RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 NTSR1P30989 418 aa13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 GTF2H1P32780 548 aa13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 PSMC2P35998 433 aaKnown RBP13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 WASP42768 502 aa13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 NOVA1P51513 510 aaKnown RBP13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 ST3GAL2Q16842 350 aa13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 PPP1R26Q5T8A7 1209 aaPredicted RBP13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 DAB2IPQ5VWQ8 1189 aa13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 PEAR1Q5VY43 1037 aaPredicted RBP13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 TOGARAM2Q6ZUX3 1019 aa13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 ARMCX6Q7L4S7 300 aa13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 CCDC186Q7Z3E2 898 aa13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 SYT12Q8IV01 421 aa13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 ZNF276Q8N554 614 aa13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 CCDC47Q96A33 483 aaKnown RBP13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 BBS2Q9BXC9 721 aa13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 DUSP16Q9BY84 665 aa13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 MMRN2Q9H8L6 949 aa13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 TMEM9BQ9NQ34 198 aa13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 CALCOCO1Q9P1Z2 691 aa13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 WDR35Q9P2L0 1181 aa13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 DNMT3LQ9UJW3 386 aa13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 FBXO10Q9UK96 956 aa13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 CIZ1Q9ULV3 898 aaPredicted RBP13.75□□□□□ -0.21
DEPDC7-203ENST00000427755 MAP3K13O43283 966 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 STC2O76061 302 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 ZNF202O95125 648 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 KLKB1P03952 638 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 HOXB2P14652 356 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 TRIM21P19474 475 aaKnown RBP13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 RPL13P26373 211 aaKnown RBP13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 PLA2G4AP47712 749 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 GOLGA8FQ08AF8 430 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 GOLGA8DPQ0D2H9 430 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 BYSLQ13895 437 aaKnown RBP13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 EDRF1Q3B7T1 1238 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 ZNF394Q53GI3 561 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 TRIM61Q5EBN2 209 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 C10orf120Q5SQS8 335 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 SH3PXD2AQ5TCZ1 1133 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 KRT39Q6A163 491 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 KIAA1211LQ6NV74 962 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 NUDT18Q6ZVK8 323 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 ABCA7Q8IZY2 2146 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 PGBD3Q8N328 593 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 EEF2KMTQ96G04 330 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 FAXDC2Q96IV6 333 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 XPO6Q96QU8 1125 aaKnown RBP13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 GABRG3Q99928 467 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 CLIC5Q9NZA1 410 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 NAGPAQ9UK23 515 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 LSM7Q9UK45 103 aaKnown RBP13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 PILRBQ9UKJ0 227 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 WASF3Q9UPY6 502 aa13.74□□□□□ -0.21
DEPDC7-203ENST00000427755 RALGAPA1Q6GYQ0 2036 aa13.73□□□□□ -0.21
DEPDC7-203ENST00000427755 ATXN2Q99700 1313 aaKnown RBP13.73□□□□□ -0.21
DEPDC7-203ENST00000427755 ZFHX4Q86UP3 3567 aa13.73□□□□□ -0.21
DEPDC7-203ENST00000427755 NDUFV2P19404 249 aa13.73□□□□□ -0.21
DEPDC7-203ENST00000427755 CSRP1P21291 193 aaKnown RBP13.73□□□□□ -0.21
DEPDC7-203ENST00000427755 ITPKAP23677 461 aa13.73□□□□□ -0.21
DEPDC7-203ENST00000427755 RAD23BP54727 409 aa13.73□□□□□ -0.21
DEPDC7-203ENST00000427755 LYSMD4Q5XG99 296 aa13.73□□□□□ -0.21
DEPDC7-203ENST00000427755 SMYD4Q8IYR2 804 aaPredicted RBP13.73□□□□□ -0.21
DEPDC7-203ENST00000427755 SLC4A11Q8NBS3 891 aa13.73□□□□□ -0.21
DEPDC7-203ENST00000427755 IPO4Q8TEX9 1081 aaKnown RBP13.73□□□□□ -0.21
DEPDC7-203ENST00000427755 ARID3AQ99856 593 aa13.73□□□□□ -0.21
DEPDC7-203ENST00000427755 SCAND2PQ9GZW5 306 aaPredicted RBP13.73□□□□□ -0.21
DEPDC7-203ENST00000427755 CISHQ9NSE2 258 aa13.73□□□□□ -0.21
DEPDC7-203ENST00000427755 PLK2Q9NYY3 685 aa13.73□□□□□ -0.21
DEPDC7-203ENST00000427755 KMT2BQ9UMN6 2715 aaPredicted RBP13.73□□□□□ -0.21
DEPDC7-203ENST00000427755 IGHV1OR15-9A0A0B4J2B8 117 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 AP5Z1O43299 807 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 PENKP01210 267 aaPredicted RBP13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 CEACAM1P13688 526 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 ENGP17813 658 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 HOXD12P35452 270 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 DGKGP49619 791 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 PSEN1P49768 467 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 MXI1P50539 228 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 RPL6Q02878 288 aaKnown RBP13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 LMAN2Q12907 356 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 RAB41Q5JT25 222 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 FYB2Q5VWT5 728 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 ARHGAP17Q68EM7 881 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 SLC23A3Q6PIS1 610 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 TADA2BQ86TJ2 420 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 CHPFQ8IZ52 775 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 CCDC150Q8NCX0 1101 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 FBXL13Q8NEE6 735 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 TATDN2Q93075 761 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 BHMTQ93088 406 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 ERLEC1Q96DZ1 483 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 TMEM176AQ96HP8 235 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 HEXIM2Q96MH2 286 aaKnown RBP13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 NUSAP1Q9BXS6 441 aaKnown RBP13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 UBXN6Q9BZV1 441 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 GDPD2Q9HCC8 539 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 RAB20Q9NX57 234 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 CACNA2D2Q9NY47 1150 aa13.72□□□□□ -0.21
DEPDC7-203ENST00000427755 RAD54BQ9Y620 910 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms