RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 J3KRW8 73 aa6.94□□□□□ -1.3
SSBP3-207ENST00000426150 EYA2O00167 538 aa6.94□□□□□ -1.3
SSBP3-207ENST00000426150 CD3EAPO15446 510 aaKnown RBP6.94□□□□□ -1.3
SSBP3-207ENST00000426150 EPB41L2O43491 1005 aaKnown RBP6.94□□□□□ -1.3
SSBP3-207ENST00000426150 DNPH1O43598 174 aa6.94□□□□□ -1.3
SSBP3-207ENST00000426150 GPANK1O95872 356 aa6.94□□□□□ -1.3
SSBP3-207ENST00000426150 SRGAP2BP0DMP2 458 aa6.94□□□□□ -1.3
SSBP3-207ENST00000426150 ADD2P35612 726 aa6.94□□□□□ -1.3
SSBP3-207ENST00000426150 ALDH18A1P54886 795 aaKnown RBP6.94□□□□□ -1.3
SSBP3-207ENST00000426150 AP2B1P63010 937 aa6.94□□□□□ -1.3
SSBP3-207ENST00000426150 GPS1Q13098 491 aa6.94□□□□□ -1.3
SSBP3-207ENST00000426150 CNGB1Q14028 1251 aaPredicted RBP6.94□□□□□ -1.3
SSBP3-207ENST00000426150 ABLIM2Q6H8Q1 611 aa6.94□□□□□ -1.3
SSBP3-207ENST00000426150 FOXR2Q6PJQ5 311 aa6.94□□□□□ -1.3
SSBP3-207ENST00000426150 SPOCD1Q6ZMY3 1216 aa6.94□□□□□ -1.3
SSBP3-207ENST00000426150 CLNKQ7Z7G1 428 aa6.94□□□□□ -1.3
SSBP3-207ENST00000426150 SGMS1Q86VZ5 419 aa6.94□□□□□ -1.3
SSBP3-207ENST00000426150 RASGRP3Q8IV61 690 aa6.94□□□□□ -1.3
SSBP3-207ENST00000426150 CCDC117Q8IWD4 279 aaPredicted RBP6.94□□□□□ -1.3
SSBP3-207ENST00000426150 SPARTQ8N0X7 666 aa6.94□□□□□ -1.3
SSBP3-207ENST00000426150 PPHLN1Q8NEY8 458 aaKnown RBP6.94□□□□□ -1.3
SSBP3-207ENST00000426150 PYM1Q9BRP8 204 aaKnown RBP6.94□□□□□ -1.3
SSBP3-207ENST00000426150 RTKNQ9BST9 563 aa6.94□□□□□ -1.3
SSBP3-207ENST00000426150 DDX23Q9BUQ8 820 aaKnown RBP6.94□□□□□ -1.3
SSBP3-207ENST00000426150 GPR87Q9BY21 358 aa6.94□□□□□ -1.3
SSBP3-207ENST00000426150 EPS8L2Q9H6S3 715 aa6.94□□□□□ -1.3
SSBP3-207ENST00000426150 NDRG4Q9ULP0 352 aaKnown RBP6.94□□□□□ -1.3
SSBP3-207ENST00000426150 RGPD5Q99666 1765 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 DIRC3C9JPN6 131 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 CCNT2O60583 730 aaKnown RBP6.93□□□□□ -1.3
SSBP3-207ENST00000426150 VIPP01282 170 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 PPIFP30405 207 aaKnown RBP6.93□□□□□ -1.3
SSBP3-207ENST00000426150 NDUFV1P49821 464 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 DDX10Q13206 875 aaKnown RBP6.93□□□□□ -1.3
SSBP3-207ENST00000426150 ATP1A4Q13733 1029 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 ZNF124Q15973 351 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 FAM110CQ1W6H9 321 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 TBC1D10BQ4KMP7 808 aaPredicted RBP6.93□□□□□ -1.3
SSBP3-207ENST00000426150 PDCD4Q53EL6 469 aaKnown RBP6.93□□□□□ -1.3
SSBP3-207ENST00000426150 ARHGAP40Q5TG30 622 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 WDR78Q5VTH9 848 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 RGS7BPQ6MZT1 257 aaPredicted RBP6.93□□□□□ -1.3
SSBP3-207ENST00000426150 Q6ZRM9 215 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 LRRTM4Q86VH4 590 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 MAPKAPK5Q8IW41 473 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.93□□□□□ -1.3
SSBP3-207ENST00000426150 SIMC1Q8NDZ2 872 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 SCAMP5Q8TAC9 235 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 ASB12Q8WXK4 309 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 RSC1A1Q92681 617 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 GRAMD1AQ96CP6 724 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 ZNF668Q96K58 619 aaPredicted RBP6.93□□□□□ -1.3
SSBP3-207ENST00000426150 DCLRE1CQ96SD1 692 aaKnown RBP6.93□□□□□ -1.3
SSBP3-207ENST00000426150 GBA2Q9HCG7 927 aaPredicted RBP6.93□□□□□ -1.3
SSBP3-207ENST00000426150 MAP3K20Q9NYL2 800 aaKnown RBP6.93□□□□□ -1.3
SSBP3-207ENST00000426150 GGA3Q9NZ52 723 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 RNF181Q9P0P0 153 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 DNAJB11Q9UBS4 358 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 FEM1BQ9UK73 627 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 CHST2Q9Y4C5 530 aa6.93□□□□□ -1.3
SSBP3-207ENST00000426150 CPSF1Q10570 1443 aaKnown RBP6.93□□□□□ -1.3
SSBP3-207ENST00000426150 PRAMEF33A0A0G2JMD5 474 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 A0A1W2PS29 197 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 GPR42O15529 346 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 PRAMEF10O60809 474 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 ERN1O75460 977 aaKnown RBP6.92□□□□□ -1.3
SSBP3-207ENST00000426150 POLBP06746 335 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 CSF1RP07333 972 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 ANXA6P08133 673 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 HGFP14210 728 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 CNTFP26441 200 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 PRKAA2P54646 552 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 BCAT1P54687 386 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 GEMIN4P57678 1058 aaKnown RBP6.92□□□□□ -1.3
SSBP3-207ENST00000426150 SCAPQ12770 1279 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 DYRK1AQ13627 763 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 EFR3AQ14156 821 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 ANKRD45Q5TZF3 282 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 LRRC55Q6ZSA7 311 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 ARHGEF25Q86VW2 580 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 CIR1Q86X95 450 aaPredicted RBP6.92□□□□□ -1.3
SSBP3-207ENST00000426150 C2CD5Q86YS7 1000 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 HERC6Q8IVU3 1022 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 ZNF808Q8N4W9 903 aaPredicted RBP6.92□□□□□ -1.3
SSBP3-207ENST00000426150 KCNH5Q8NCM2 988 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 THAP4Q8WY91 577 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 SKA1Q96BD8 255 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 ZDHHC12Q96GR4 267 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 TEX101Q9BY14 249 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 RIC8AQ9NPQ8 531 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 EIF2B4Q9UI10 523 aaKnown RBP6.92□□□□□ -1.3
SSBP3-207ENST00000426150 VPS51Q9UID3 782 aa6.92□□□□□ -1.3
SSBP3-207ENST00000426150 TRPM1Q7Z4N2 1603 aa6.91□□□□□ -1.3
SSBP3-207ENST00000426150 COL18A1P39060 1754 aa6.91□□□□□ -1.3
SSBP3-207ENST00000426150 J3KTA2 159 aa6.91□□□□□ -1.3
SSBP3-207ENST00000426150 FOXN1O15353 648 aa6.91□□□□□ -1.3
SSBP3-207ENST00000426150 ZFPL1O95159 310 aa6.91□□□□□ -1.3
SSBP3-207ENST00000426150 PLATP00750 562 aa6.91□□□□□ -1.3
SSBP3-207ENST00000426150 HLA-DOAP06340 250 aa6.91□□□□□ -1.3
SSBP3-207ENST00000426150 ELANEP08246 267 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms