RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 CCDC150Q8NCX0 1101 aa13.69□□□□□ -0.22
VRK3-203ENST00000424804 TAF4BQ92750 862 aa13.69□□□□□ -0.22
VRK3-203ENST00000424804 DHTKD1Q96HY7 919 aaPredicted RBP13.69□□□□□ -0.22
VRK3-203ENST00000424804 HNRNPABQ99729 332 aaKnown RBP13.69□□□□□ -0.22
VRK3-203ENST00000424804 EDEM2Q9BV94 578 aa13.69□□□□□ -0.22
VRK3-203ENST00000424804 CYLDQ9NQC7 956 aa13.69□□□□□ -0.22
VRK3-203ENST00000424804 FAM49BQ9NUQ9 324 aa13.69□□□□□ -0.22
VRK3-203ENST00000424804 SCML2Q9UQR0 700 aa13.69□□□□□ -0.22
VRK3-203ENST00000424804 STARD13Q9Y3M8 1113 aa13.69□□□□□ -0.22
VRK3-203ENST00000424804 ADAMTS9Q9P2N4 1935 aa13.68□□□□□ -0.22
VRK3-203ENST00000424804 TLR5O60602 858 aa13.68□□□□□ -0.22
VRK3-203ENST00000424804 BMP6P22004 513 aa13.68□□□□□ -0.22
VRK3-203ENST00000424804 PPP1R2P41236 205 aa13.68□□□□□ -0.22
VRK3-203ENST00000424804 PTGER3P43115 390 aa13.68□□□□□ -0.22
VRK3-203ENST00000424804 MXI1P50539 228 aa13.68□□□□□ -0.22
VRK3-203ENST00000424804 PEAR1Q5VY43 1037 aaPredicted RBP13.68□□□□□ -0.22
VRK3-203ENST00000424804 Q6ZNB5 142 aa13.68□□□□□ -0.22
VRK3-203ENST00000424804 C11orf74Q86VG3 221 aa13.68□□□□□ -0.22
VRK3-203ENST00000424804 CREBRFQ8IUR6 639 aa13.68□□□□□ -0.22
VRK3-203ENST00000424804 TERB1Q8NA31 727 aa13.68□□□□□ -0.22
VRK3-203ENST00000424804 TAS1R2Q8TE23 839 aa13.68□□□□□ -0.22
VRK3-203ENST00000424804 ACOX2Q99424 681 aa13.68□□□□□ -0.22
VRK3-203ENST00000424804 FBXO10Q9UK96 956 aa13.68□□□□□ -0.22
VRK3-203ENST00000424804 AKAP13Q12802 2813 aa13.68□□□□□ -0.22
VRK3-203ENST00000424804 WDFY3Q8IZQ1 3526 aa13.68□□□□□ -0.22
VRK3-203ENST00000424804 ATP8B3O60423 1300 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 PCDH15Q96QU1 1955 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 BICDL2A1A5D9 508 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.67□□□□□ -0.22
VRK3-203ENST00000424804 PPP1R3GB7ZBB8 358 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 PRRT4C9JH25 899 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 GOLGA6L22H0YM25 854 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 MDM4O15151 490 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 SLC16A3O15427 465 aaKnown RBP13.67□□□□□ -0.22
VRK3-203ENST00000424804 CYP26A1O43174 497 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 STX10O60499 249 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 CILPO75339 1184 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 IRF1P10914 325 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 GABRG2P18507 467 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 CD58P19256 250 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 PAK1Q13153 545 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 ST3GAL2Q16842 350 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 EOGTQ5NDL2 527 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 EGFLAMQ63HQ2 1017 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 KRT39Q6A163 491 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 PSAPL1Q6NUJ1 521 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 TMEFF1Q8IYR6 380 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 ZNF276Q8N554 614 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 KCNV2Q8TDN2 545 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 SEMA4DQ92854 862 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 CYFIP2Q96F07 1278 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 NUP62CLQ9H1M0 184 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 CLSTN2Q9H4D0 955 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 TMEM8AQ9HCN3 771 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.67□□□□□ -0.22
VRK3-203ENST00000424804 MARK1Q9P0L2 795 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 KIAA1468Q9P260 1216 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 ARMCX3Q9UH62 379 aaPredicted RBP13.67□□□□□ -0.22
VRK3-203ENST00000424804 EVLQ9UI08 416 aaPredicted RBP13.67□□□□□ -0.22
VRK3-203ENST00000424804 NUDT5Q9UKK9 219 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 ANGPTL2Q9UKU9 493 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 SH3BP1Q9Y3L3 701 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 USP3Q9Y6I4 520 aa13.67□□□□□ -0.22
VRK3-203ENST00000424804 ZZEF1O43149 2961 aa13.66□□□□□ -0.22
VRK3-203ENST00000424804 A0A1W2PQH9 124 aa13.66□□□□□ -0.22
VRK3-203ENST00000424804 TCRBV21S2A2A0A5A6 115 aa13.66□□□□□ -0.22
VRK3-203ENST00000424804 TBC1D3BA6NDS4 549 aa13.66□□□□□ -0.22
VRK3-203ENST00000424804 KHNYNO15037 678 aaKnown RBP13.66□□□□□ -0.22
VRK3-203ENST00000424804 CACNG3O60359 315 aa13.66□□□□□ -0.22
VRK3-203ENST00000424804 KLKB1P03952 638 aa13.66□□□□□ -0.22
VRK3-203ENST00000424804 ADORA2BP29275 332 aa13.66□□□□□ -0.22
VRK3-203ENST00000424804 DHPSP49366 369 aaPredicted RBP13.66□□□□□ -0.22
VRK3-203ENST00000424804 KIF11P52732 1056 aa13.66□□□□□ -0.22
VRK3-203ENST00000424804 KIAA1211LQ6NV74 962 aa13.66□□□□□ -0.22
VRK3-203ENST00000424804 KLHDC10Q6PID8 442 aa13.66□□□□□ -0.22
VRK3-203ENST00000424804 TOGARAM2Q6ZUX3 1019 aa13.66□□□□□ -0.22
VRK3-203ENST00000424804 CYP2U1Q7Z449 544 aa13.66□□□□□ -0.22
VRK3-203ENST00000424804 TTC30AQ86WT1 665 aa13.66□□□□□ -0.22
VRK3-203ENST00000424804 HMGB4Q8WW32 186 aa13.66□□□□□ -0.22
VRK3-203ENST00000424804 PIGKQ92643 395 aa13.66□□□□□ -0.22
VRK3-203ENST00000424804 TMEM121BQ9BXQ6 578 aaPredicted RBP13.66□□□□□ -0.22
VRK3-203ENST00000424804 FBXO44Q9H4M3 255 aa13.66□□□□□ -0.22
VRK3-203ENST00000424804 CYP3A43Q9HB55 503 aa13.66□□□□□ -0.22
VRK3-203ENST00000424804 PNPLA8Q9NP80 782 aa13.66□□□□□ -0.22
VRK3-203ENST00000424804 POLMQ9NP87 494 aaPredicted RBP13.66□□□□□ -0.22
VRK3-203ENST00000424804 TLR8Q9NR97 1041 aaKnown RBP13.66□□□□□ -0.22
VRK3-203ENST00000424804 LMBRD1Q9NUN5 540 aa13.66□□□□□ -0.22
VRK3-203ENST00000424804 DEC1Q9P2X7 70 aa13.66□□□□□ -0.22
VRK3-203ENST00000424804 ALDH1A2O94788 518 aa13.65□□□□□ -0.22
VRK3-203ENST00000424804 TOP3BO95985 862 aaKnown RBP13.65□□□□□ -0.22
VRK3-203ENST00000424804 FAM200BP0CF97 657 aa13.65□□□□□ -0.22
VRK3-203ENST00000424804 ACO1P21399 889 aaKnown RBP13.65□□□□□ -0.22
VRK3-203ENST00000424804 KCNA4P22459 653 aa13.65□□□□□ -0.22
VRK3-203ENST00000424804 ATP5C1P36542 298 aaKnown RBP13.65□□□□□ -0.22
VRK3-203ENST00000424804 WASP42768 502 aa13.65□□□□□ -0.22
VRK3-203ENST00000424804 ENPEPQ07075 957 aa13.65□□□□□ -0.22
VRK3-203ENST00000424804 LRMPQ12912 555 aa13.65□□□□□ -0.22
VRK3-203ENST00000424804 TPD52L1Q16890 204 aaPredicted RBP13.65□□□□□ -0.22
VRK3-203ENST00000424804 ANO4Q32M45 955 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms