9 261 aa9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TWNKQ96RR1 684 aa9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 SMOC1Q9H4F8 434 aa9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 FBXO44Q9H4M3 255 aa9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 APOBEC3GQ9HC16 384 aaKnown RBP9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 FAM49BQ9NUQ9 324 aa9.95□□□□□ -0.82
CDC42-IT1-201ENST00000431803 USP24Q9UPU5 2620 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 CACNA1BQ00975 2339 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 MYOFQ9NZM1 2061 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 BCLAF3A2AJT9 711 aaKnown RBP9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 SGK1O00141 431 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TLR5O60602 858 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ADAM23O75077 832 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 RHOBTB1O94844 696 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 APODP05090 189 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 FAM200BP0CF97 657 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TRIM49P0CI25 452 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TRIM49CP0CI26 452 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TNFRSF4P43489 277 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 GCLMP48507 274 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 MAP3K7CLP57077 242 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 GAD2Q05329 585 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 PPP3CAQ08209 521 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 USP39Q53GS9 565 aaKnown RBP9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 STPG1Q5TH74 334 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 PMS2CLQ68D20 193 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TCEAL6Q6IPX3 200 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 KRBA2Q6ZNG9 492 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 CLEC20AQ6ZU45 233 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 GPRIN1Q7Z2K8 1008 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 BBS7Q8IWZ6 715 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 CCDC33Q8N5R6 958 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 OLIG1Q8TAK6 271 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TCEAL3Q969E4 200 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 CNTNAP3BQ96NU0 1288 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 HNRNPABQ99729 332 aaKnown RBP9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 CNTNAP3Q9BZ76 1288 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TPSD1Q9BZJ3 242 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 IMPG2Q9BZV3 1241 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 NIF3L1Q9GZT8 377 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 SCAND2PQ9GZW5 306 aaPredicted RBP9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 GOLPH3LQ9H4A5 285 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 CYP3A43Q9HB55 503 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 PNPLA8Q9NP80 782 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 CYLDQ9NQC7 956 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ARHGEF4Q9NR80 690 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 SCML2Q9UQR0 700 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 SH3BP1Q9Y3L3 701 aa9.94□□□□□ -0.82
CDC42-IT1-201ENST00000431803 CFAP47Q6ZTR5 3102 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ZZEF1O43149 2961 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ZFHX4Q86UP3 3567 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 MAP1BP46821 2468 aaKnown RBP9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 CYP26A1O43174 497 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 CILPO75339 1184 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TULP3O75386 442 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 KLF8O95600 359 aaPredicted RBP9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 CAVIN2O95810 425 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TBX18O95935 607 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 BCKDHBP21953 392 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ADORA2BP29275 332 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 GBP1P32455 592 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 GTF2H1P32780 548 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 PSMC2P35998 433 aaKnown RBP9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 SH3BP2P78314 561 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 KDSRQ06136 332 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 LINC01559Q495D7 138 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 EMC10Q5UCC4 262 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 IL31Q6EBC2 164 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 KLHDC10Q6PID8 442 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 HTR3DQ70Z44 454 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TMEM25Q86YD3 366 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 FAM186BQ8IYM0 893 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ABCA7Q8IZY2 2146 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TXNDC5Q8NBS9 432 aaKnown RBP9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 WHAMMQ8TF30 809 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 CCDC47Q96A33 483 aaKnown RBP9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 NT5C1AQ9BXI3 368 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 KLF16Q9BXK1 252 aaPredicted RBP9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TMEM8AQ9HCN3 771 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.93□□□□□ -0.823e-10■■■■■ 62.1
CDC42-IT1-201ENST00000431803 TLR8Q9NR97 1041 aaKnown RBP9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 SPHK2Q9NRA0 654 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 OSER1Q9NX31 292 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 MAPK8IP1Q9UQF2 711 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms