RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 CACNA2D1P54289 1103 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 TEAD4Q15561 434 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SCARA5Q6ZMJ2 495 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 RSRC2Q7L4I2 434 aaKnown RBP12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 NAXDQ8IW45 347 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SFTPA1Q8IWL2 248 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 ADAMTS14Q8WXS8 1223 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CYFIP2Q96F07 1278 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 MRGPRX1Q96LB2 322 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 NT5C1AQ9BXI3 368 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 TMEM121BQ9BXQ6 578 aaPredicted RBP12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 XYLT2Q9H1B5 865 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SMYD3Q9H7B4 428 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CYP3A43Q9HB55 503 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CYLDQ9NQC7 956 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 EXOC1Q9NV70 894 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 NAGPAQ9UK23 515 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CFAP45Q9UL16 551 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 KIF26AQ9ULI4 1882 aaPredicted RBP12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 PLA2G4CQ9UP65 541 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 STON1Q9Y6Q2 735 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 KMT2BQ9UMN6 2715 aaPredicted RBP12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 TSC2P49815 1807 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 A0A087X0B3 334 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 ANTXRLA6NF34 631 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 C4BPAP04003 597 aaKnown RBP12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 KRT13P13646 458 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 PIK3CAP42336 1068 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 AFMP43652 599 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 ME1P48163 572 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 NDST1P52848 882 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 MESP2Q0VG99 397 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 RAB44Q7Z6P3 723 aaPredicted RBP12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 PROSER1Q86XN7 944 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SLC41A1Q8IVJ1 513 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 FUKQ8N0W3 1084 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 GALNT15Q8N3T1 639 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 ZNF276Q8N554 614 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 GLIS3Q8NEA6 775 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 TMC2Q8TDI7 906 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 RHBDD1Q8TEB9 315 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SKA1Q96BD8 255 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 TOE1Q96GM8 510 aaKnown RBP12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 ZFRQ96KR1 1074 aaKnown RBP12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 HNRNPABQ99729 332 aaKnown RBP12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SMOQ99835 787 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 GPR174Q9BXC1 333 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SLC2A11Q9BYW1 496 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 FSCN3Q9NQT6 498 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CACNA2D2Q9NY47 1150 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 KIAA1522Q9P206 1035 aaPredicted RBP12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 DNAH14Q0VDD8 3507 aa12.91□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SPAG17Q6Q759 2223 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 PRRT4C9JH25 899 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 BCAT2O15382 392 aaPredicted RBP12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 TBX18O95935 607 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 FTH1P19P0C7X4 201 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CCDC130P13994 396 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 RPL13P26373 211 aaKnown RBP12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 HOXD13P35453 343 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SCAPQ12770 1279 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 EIF4HQ15056 248 aaKnown RBP12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 E2F4Q16254 413 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 INAVAQ3KP66 663 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CEP135Q66GS9 1140 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 ATL3Q6DD88 541 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 PAQR9Q6ZVX9 377 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 MIB1Q86YT6 1006 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 TMPRSS6Q8IU80 811 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SLC9A9Q8IVB4 645 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 DDI1Q8WTU0 396 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 DNASE2BQ8WZ79 361 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 BHMTQ93088 406 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 JAKMIP2Q96AA8 810 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 ACOX2Q99424 681 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 PCED1AQ9H1Q7 454 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 BLZF1Q9H2G9 400 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 GAREM1Q9H706 876 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 FAM49BQ9NUQ9 324 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 WSB2Q9NYS7 404 aaPredicted RBP12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CLIC5Q9NZA1 410 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 MTMR6Q9Y217 621 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SLC27A6Q9Y2P4 619 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 RAD54BQ9Y620 910 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 ATG2BQ96BY7 2078 aa12.9□□□□□ -0.34
HLA-DQB3-203ENST00000425319 THADAQ6YHU6 1953 aa12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 LRRIQ3A6PVS8 624 aaPredicted RBP12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 METTL12A8MUP2 240 aa12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 PDXKO00764 312 aa12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 FLRT2O43155 660 aa12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 ZNF883P0CG24 379 aa12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 MAOBP27338 520 aa12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 HARS2P49590 506 aaKnown RBP12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 ZNF445P59923 1031 aa12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 CLDN10P78369 228 aa12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 KMT5BQ4FZB7 885 aa12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 DCAF12L1Q5VU92 463 aa12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 SERPINA13PQ6UXR4 307 aa12.89□□□□□ -0.35
HLA-DQB3-203ENST00000425319 TOGARAM2Q6ZUX3 1019 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms