RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 CETN3O15182 167 aa17.12■□□□□ 0.33
PTPRA-206ENST00000430705 SLC16A3O15427 465 aaKnown RBP17.12■□□□□ 0.33
PTPRA-206ENST00000430705 RHOBTB1O94844 696 aa17.12■□□□□ 0.33
PTPRA-206ENST00000430705 TYRP14679 529 aa17.12■□□□□ 0.33
PTPRA-206ENST00000430705 USP39Q53GS9 565 aaKnown RBP17.12■□□□□ 0.33
PTPRA-206ENST00000430705 DCAF17Q5H9S7 520 aaPredicted RBP17.12■□□□□ 0.33
PTPRA-206ENST00000430705 RAB41Q5JT25 222 aa17.12■□□□□ 0.33
PTPRA-206ENST00000430705 EOGTQ5NDL2 527 aa17.12■□□□□ 0.33
PTPRA-206ENST00000430705 C10orf120Q5SQS8 335 aa17.12■□□□□ 0.33
PTPRA-206ENST00000430705 ARHGAP17Q68EM7 881 aa17.12■□□□□ 0.33
PTPRA-206ENST00000430705 TPGS1Q6ZTW0 290 aa17.12■□□□□ 0.33
PTPRA-206ENST00000430705 ZNF276Q8N554 614 aa17.12■□□□□ 0.33
PTPRA-206ENST00000430705 ZNF513Q8N8E2 541 aaPredicted RBP17.12■□□□□ 0.33
PTPRA-206ENST00000430705 SLC35C1Q96A29 364 aa17.12■□□□□ 0.33
PTPRA-206ENST00000430705 TMEM176AQ96HP8 235 aa17.12■□□□□ 0.33
PTPRA-206ENST00000430705 FAXDC2Q96IV6 333 aa17.12■□□□□ 0.33
PTPRA-206ENST00000430705 CNTNAP3BQ96NU0 1288 aa17.12■□□□□ 0.33
PTPRA-206ENST00000430705 CNTNAP3Q9BZ76 1288 aa17.12■□□□□ 0.33
PTPRA-206ENST00000430705 DNAJC17Q9NVM6 304 aaKnown RBP17.12■□□□□ 0.33
PTPRA-206ENST00000430705 DNMT3LQ9UJW3 386 aa17.12■□□□□ 0.33
PTPRA-206ENST00000430705 NAGPAQ9UK23 515 aa17.12■□□□□ 0.33
PTPRA-206ENST00000430705 ASPMQ8IZT6 3477 aa17.12■□□□□ 0.33
PTPRA-206ENST00000430705 TBC1D3BA6NDS4 549 aa17.11■□□□□ 0.33
PTPRA-206ENST00000430705 CAVIN2O95810 425 aa17.11■□□□□ 0.33
PTPRA-206ENST00000430705 CISD3P0C7P0 127 aa17.11■□□□□ 0.33
PTPRA-206ENST00000430705 CD44P16070 742 aaKnown RBP17.11■□□□□ 0.33
PTPRA-206ENST00000430705 WASP42768 502 aa17.11■□□□□ 0.33
PTPRA-206ENST00000430705 BTBD8Q5XKL5 378 aa17.11■□□□□ 0.33
PTPRA-206ENST00000430705 GRAMD4Q6IC98 578 aa17.11■□□□□ 0.33
PTPRA-206ENST00000430705 PIGZQ86VD9 579 aa17.11■□□□□ 0.33
PTPRA-206ENST00000430705 CCDC150Q8NCX0 1101 aa17.11■□□□□ 0.33
PTPRA-206ENST00000430705 HMGB4Q8WW32 186 aa17.11■□□□□ 0.33
PTPRA-206ENST00000430705 HEXIM2Q96MH2 286 aaKnown RBP17.11■□□□□ 0.33
PTPRA-206ENST00000430705 GSDMAQ96QA5 445 aa17.11■□□□□ 0.33
PTPRA-206ENST00000430705 EDEM2Q9BV94 578 aa17.11■□□□□ 0.33
PTPRA-206ENST00000430705 BBS2Q9BXC9 721 aa17.11■□□□□ 0.33
PTPRA-206ENST00000430705 RMND1Q9NWS8 449 aa17.11■□□□□ 0.33
PTPRA-206ENST00000430705 CLIC5Q9NZA1 410 aa17.11■□□□□ 0.33
PTPRA-206ENST00000430705 STARD13Q9Y3M8 1113 aa17.11■□□□□ 0.33
PTPRA-206ENST00000430705 ACACBO00763 2458 aa17.11■□□□□ 0.33
PTPRA-206ENST00000430705 MYO18AQ92614 2054 aaKnown RBP17.11■□□□□ 0.33
PTPRA-206ENST00000430705 WDFY3Q8IZQ1 3526 aa17.1■□□□□ 0.33
PTPRA-206ENST00000430705 MUC22E2RYF6 1773 aaPredicted RBP17.1■□□□□ 0.33
PTPRA-206ENST00000430705 GABRG2P18507 467 aa17.1■□□□□ 0.33
PTPRA-206ENST00000430705 CUL2Q13617 745 aa17.1■□□□□ 0.33
PTPRA-206ENST00000430705 NDRG1Q92597 394 aaKnown RBP17.1■□□□□ 0.33
PTPRA-206ENST00000430705 BHMTQ93088 406 aa17.1■□□□□ 0.33
PTPRA-206ENST00000430705 POLMQ9NP87 494 aaPredicted RBP17.1■□□□□ 0.33
PTPRA-206ENST00000430705 CD93Q9NPY3 652 aa17.1■□□□□ 0.33
PTPRA-206ENST00000430705 PLK2Q9NYY3 685 aa17.1■□□□□ 0.33
PTPRA-206ENST00000430705 RASAL2Q9UJF2 1139 aa17.1■□□□□ 0.33
PTPRA-206ENST00000430705 LSM7Q9UK45 103 aaKnown RBP17.1■□□□□ 0.33
PTPRA-206ENST00000430705 FBXO10Q9UK96 956 aa17.1■□□□□ 0.33
PTPRA-206ENST00000430705 CEP295Q9C0D2 2601 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 STX10O60499 249 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 ALDH1A2O94788 518 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 PENKP01210 267 aaPredicted RBP17.09■□□□□ 0.33
PTPRA-206ENST00000430705 HOXB2P14652 356 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 TRIM21P19474 475 aaKnown RBP17.09■□□□□ 0.33
PTPRA-206ENST00000430705 BMP6P22004 513 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 PTGER3P43115 390 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 PLA2G4AP47712 749 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 PSEN1P49768 467 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 EFEMP1Q12805 493 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 GOLGA7BQ2TAP0 167 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 TCERG1LQ5VWI1 586 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 FYB2Q5VWT5 728 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 IL31Q6EBC2 164 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 KIAA1211LQ6NV74 962 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 CYP2U1Q7Z449 544 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 C11orf74Q86VG3 221 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 ANKRD52Q8NB46 1076 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 KCNV2Q8TDN2 545 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 ERLEC1Q96DZ1 483 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 UBXN6Q9BZV1 441 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 CALCOCO1Q9P1Z2 691 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 TSPAN16Q9UKR8 245 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 USP24Q9UPU5 2620 aa17.09■□□□□ 0.33
PTPRA-206ENST00000430705 CNOT1A5YKK6 2376 aaKnown RBP17.08■□□□□ 0.33
PTPRA-206ENST00000430705 PCDH15Q96QU1 1955 aa17.08■□□□□ 0.33
PTPRA-206ENST00000430705 ATXN2Q99700 1313 aaKnown RBP17.08■□□□□ 0.32
PTPRA-206ENST00000430705 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.08■□□□□ 0.32
PTPRA-206ENST00000430705 HMBSP08397 361 aa17.08■□□□□ 0.32
PTPRA-206ENST00000430705 DHPSP49366 369 aaPredicted RBP17.08■□□□□ 0.32
PTPRA-206ENST00000430705 FKBP3Q00688 224 aaKnown RBP17.08■□□□□ 0.32
PTPRA-206ENST00000430705 LRRC63Q05C16 580 aa17.08■□□□□ 0.32
PTPRA-206ENST00000430705 PDE4CQ08493 712 aa17.08■□□□□ 0.32
PTPRA-206ENST00000430705 GOLGA8FQ08AF8 430 aa17.08■□□□□ 0.32
PTPRA-206ENST00000430705 GOLGA8DPQ0D2H9 430 aa17.08■□□□□ 0.32
PTPRA-206ENST00000430705 RNF43Q68DV7 783 aa17.08■□□□□ 0.32
PTPRA-206ENST00000430705 ARMCX6Q7L4S7 300 aa17.08■□□□□ 0.32
PTPRA-206ENST00000430705 TMEFF1Q8IYR6 380 aa17.08■□□□□ 0.32
PTPRA-206ENST00000430705 TTC39CQ8N584 583 aa17.08■□□□□ 0.32
PTPRA-206ENST00000430705 SMARCE1Q969G3 411 aa17.08■□□□□ 0.32
PTPRA-206ENST00000430705 TIGD1Q96MW7 591 aa17.08■□□□□ 0.32
PTPRA-206ENST00000430705 TSG101Q99816 390 aa17.08■□□□□ 0.32
PTPRA-206ENST00000430705 GABRG3Q99928 467 aa17.08■□□□□ 0.32
PTPRA-206ENST00000430705 ZSWIM1Q9BR11 485 aa17.08■□□□□ 0.32
PTPRA-206ENST00000430705 LSM14BQ9BX40 385 aaKnown RBP17.08■□□□□ 0.32
PTPRA-206ENST00000430705 ULBP1Q9BZM6 244 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms