RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 MBD1Q9UIS9 605 aaPredicted RBP12.41□□□□□ -0.42
HDAC4-202ENST00000430200 COQ4Q9Y3A0 265 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 CACNA1EQ15878 2313 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 ATXN2Q99700 1313 aaKnown RBP12.4□□□□□ -0.42
HDAC4-202ENST00000430200 PLXNA2O75051 1894 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 A0A1W2PQF6 199 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 NEDD8-MDP1E9PL57 170 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 TM4SF5O14894 197 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 CETN3O15182 167 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 APODP05090 189 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 ZNF806P0C7X5 589 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 GRIA2P42262 883 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 MRPS21P82921 87 aaKnown RBP12.4□□□□□ -0.42
HDAC4-202ENST00000430200 LRMPQ12912 555 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 CUL2Q13617 745 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 ANO4Q32M45 955 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 RAB41Q5JT25 222 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 C10orf76Q5T2E6 689 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 TCERG1LQ5VWI1 586 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 ARHGAP17Q68EM7 881 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 KIAA1211LQ6NV74 962 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 TTI2Q6NXR4 508 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 TPGS1Q6ZTW0 290 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 TFAP2BQ92481 460 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 OTUB2Q96DC9 234 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 TMEM176AQ96HP8 235 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 GSDMAQ96QA5 445 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 RTKNQ9BST9 563 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 NACA2Q9H009 215 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 SLC6A17Q9H1V8 727 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 PLK2Q9NYY3 685 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 MARK1Q9P0L2 795 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 TBC1D14Q9P2M4 693 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 NAGPAQ9UK23 515 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 CLEC4EQ9ULY5 219 aa12.4□□□□□ -0.42
HDAC4-202ENST00000430200 FREM2Q5SZK8 3169 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 TCRBV21S2A2A0A5A6 115 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 LNP1A1A4G5 178 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 BCLAF3A2AJT9 711 aaKnown RBP12.39□□□□□ -0.43
HDAC4-202ENST00000430200 HMBSP08397 361 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 TYRP14679 529 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 GABRG2P18507 467 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 P2RY2P41231 377 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 GAD2Q05329 585 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 PDE4CQ08493 712 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 MAP7D1Q3KQU3 841 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 AASDHQ4L235 1098 aaPredicted RBP12.39□□□□□ -0.43
HDAC4-202ENST00000430200 PPM1JQ5JR12 505 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 C10orf120Q5SQS8 335 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 KLHDC10Q6PID8 442 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 ARMCX6Q7L4S7 300 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 LMO3Q8TAP4 145 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 HMGB4Q8WW32 186 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 SMARCE1Q969G3 411 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 LOXL4Q96JB6 756 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 BBS2Q9BXC9 721 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 ULBP1Q9BZM6 244 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 DNAJC17Q9NVM6 304 aaKnown RBP12.39□□□□□ -0.43
HDAC4-202ENST00000430200 RMND1Q9NWS8 449 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 RASAL2Q9UJF2 1139 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 TSPAN16Q9UKR8 245 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 RAD54BQ9Y620 910 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 CACNA1BQ00975 2339 aa12.39□□□□□ -0.43
HDAC4-202ENST00000430200 IGF2RP11717 2491 aa12.38□□□□□ -0.43
HDAC4-202ENST00000430200 PPP1R3GB7ZBB8 358 aa12.38□□□□□ -0.43
HDAC4-202ENST00000430200 RNF225M0QZC1 329 aaPredicted RBP12.38□□□□□ -0.43
HDAC4-202ENST00000430200 O00370 1275 aa12.38□□□□□ -0.43
HDAC4-202ENST00000430200 BIN1O00499 593 aa12.38□□□□□ -0.43
HDAC4-202ENST00000430200 CISD3P0C7P0 127 aa12.38□□□□□ -0.43
HDAC4-202ENST00000430200 GBP1P32455 592 aa12.38□□□□□ -0.43
HDAC4-202ENST00000430200 ATP5C1P36542 298 aaKnown RBP12.38□□□□□ -0.43
HDAC4-202ENST00000430200 PTGER3P43115 390 aa12.38□□□□□ -0.43
HDAC4-202ENST00000430200 FMO5P49326 533 aa12.38□□□□□ -0.43
HDAC4-202ENST00000430200 CREB5Q02930 508 aa12.38□□□□□ -0.43
HDAC4-202ENST00000430200 LRRC63Q05C16 580 aa12.38□□□□□ -0.43
HDAC4-202ENST00000430200 EFEMP1Q12805 493 aa12.38□□□□□ -0.43
HDAC4-202ENST00000430200 PKDCCQ504Y2 493 aa12.38□□□□□ -0.43
HDAC4-202ENST00000430200 FYB2Q5VWT5 728 aa12.38□□□□□ -0.43
HDAC4-202ENST00000430200 ARHGEF19Q8IW93 802 aa12.38□□□□□ -0.43
HDAC4-202ENST00000430200 ZNF513Q8N8E2 541 aaPredicted RBP12.38□□□□□ -0.43
HDAC4-202ENST00000430200 HEXIM2Q96MH2 286 aaKnown RBP12.38□□□□□ -0.43
HDAC4-202ENST00000430200 MED15Q96RN5 788 aa12.38□□□□□ -0.43
HDAC4-202ENST00000430200 CALCOCO1Q9P1Z2 691 aa12.38□□□□□ -0.43
HDAC4-202ENST00000430200 DEC1Q9P2X7 70 aa12.38□□□□□ -0.43
HDAC4-202ENST00000430200 CTNND2Q9UQB3 1225 aa12.38□□□□□ -0.43
HDAC4-202ENST00000430200 PCDHGA5Q9Y5G8 931 aa12.38□□□□□ -0.43
HDAC4-202ENST00000430200 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.37□□□□□ -0.43
HDAC4-202ENST00000430200 WASH3PC4AMC7 463 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 PIK3R2O00459 728 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 MSI1O43347 362 aaKnown RBP12.37□□□□□ -0.43
HDAC4-202ENST00000430200 PENKP01210 267 aaPredicted RBP12.37□□□□□ -0.43
HDAC4-202ENST00000430200 ADRB1P08588 477 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 NDUFV2P19404 249 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 CORO1AP31146 461 aaKnown RBP12.37□□□□□ -0.43
HDAC4-202ENST00000430200 TNFRSF4P43489 277 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 TKTL1P51854 596 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 LIMK1P53667 647 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 YWHAGP61981 247 aaKnown RBP eCLIP12.37□□□□□ -0.43
HDAC4-202ENST00000430200 FKBP3Q00688 224 aaKnown RBP12.37□□□□□ -0.43
HDAC4-202ENST00000430200 ADIGQ0VDE8 80 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms