RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 AMPD2Q01433 879 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 ARHGAP44Q17R89 818 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 ANO4Q32M45 955 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 BSPRYQ5W0U4 402 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 KLHDC10Q6PID8 442 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 TMEM92Q6UXU6 159 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 TPGS1Q6ZTW0 290 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 DDX42Q86XP3 938 aaKnown RBP eCLIP13.37□□□□□ -0.27
GPC1-204ENST00000426280 WDTC1Q8N5D0 677 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 BHMTQ93088 406 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 PNKPQ96T60 521 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 EPC1Q9H2F5 836 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 SEMA4AQ9H3S1 761 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 PLK2Q9NYY3 685 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 TJP2Q9UDY2 1190 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 KIAA1257Q9ULG3 409 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 CLEC4EQ9ULY5 219 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 NFE2L3Q9Y4A8 694 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 KIAA1549LQ6ZVL6 1849 aa13.36□□□□□ -0.27
GPC1-204ENST00000426280 SLC12A8A0AV02 714 aa13.36□□□□□ -0.27
GPC1-204ENST00000426280 M0QYV0 167 aa13.36□□□□□ -0.27
GPC1-204ENST00000426280 LETM1O95202 739 aaPredicted RBP13.36□□□□□ -0.27
GPC1-204ENST00000426280 KAT7O95251 611 aa13.36□□□□□ -0.27
GPC1-204ENST00000426280 FGFR1OPO95684 399 aaKnown RBP13.36□□□□□ -0.27
GPC1-204ENST00000426280 CISD3P0C7P0 127 aa13.36□□□□□ -0.27
GPC1-204ENST00000426280 RALAP11233 206 aa13.36□□□□□ -0.27
GPC1-204ENST00000426280 KRT5P13647 590 aa13.36□□□□□ -0.27
GPC1-204ENST00000426280 TRIM21P19474 475 aaKnown RBP13.36□□□□□ -0.27
GPC1-204ENST00000426280 TIE1P35590 1138 aa13.36□□□□□ -0.27
GPC1-204ENST00000426280 GPD2P43304 727 aa13.36□□□□□ -0.27
GPC1-204ENST00000426280 KIR2DL1P43626 348 aaPredicted RBP13.36□□□□□ -0.27
GPC1-204ENST00000426280 DAOAP59103 153 aa13.36□□□□□ -0.27
GPC1-204ENST00000426280 GAD2Q05329 585 aa13.36□□□□□ -0.27
GPC1-204ENST00000426280 CT47A1Q5JQC4 288 aaPredicted RBP13.36□□□□□ -0.27
GPC1-204ENST00000426280 ZC3H14Q6PJT7 736 aaKnown RBP13.36□□□□□ -0.27
GPC1-204ENST00000426280 TOGARAM2Q6ZUX3 1019 aa13.36□□□□□ -0.27
GPC1-204ENST00000426280 WDR5BQ86VZ2 330 aa13.36□□□□□ -0.27
GPC1-204ENST00000426280 LONP2Q86WA8 852 aa13.36□□□□□ -0.27
GPC1-204ENST00000426280 ALLCQ8N6M5 410 aa13.36□□□□□ -0.27
GPC1-204ENST00000426280 ENOX1Q8TC92 643 aaKnown RBP13.36□□□□□ -0.27
GPC1-204ENST00000426280 ZNF606Q8WXB4 792 aa13.36□□□□□ -0.27
GPC1-204ENST00000426280 THAP9Q9H5L6 903 aa13.36□□□□□ -0.27
GPC1-204ENST00000426280 LRRC4Q9HBW1 653 aa13.36□□□□□ -0.27
GPC1-204ENST00000426280 MARCH2Q9P0N8 246 aa13.36□□□□□ -0.27
GPC1-204ENST00000426280 HESX1Q9UBX0 185 aa13.36□□□□□ -0.27
GPC1-204ENST00000426280 AGO1Q9UL18 857 aaKnown RBP13.36□□□□□ -0.27
GPC1-204ENST00000426280 SMG5Q9UPR3 1016 aaKnown RBP13.36□□□□□ -0.27
GPC1-204ENST00000426280 INVSQ9Y283 1065 aa13.36□□□□□ -0.27
GPC1-204ENST00000426280 FAM170AA1A519 330 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 PRRT4C9JH25 899 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 SGK1O00141 431 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 DCLK1O15075 740 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 HOXC11O43248 304 aaPredicted RBP13.35□□□□□ -0.27
GPC1-204ENST00000426280 MSI1O43347 362 aaKnown RBP13.35□□□□□ -0.27
GPC1-204ENST00000426280 ADAM23O75077 832 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 SETSIPP0DME0 302 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 MTIF2P46199 727 aaKnown RBP13.35□□□□□ -0.27
GPC1-204ENST00000426280 RPL34P49207 117 aaKnown RBP13.35□□□□□ -0.27
GPC1-204ENST00000426280 PSEN1P49768 467 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 CETN1Q12798 172 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 DMC1Q14565 340 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 NCAPHQ15003 741 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 FBXO43Q4G163 708 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 VWA3BQ502W6 1294 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 GBP6Q6ZN66 633 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 SYT13Q7L8C5 426 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 DENND1CQ8IV53 801 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 SCUBE3Q8IX30 993 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 KIAA2013Q8IYS2 634 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 AOPEPQ8N6M6 819 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 IL17RCQ8NAC3 791 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 OTUB2Q96DC9 234 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 ERLEC1Q96DZ1 483 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 ACOX2Q99424 681 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 FAM126AQ9BYI3 521 aaPredicted RBP13.35□□□□□ -0.27
GPC1-204ENST00000426280 MIS12Q9H081 205 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 PARD6AQ9NPB6 346 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 ARHGEF4Q9NR80 690 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 FANCLQ9NW38 375 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 DNAJC12Q9UKB3 198 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 SLC8A2Q9UPR5 921 aa13.35□□□□□ -0.27
GPC1-204ENST00000426280 NEDD8-MDP1E9PL57 170 aa13.34□□□□□ -0.27
GPC1-204ENST00000426280 FOXN3O00409 490 aaPredicted RBP13.34□□□□□ -0.27
GPC1-204ENST00000426280 KLF8O95600 359 aaPredicted RBP13.34□□□□□ -0.27
GPC1-204ENST00000426280 ADH1CP00326 375 aa13.34□□□□□ -0.27
GPC1-204ENST00000426280 TYRP14679 529 aa13.34□□□□□ -0.27
GPC1-204ENST00000426280 CORO1AP31146 461 aaKnown RBP13.34□□□□□ -0.27
GPC1-204ENST00000426280 HOXA6P31267 233 aa13.34□□□□□ -0.27
GPC1-204ENST00000426280 CLCN1P35523 988 aa13.34□□□□□ -0.27
GPC1-204ENST00000426280 WASP42768 502 aa13.34□□□□□ -0.27
GPC1-204ENST00000426280 MAN2A1Q16706 1144 aa13.34□□□□□ -0.27
GPC1-204ENST00000426280 EXOC3L4Q17RC7 722 aa13.34□□□□□ -0.27
GPC1-204ENST00000426280 BTBD8Q5XKL5 378 aa13.34□□□□□ -0.27
GPC1-204ENST00000426280 PRR23BQ6ZRT6 265 aa13.34□□□□□ -0.27
GPC1-204ENST00000426280 FMNL3Q8IVF7 1028 aa13.34□□□□□ -0.27
GPC1-204ENST00000426280 FRMD1Q8N878 549 aa13.34□□□□□ -0.27
GPC1-204ENST00000426280 TXNDC5Q8NBS9 432 aaKnown RBP13.34□□□□□ -0.27
GPC1-204ENST00000426280 SHC3Q92529 594 aa13.34□□□□□ -0.27
GPC1-204ENST00000426280 PIWIL1Q96J94 861 aaKnown RBP13.34□□□□□ -0.27
GPC1-204ENST00000426280 TUBGCP2Q9BSJ2 902 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms