RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 PSMD6Q15008 389 aa15.48■□□□□ 0.07
PDAP1-202ENST00000426447 SUZ12Q15022 739 aaKnown RBP15.48■□□□□ 0.07
PDAP1-202ENST00000426447 HLA-BQ31612 363 aa15.48■□□□□ 0.07
PDAP1-202ENST00000426447 FUT11Q495W5 492 aa15.48■□□□□ 0.07
PDAP1-202ENST00000426447 PAQR9Q6ZVX9 377 aa15.48■□□□□ 0.07
PDAP1-202ENST00000426447 METTL3Q86U44 580 aaKnown RBP15.48■□□□□ 0.07
PDAP1-202ENST00000426447 PDILTQ8N807 584 aa15.48■□□□□ 0.07
PDAP1-202ENST00000426447 GLIS3Q8NEA6 775 aa15.48■□□□□ 0.07
PDAP1-202ENST00000426447 BBC3Q96PG8 261 aaPredicted RBP15.48■□□□□ 0.07
PDAP1-202ENST00000426447 LRRC27Q9C0I9 530 aa15.48■□□□□ 0.07
PDAP1-202ENST00000426447 KRT82Q9NSB4 513 aa15.48■□□□□ 0.07
PDAP1-202ENST00000426447 NFE2L3Q9Y4A8 694 aa15.48■□□□□ 0.07
PDAP1-202ENST00000426447 CEP192Q8TEP8 1941 aa15.48■□□□□ 0.07
PDAP1-202ENST00000426447 FAM92AA1XBS5 289 aa15.47■□□□□ 0.07
PDAP1-202ENST00000426447 TRABD2BA6NFA1 517 aa15.47■□□□□ 0.07
PDAP1-202ENST00000426447 METTL12A8MUP2 240 aa15.47■□□□□ 0.07
PDAP1-202ENST00000426447 CLIC2O15247 247 aa15.47■□□□□ 0.07
PDAP1-202ENST00000426447 GREM1O60565 184 aa15.47■□□□□ 0.07
PDAP1-202ENST00000426447 ZIC2O95409 532 aaPredicted RBP15.47■□□□□ 0.07
PDAP1-202ENST00000426447 STAU1O95793 577 aaKnown RBP15.47■□□□□ 0.07
PDAP1-202ENST00000426447 CISD3P0C7P0 127 aa15.47■□□□□ 0.07
PDAP1-202ENST00000426447 ATXN1LP0C7T5 689 aaKnown RBP15.47■□□□□ 0.07
PDAP1-202ENST00000426447 ZNF883P0CG24 379 aa15.47■□□□□ 0.07
PDAP1-202ENST00000426447 PGFP49763 221 aa15.47■□□□□ 0.07
PDAP1-202ENST00000426447 MAP3K7CLP57077 242 aa15.47■□□□□ 0.07
PDAP1-202ENST00000426447 CYP24A1Q07973 514 aa15.47■□□□□ 0.07
PDAP1-202ENST00000426447 BIRC3Q13489 604 aa15.47■□□□□ 0.07
PDAP1-202ENST00000426447 ACOT1Q86TX2 421 aa15.47■□□□□ 0.07
PDAP1-202ENST00000426447 TMPRSS6Q8IU80 811 aa15.47■□□□□ 0.07
PDAP1-202ENST00000426447 GALNT15Q8N3T1 639 aa15.47■□□□□ 0.07
PDAP1-202ENST00000426447 XXYLT1Q8NBI6 393 aa15.47■□□□□ 0.07
PDAP1-202ENST00000426447 UCMAQ8WVF2 138 aa15.47■□□□□ 0.07
PDAP1-202ENST00000426447 ZNF516Q92618 1163 aa15.47■□□□□ 0.07
PDAP1-202ENST00000426447 PRCCQ92733 491 aaPredicted RBP15.47■□□□□ 0.07
PDAP1-202ENST00000426447 SIPA1Q96FS4 1042 aa15.47■□□□□ 0.07
PDAP1-202ENST00000426447 TRIM9Q9C026 710 aa15.47■□□□□ 0.07
PDAP1-202ENST00000426447 SMYD3Q9H7B4 428 aa15.47■□□□□ 0.07
PDAP1-202ENST00000426447 AGPAT3Q9NRZ7 376 aa15.47■□□□□ 0.07
PDAP1-202ENST00000426447 EIF2B4Q9UI10 523 aaKnown RBP15.47■□□□□ 0.07
PDAP1-202ENST00000426447 NBEAQ8NFP9 2946 aa15.46■□□□□ 0.07
PDAP1-202ENST00000426447 FLRT2O43155 660 aa15.46■□□□□ 0.07
PDAP1-202ENST00000426447 HOXD13P35453 343 aa15.46■□□□□ 0.07
PDAP1-202ENST00000426447 PLA2G4AP47712 749 aa15.46■□□□□ 0.07
PDAP1-202ENST00000426447 TPMTP51580 245 aa15.46■□□□□ 0.07
PDAP1-202ENST00000426447 ZNF132P52740 706 aa15.46■□□□□ 0.07
PDAP1-202ENST00000426447 CCDC157Q569K6 752 aa15.46■□□□□ 0.07
PDAP1-202ENST00000426447 ZNF667Q5HYK9 610 aa15.46■□□□□ 0.07
PDAP1-202ENST00000426447 MARCH9Q86YJ5 346 aa15.46■□□□□ 0.07
PDAP1-202ENST00000426447 FUKQ8N0W3 1084 aa15.46■□□□□ 0.07
PDAP1-202ENST00000426447 SNX19Q92543 992 aa15.46■□□□□ 0.07
PDAP1-202ENST00000426447 COL26A1Q96A83 441 aa15.46■□□□□ 0.07
PDAP1-202ENST00000426447 SMOQ99835 787 aa15.46■□□□□ 0.07
PDAP1-202ENST00000426447 NUP58Q9BVL2 599 aa15.46■□□□□ 0.07
PDAP1-202ENST00000426447 MKRN2Q9H000 416 aaKnown RBP15.46■□□□□ 0.07
PDAP1-202ENST00000426447 XYLT2Q9H1B5 865 aa15.46■□□□□ 0.07
PDAP1-202ENST00000426447 USP36Q9P275 1121 aaKnown RBP15.46■□□□□ 0.07
PDAP1-202ENST00000426447 DKK4Q9UBT3 224 aa15.46■□□□□ 0.07
PDAP1-202ENST00000426447 FNDC3AQ9Y2H6 1198 aaKnown RBP15.46■□□□□ 0.07
PDAP1-202ENST00000426447 MYO18AQ92614 2054 aaKnown RBP15.45■□□□□ 0.06
PDAP1-202ENST00000426447 A0A1B0GVT2 93 aa15.45■□□□□ 0.06
PDAP1-202ENST00000426447 KCNJ18B7U540 433 aa15.45■□□□□ 0.06
PDAP1-202ENST00000426447 NPC1O15118 1278 aa15.45■□□□□ 0.06
PDAP1-202ENST00000426447 EIF3DO15371 548 aaKnown RBP eCLIP15.45■□□□□ 0.06
PDAP1-202ENST00000426447 BEST1O76090 585 aa15.45■□□□□ 0.06
PDAP1-202ENST00000426447 CCDC130P13994 396 aa15.45■□□□□ 0.06
PDAP1-202ENST00000426447 ZNF699Q32M78 642 aa15.45■□□□□ 0.06
PDAP1-202ENST00000426447 SCARA5Q6ZMJ2 495 aa15.45■□□□□ 0.06
PDAP1-202ENST00000426447 NELFCDQ8IXH7 590 aa15.45■□□□□ 0.06
PDAP1-202ENST00000426447 ZNF507Q8TCN5 953 aa15.45■□□□□ 0.06
PDAP1-202ENST00000426447 SLC2A14Q8TDB8 520 aa15.45■□□□□ 0.06
PDAP1-202ENST00000426447 CYLDQ9NQC7 956 aa15.45■□□□□ 0.06
PDAP1-202ENST00000426447 DNMT3LQ9UJW3 386 aa15.45■□□□□ 0.06
PDAP1-202ENST00000426447 NUDT5Q9UKK9 219 aa15.45■□□□□ 0.06
PDAP1-202ENST00000426447 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.45■□□□□ 0.062e-7■■■□□ 18.4
PDAP1-202ENST00000426447 PCDHGB2Q9Y5G2 931 aa15.45■□□□□ 0.06
PDAP1-202ENST00000426447 A0A087X0B3 334 aa15.44■□□□□ 0.06
PDAP1-202ENST00000426447 TGFB1I1O43294 461 aa15.44■□□□□ 0.06
PDAP1-202ENST00000426447 CD2BP2O95400 341 aaKnown RBP15.44■□□□□ 0.06
PDAP1-202ENST00000426447 RARGP13631 454 aa15.44■□□□□ 0.06
PDAP1-202ENST00000426447 TRIM21P19474 475 aaKnown RBP15.44■□□□□ 0.06
PDAP1-202ENST00000426447 IL12RB1P42701 662 aa15.44■□□□□ 0.06
PDAP1-202ENST00000426447 CSNK1EP49674 416 aaKnown RBP15.44■□□□□ 0.06
PDAP1-202ENST00000426447 ASIC1P78348 528 aa15.44■□□□□ 0.06
PDAP1-202ENST00000426447 AMPD3Q01432 767 aa15.44■□□□□ 0.06
PDAP1-202ENST00000426447 C19orf57Q0VDD7 668 aa15.44■□□□□ 0.06
PDAP1-202ENST00000426447 E2F5Q15329 346 aa15.44■□□□□ 0.06
PDAP1-202ENST00000426447 C10orf120Q5SQS8 335 aa15.44■□□□□ 0.06
PDAP1-202ENST00000426447 DBX2Q6ZNG2 339 aa15.44■□□□□ 0.06
PDAP1-202ENST00000426447 FAM124AQ86V42 546 aa15.44■□□□□ 0.06
PDAP1-202ENST00000426447 CACUL1Q86Y37 369 aa15.44■□□□□ 0.06
PDAP1-202ENST00000426447 PDCD7Q8N8D1 485 aaKnown RBP15.44■□□□□ 0.06
PDAP1-202ENST00000426447 ZMIZ2Q8NF64 920 aa15.44■□□□□ 0.06
PDAP1-202ENST00000426447 ENGASEQ8NFI3 743 aa15.44■□□□□ 0.06
PDAP1-202ENST00000426447 JAKMIP2Q96AA8 810 aa15.44■□□□□ 0.06
PDAP1-202ENST00000426447 DCBLD2Q96PD2 775 aa15.44■□□□□ 0.06
PDAP1-202ENST00000426447 TOR4AQ9NXH8 423 aa15.44■□□□□ 0.06
PDAP1-202ENST00000426447 THAP10Q9P2Z0 257 aaPredicted RBP15.44■□□□□ 0.06
PDAP1-202ENST00000426447 FBXO10Q9UK96 956 aa15.44■□□□□ 0.06
PDAP1-202ENST00000426447 SCML2Q9UQR0 700 aa15.44■□□□□ 0.06
PDAP1-202ENST00000426447 LAMA5O15230 3695 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms