RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 PPM1KQ8N3J5 372 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 UBA3Q8TBC4 463 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 NDRG1Q92597 394 aaKnown RBP19.33■□□□□ 0.68
PSPC1-202ENST00000427943 BHMTQ93088 406 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 BBS2Q9BXC9 721 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 ULBP1Q9BZM6 244 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 ARRDC1-AS1Q9H2J1 176 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 DNAJC17Q9NVM6 304 aaKnown RBP19.33■□□□□ 0.68
PSPC1-202ENST00000427943 DLL3Q9NYJ7 618 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 CLIC5Q9NZA1 410 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 DEC1Q9P2X7 70 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 HESX1Q9UBX0 185 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 EBF1Q9UH73 591 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 INVSQ9Y283 1065 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 TNRC6BQ9UPQ9 1833 aaKnown RBP19.32■□□□□ 0.68
PSPC1-202ENST00000427943 DNAH14Q0VDD8 3507 aa19.32■□□□□ 0.68
PSPC1-202ENST00000427943 TBC1D3BA6NDS4 549 aa19.32■□□□□ 0.68
PSPC1-202ENST00000427943 XPO1O14980 1071 aaKnown RBP19.32■□□□□ 0.68
PSPC1-202ENST00000427943 TYRP14679 529 aa19.32■□□□□ 0.68
PSPC1-202ENST00000427943 TNFRSF4P43489 277 aa19.32■□□□□ 0.68
PSPC1-202ENST00000427943 YWHAGP61981 247 aaKnown RBP eCLIP19.32■□□□□ 0.68
PSPC1-202ENST00000427943 ADIGQ0VDE8 80 aa19.32■□□□□ 0.68
PSPC1-202ENST00000427943 CAMK4Q16566 473 aa19.32■□□□□ 0.68
PSPC1-202ENST00000427943 C10orf76Q5T2E6 689 aa19.32■□□□□ 0.68
PSPC1-202ENST00000427943 TMEM270Q6UE05 265 aa19.32■□□□□ 0.68
PSPC1-202ENST00000427943 Q6ZNB5 142 aa19.32■□□□□ 0.68
PSPC1-202ENST00000427943 PRR23CQ6ZRP0 262 aa19.32■□□□□ 0.68
PSPC1-202ENST00000427943 ARHGEF19Q8IW93 802 aa19.32■□□□□ 0.68
PSPC1-202ENST00000427943 TERB1Q8NA31 727 aa19.32■□□□□ 0.68
PSPC1-202ENST00000427943 MDGA1Q8NFP4 955 aa19.32■□□□□ 0.68
PSPC1-202ENST00000427943 UBXN6Q9BZV1 441 aa19.32■□□□□ 0.68
PSPC1-202ENST00000427943 CDV3Q9UKY7 258 aaKnown RBP19.32■□□□□ 0.68
PSPC1-202ENST00000427943 PCDHB4Q9Y5E5 795 aa19.32■□□□□ 0.68
PSPC1-202ENST00000427943 PRR5-ARHGAP8B1AHC4 643 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 O00370 1275 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 EPN2O95208 641 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 ZBED1O96006 694 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 CALCAP01258 141 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 VDRP11473 427 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 UBE2HP62256 183 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 ARHGAP8P85298 464 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 CSRP2Q16527 193 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 PLK5Q496M5 336 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 GRAMD4Q6IC98 578 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 FOXR2Q6PJQ5 311 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 RSRC2Q7L4I2 434 aaKnown RBP19.31■□□□□ 0.68
PSPC1-202ENST00000427943 RRAGAQ7L523 313 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 BHLHA9Q7RTU4 235 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 RASSF3Q86WH2 238 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 TRIM59Q8IWR1 403 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 ARHGAP18Q8N392 663 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 ZNF276Q8N554 614 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 ZNF513Q8N8E2 541 aaPredicted RBP19.31■□□□□ 0.68
PSPC1-202ENST00000427943 LMO3Q8TAP4 145 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 TFAP2BQ92481 460 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 CDK5RAP1Q96SZ6 601 aaKnown RBP19.31■□□□□ 0.68
PSPC1-202ENST00000427943 SRRTQ9BXP5 876 aaKnown RBP19.31■□□□□ 0.68
PSPC1-202ENST00000427943 DUSP15Q9H1R2 295 aaPredicted RBP19.31■□□□□ 0.68
PSPC1-202ENST00000427943 LRRC4Q9HBW1 653 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 PLK2Q9NYY3 685 aa19.31■□□□□ 0.68
PSPC1-202ENST00000427943 A0A0A0MRY4 1105 aa19.3■□□□□ 0.68
PSPC1-202ENST00000427943 RNF225M0QZC1 329 aaPredicted RBP19.3■□□□□ 0.68
PSPC1-202ENST00000427943 PMM2O15305 246 aa19.3■□□□□ 0.68
PSPC1-202ENST00000427943 CACNG3O60359 315 aa19.3■□□□□ 0.68
PSPC1-202ENST00000427943 ADAM23O75077 832 aa19.3■□□□□ 0.68
PSPC1-202ENST00000427943 KLKB1P03952 638 aa19.3■□□□□ 0.68
PSPC1-202ENST00000427943 BRD2P25440 801 aaKnown RBP19.3■□□□□ 0.68
PSPC1-202ENST00000427943 CORO1AP31146 461 aaKnown RBP19.3■□□□□ 0.68
PSPC1-202ENST00000427943 GBP1P32455 592 aa19.3■□□□□ 0.68
PSPC1-202ENST00000427943 CETN1Q12798 172 aa19.3■□□□□ 0.68
PSPC1-202ENST00000427943 KCNH2Q12809 1159 aa19.3■□□□□ 0.68
PSPC1-202ENST00000427943 EOGTQ5NDL2 527 aa19.3■□□□□ 0.68
PSPC1-202ENST00000427943 TOGARAM2Q6ZUX3 1019 aa19.3■□□□□ 0.68
PSPC1-202ENST00000427943 P2RY11Q96G91 374 aa19.3■□□□□ 0.68
PSPC1-202ENST00000427943 ZC3H10Q96K80 434 aaKnown RBP19.3■□□□□ 0.68
PSPC1-202ENST00000427943 CNOT6LQ96LI5 555 aaKnown RBP19.3■□□□□ 0.68
PSPC1-202ENST00000427943 XPO6Q96QU8 1125 aaKnown RBP19.3■□□□□ 0.68
PSPC1-202ENST00000427943 SMOC1Q9H4F8 434 aa19.3■□□□□ 0.68
PSPC1-202ENST00000427943 CHMP5Q9NZZ3 219 aa19.3■□□□□ 0.68
PSPC1-202ENST00000427943 MARK1Q9P0L2 795 aa19.3■□□□□ 0.68
PSPC1-202ENST00000427943 MARCH2Q9P0N8 246 aa19.3■□□□□ 0.68
PSPC1-202ENST00000427943 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.29■□□□□ 0.68
PSPC1-202ENST00000427943 SLC12A8A0AV02 714 aa19.29■□□□□ 0.68
PSPC1-202ENST00000427943 P4HA2O15460 535 aa19.29■□□□□ 0.68
PSPC1-202ENST00000427943 GDF9O60383 454 aa19.29■□□□□ 0.68
PSPC1-202ENST00000427943 SETSIPP0DME0 302 aa19.29■□□□□ 0.68
PSPC1-202ENST00000427943 WASP42768 502 aa19.29■□□□□ 0.68
PSPC1-202ENST00000427943 RGS7P49802 495 aa19.29■□□□□ 0.68
PSPC1-202ENST00000427943 ATXN1P54253 815 aaKnown RBP19.29■□□□□ 0.68
PSPC1-202ENST00000427943 COG7P83436 770 aa19.29■□□□□ 0.68
PSPC1-202ENST00000427943 SF3A2Q15428 464 aaKnown RBP19.29■□□□□ 0.68
PSPC1-202ENST00000427943 ELF2Q15723 593 aa19.29■□□□□ 0.68
PSPC1-202ENST00000427943 HSF5Q4G112 596 aaPredicted RBP19.29■□□□□ 0.68
PSPC1-202ENST00000427943 PREPLQ4J6C6 727 aaPredicted RBP19.29■□□□□ 0.68
PSPC1-202ENST00000427943 EGFLAMQ63HQ2 1017 aa19.29■□□□□ 0.68
PSPC1-202ENST00000427943 PM20D1Q6GTS8 502 aa19.29■□□□□ 0.68
PSPC1-202ENST00000427943 TRIML1Q8N9V2 468 aa19.29■□□□□ 0.68
PSPC1-202ENST00000427943 RBBP8NLQ8NC74 664 aaPredicted RBP19.29■□□□□ 0.68
PSPC1-202ENST00000427943 LOXL4Q96JB6 756 aa19.29■□□□□ 0.68
PSPC1-202ENST00000427943 IPO9Q96P70 1041 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms