RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 STARD13Q9Y3M8 1113 aa10.6□□□□□ -0.71
GACAT3-201ENST00000426539 CNOT1A5YKK6 2376 aaKnown RBP10.6□□□□□ -0.71
GACAT3-201ENST00000426539 EPG5Q9HCE0 2579 aa10.6□□□□□ -0.71
GACAT3-201ENST00000426539 MYOFQ9NZM1 2061 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 PRRT4C9JH25 899 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 NEDD8-MDP1E9PL57 170 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 CACNG3O60359 315 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 CISD3P0C7P0 127 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 RARGP13631 454 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 CD58P19256 250 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 ACO1P21399 889 aaKnown RBP10.59□□□□□ -0.71
GACAT3-201ENST00000426539 ATP5C1P36542 298 aaKnown RBP10.59□□□□□ -0.71
GACAT3-201ENST00000426539 WASP42768 502 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 NOVA1P51513 510 aaKnown RBP10.59□□□□□ -0.71
GACAT3-201ENST00000426539 KIF11P52732 1056 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 CAMK2BQ13554 666 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 ST3GAL2Q16842 350 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 PPP1R26Q5T8A7 1209 aaPredicted RBP10.59□□□□□ -0.71
GACAT3-201ENST00000426539 GRAMD4Q6IC98 578 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 KIAA1211LQ6NV74 962 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 KRBA2Q6ZNG9 492 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 TPGS1Q6ZTW0 290 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 TOGARAM2Q6ZUX3 1019 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 INTS8Q75QN2 995 aaKnown RBP10.59□□□□□ -0.71
GACAT3-201ENST00000426539 LPCAT2Q7L5N7 544 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 FAM186BQ8IYM0 893 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 KCNV2Q8TDN2 545 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 NT5C1AQ9BXI3 368 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 NIF3L1Q9GZT8 377 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 MMRN2Q9H8L6 949 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 PNPLA8Q9NP80 782 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 DNAJC17Q9NVM6 304 aaKnown RBP10.59□□□□□ -0.71
GACAT3-201ENST00000426539 BCCIPQ9P287 314 aaKnown RBP eCLIP10.59□□□□□ -0.71
GACAT3-201ENST00000426539 EVLQ9UI08 416 aaPredicted RBP10.59□□□□□ -0.71
GACAT3-201ENST00000426539 WASF3Q9UPY6 502 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 PCDHA5Q9Y5H7 936 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 USP3Q9Y6I4 520 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 CACNA1BQ00975 2339 aa10.59□□□□□ -0.71
GACAT3-201ENST00000426539 ATXN2Q99700 1313 aaKnown RBP10.58□□□□□ -0.71
GACAT3-201ENST00000426539 STC2O76061 302 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 KLKB1P03952 638 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 TYRP14679 529 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 NTSR1P30989 418 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 KRT85P78386 507 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 ENPEPQ07075 957 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 ZNF394Q53GI3 561 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 TRIM61Q5EBN2 209 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 SH3PXD2AQ5TCZ1 1133 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 PEAR1Q5VY43 1037 aaPredicted RBP10.58□□□□□ -0.72
GACAT3-201ENST00000426539 KLHDC10Q6PID8 442 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 CCDC186Q7Z3E2 898 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 PGBD3Q8N328 593 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 GUF1Q8N442 669 aaKnown RBP10.58□□□□□ -0.72
GACAT3-201ENST00000426539 DEFB119Q8N690 84 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 ERLEC1Q96DZ1 483 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 EEF2KMTQ96G04 330 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 SPACA7Q96KW9 195 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 ARID3AQ99856 593 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 BBS2Q9BXC9 721 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 DUSP16Q9BY84 665 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 TMEM8AQ9HCN3 771 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 CD93Q9NPY3 652 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 TMEM9BQ9NQ34 198 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 FSCN3Q9NQT6 498 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 CALCOCO1Q9P1Z2 691 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 FBXO10Q9UK96 956 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 PILRBQ9UKJ0 227 aa10.58□□□□□ -0.72
GACAT3-201ENST00000426539 KMT2BQ9UMN6 2715 aaPredicted RBP10.57□□□□□ -0.72
GACAT3-201ENST00000426539 IGHV1OR15-9A0A0B4J2B8 117 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 A0A1W2PQ27 194 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 A0A1W2PQ64 194 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 A0A1W2PQD8 194 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 KIF20AO95235 890 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 TOP3BO95985 862 aaKnown RBP10.57□□□□□ -0.72
GACAT3-201ENST00000426539 KRT13P13646 458 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 HOXB2P14652 356 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 NDUFV2P19404 249 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 ITPKAP23677 461 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 GTF2H1P32780 548 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 PSMC2P35998 433 aaKnown RBP10.57□□□□□ -0.72
GACAT3-201ENST00000426539 PLA2G4AP47712 749 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 ADAM9Q13443 819 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 PREPLQ4J6C6 727 aaPredicted RBP10.57□□□□□ -0.72
GACAT3-201ENST00000426539 C10orf120Q5SQS8 335 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 DAB2IPQ5VWQ8 1189 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 LYSMD4Q5XG99 296 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 TRMT11Q7Z4G4 463 aaKnown RBP10.57□□□□□ -0.72
GACAT3-201ENST00000426539 SYT12Q8IV01 421 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 SMYD4Q8IYR2 804 aaPredicted RBP10.57□□□□□ -0.72
GACAT3-201ENST00000426539 ZNF276Q8N554 614 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 SLC4A11Q8NBS3 891 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 IPO4Q8TEX9 1081 aaKnown RBP10.57□□□□□ -0.72
GACAT3-201ENST00000426539 BHMTQ93088 406 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 GABRG3Q99928 467 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 IMPG2Q9BZV3 1241 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 SLC6A17Q9H1V8 727 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 PLK2Q9NYY3 685 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 WDR35Q9P2L0 1181 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 DNMT3LQ9UJW3 386 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 NAGPAQ9UK23 515 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms