RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 ZNF667Q5HYK9 610 aa11.9□□□□□ -0.51
CECR3-201ENST00000428828 PHLDB3Q6NSJ2 640 aa11.9□□□□□ -0.51
CECR3-201ENST00000428828 KLC3Q6P597 504 aa11.9□□□□□ -0.51
CECR3-201ENST00000428828 CEP128Q6ZU80 1094 aa11.9□□□□□ -0.51
CECR3-201ENST00000428828 LRRC8CQ8TDW0 803 aa11.9□□□□□ -0.51
CECR3-201ENST00000428828 KAT5Q92993 513 aa11.9□□□□□ -0.51
CECR3-201ENST00000428828 HIC2Q96JB3 615 aa11.9□□□□□ -0.51
CECR3-201ENST00000428828 XYLT2Q9H1B5 865 aa11.9□□□□□ -0.51
CECR3-201ENST00000428828 OCEL1Q9H607 264 aa11.9□□□□□ -0.51
CECR3-201ENST00000428828 CWH43Q9H720 699 aa11.9□□□□□ -0.51
CECR3-201ENST00000428828 UBE2TQ9NPD8 197 aaPredicted RBP11.9□□□□□ -0.51
CECR3-201ENST00000428828 ZDHHC18Q9NUE0 388 aa11.9□□□□□ -0.51
CECR3-201ENST00000428828 APEX2Q9UBZ4 518 aa11.9□□□□□ -0.51
CECR3-201ENST00000428828 SNX9Q9Y5X1 595 aa11.9□□□□□ -0.51
CECR3-201ENST00000428828 LRRC53A6NM62 1247 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 NRP1O14786 923 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 SPTLC1O15269 473 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 NOL4O94818 638 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 FTCDO95954 541 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 ASLP04424 464 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 PIM1P11309 404 aaPredicted RBP11.89□□□□□ -0.51
CECR3-201ENST00000428828 CPA3P15088 417 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 MYOGP15173 224 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 ZNF24P17028 368 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 GM2AP17900 193 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 ATP5DP30049 168 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 BRCC3P46736 316 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 BCAR1P56945 870 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 ITGA9Q13797 1035 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 SLC18A3Q16572 532 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 SV2CQ496J9 727 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 TMEM259Q4ZIN3 620 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 LIN52Q52LA3 116 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 RASIP1Q5U651 963 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 SFMBT2Q5VUG0 894 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 DDX42Q86XP3 938 aaKnown RBP eCLIP11.89□□□□□ -0.51
CECR3-201ENST00000428828 CMTR2Q8IYT2 770 aaKnown RBP11.89□□□□□ -0.51
CECR3-201ENST00000428828 UCMAQ8WVF2 138 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 UROC1Q96N76 676 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 YIPF2Q9BWQ6 316 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 GANQ9H2C0 597 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 INSL6Q9Y581 213 aa11.89□□□□□ -0.51
CECR3-201ENST00000428828 KPNA7A9QM74 516 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 KCNK3O14649 394 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 PFDN1O60925 122 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 PABPC4LP0CB38 370 aaKnown RBP11.88□□□□□ -0.51
CECR3-201ENST00000428828 UCHL3P15374 230 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 CD58P19256 250 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 ANXA13P27216 316 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 ATICP31939 592 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 RPL9P32969 192 aaKnown RBP11.88□□□□□ -0.51
CECR3-201ENST00000428828 PNPLA4P41247 253 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 LILRA4P59901 499 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 HTRA4P83105 476 aaPredicted RBP11.88□□□□□ -0.51
CECR3-201ENST00000428828 MLLT1Q03111 559 aaPredicted RBP11.88□□□□□ -0.51
CECR3-201ENST00000428828 GFPT1Q06210 699 aaPredicted RBP11.88□□□□□ -0.51
CECR3-201ENST00000428828 KBTBD12Q3ZCT8 623 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 DUPD1Q68J44 220 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 DPY19L2P1Q6NXN4 242 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 DSTYKQ6XUX3 929 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 CCDC80Q76M96 950 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 TMEM173Q86WV6 379 aaPredicted RBP11.88□□□□□ -0.51
CECR3-201ENST00000428828 FIBCD1Q8N539 461 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 LRRC52Q8N7C0 313 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 PHOSPHO2Q8TCD6 241 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 GFM2Q969S9 779 aaKnown RBP11.88□□□□□ -0.51
CECR3-201ENST00000428828 DDX27Q96GQ7 796 aaKnown RBP11.88□□□□□ -0.51
CECR3-201ENST00000428828 CATSPER2Q96P56 530 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 PHACTR1Q9C0D0 580 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 NIF3L1Q9GZT8 377 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 SMYD3Q9H7B4 428 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 FGFR1OP2Q9NVK5 253 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 LNPEPQ9UIQ6 1025 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 DNAJC12Q9UKB3 198 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 SMIM31A0A1B0GVY4 71 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 TCP11X1B4DZS4 312 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 ALDH2P05091 517 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 GALTP07902 379 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 WEE2P0C1S8 567 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 MYBL1P10243 752 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 ASPAP45381 313 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 ALDH7A1P49419 539 aaKnown RBP11.88□□□□□ -0.51
CECR3-201ENST00000428828 BPIFB4P59827 614 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 USP46P62068 366 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 AP1B1Q10567 949 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 CUL2Q13617 745 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 CHRDL2Q6WN34 429 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 EXOC3L1Q86VI1 746 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 PPFIBP2Q8ND30 876 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 RAD9AQ99638 391 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 DDX23Q9BUQ8 820 aaKnown RBP11.88□□□□□ -0.51
CECR3-201ENST00000428828 TBCCD1Q9NVR7 557 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.88□□□□□ -0.51
CECR3-201ENST00000428828 ZNF212Q9UDV6 495 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 ATP8A1Q9Y2Q0 1164 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 SH3GLB1Q9Y371 365 aa11.88□□□□□ -0.51
CECR3-201ENST00000428828 LAMA3Q16787 3333 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 KRIT1O00522 736 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 TADA2AO75478 443 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 DCTN3O75935 186 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms