RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 NUP93Q8N1F7 819 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 TTC39CQ8N584 583 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 MYEOVQ96EZ4 313 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 ZNF512Q96ME7 567 aaPredicted RBP9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 TRPC7Q9HCX4 862 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 C2orf16Q68DN1 1984 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 ATG2BQ96BY7 2078 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 DDX3YO15523 660 aaKnown RBP9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 LTFP02788 710 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 IGFBP4P22692 258 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 SULT1E1P49888 294 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 KCNQ1P51787 676 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 ERVK-21P61565 698 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 YWHAGP61981 247 aaKnown RBP eCLIP9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 RAB33AQ14088 237 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 ZNF268Q14587 947 aaPredicted RBP9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 NFE2Q16621 373 aaPredicted RBP9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 PPP6R3Q5H9R7 873 aaPredicted RBP9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 TAC4Q86UU9 113 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 C11orf84Q9BUA3 381 aaPredicted RBP9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 UBXN6Q9BZV1 441 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 ZNF576Q9H609 170 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 ABCB6Q9NP58 842 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 MSRAQ9UJ68 235 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 BACE2Q9Y5Z0 518 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 COL4A4P53420 1690 aaPredicted RBP9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 PATJQ8NI35 1801 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 CTAGE9A4FU28 777 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 CLASP2O75122 1294 aaKnown RBP9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 GPD1P21695 349 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 ANXA13P27216 316 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 ELF1P32519 619 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 IRAK1P51617 712 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 AMPD2Q01433 879 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 MLLT1Q03111 559 aaPredicted RBP9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 TUBB2AQ13885 445 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 SMC1AQ14683 1233 aaKnown RBP9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 C10orf76Q5T2E6 689 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 LILRA6Q6PI73 481 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 FMNL3Q8IVF7 1028 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 RHOT2Q8IXI1 618 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 TRIM58Q8NG06 486 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 ATG4AQ8WYN0 398 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 P2RY11Q96G91 374 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 OSBPL9Q96SU4 736 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 NAPGQ99747 312 aaPredicted RBP9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 TUBB2BQ9BVA1 445 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 TSGA10Q9BZW7 698 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 SIK2Q9H0K1 926 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 PRO3102Q9H379 93 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 DDIT4Q9NX09 232 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 AFF4Q9UHB7 1163 aaKnown RBP9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 USP3Q9Y6I4 520 aa9.94□□□□□ -0.82
HMGCLL1-206ENST00000428842 PROSCO94903 275 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 GLP2RO95838 553 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 MYL4P12829 197 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 YWHAQP27348 245 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 RPL34P49207 117 aaKnown RBP9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 VCPP55072 806 aaKnown RBP9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 STILQ15468 1287 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 MAPRE1Q15691 268 aaKnown RBP9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 GRASPQ7Z6J2 395 aaPredicted RBP9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 SLFN11Q7Z7L1 901 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 TAB3Q8N5C8 712 aaPredicted RBP9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 MAB21L3Q8N8X9 362 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 RIN3Q8TB24 985 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 GOLGA1Q92805 767 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 CD101Q93033 1021 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 HSFY1Q96LI6 401 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 TLE6Q9H808 572 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 POPDC2Q9HBU9 364 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 LUC7LQ9NQ29 371 aaKnown RBP9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 AVENQ9NQS1 362 aaPredicted RBP9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 CCL26Q9Y258 94 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 MTCL1Q9Y4B5 1905 aaKnown RBP9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 CCDC195A0A1B0GUA6 201 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 GOLGA6L7A0A1B0GV03 622 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 C5orf67F2Z3F1 127 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 CEP104O60308 925 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 GLUD1P00367 558 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 RARAP10276 462 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 SDC4P31431 198 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 ALDH1A3P47895 512 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 PEX5P50542 639 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 ZNF143P52747 638 aaPredicted RBP9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 SLC25A11Q02978 314 aaKnown RBP9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 C2orf54Q08AI8 447 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 TAF12Q16514 161 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 TCEAL5Q5H9L2 206 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 C10orf120Q5SQS8 335 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 ZNF771Q7L3S4 317 aaPredicted RBP9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 SLC26A9Q7LBE3 791 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 CIR1Q86X95 450 aaPredicted RBP9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 CCDC50Q8IVM0 306 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 ARL14EPQ8N8R7 260 aaPredicted RBP9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 SPPL2BQ8TCT7 592 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 DQX1Q8TE96 717 aaKnown RBP9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 KCTD13Q8WZ19 329 aa9.93□□□□□ -0.82
HMGCLL1-206ENST00000428842 ZSWIM3Q96MP5 696 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms