RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 ACOX2Q99424 681 aa16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 CDC6Q99741 560 aa16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 BBS2Q9BXC9 721 aa16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 KLF16Q9BXK1 252 aaPredicted RBP16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 TNMDQ9H2S6 317 aa16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 TLR8Q9NR97 1041 aaKnown RBP16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 CGNQ9P2M7 1197 aaKnown RBP16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 CHORDC1Q9UHD1 332 aaPredicted RBP16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 PRRT4C9JH25 899 aa16.45■□□□□ 0.22
RPUSD3-204ENST00000424438 E9PAM4 449 aa16.45■□□□□ 0.22
RPUSD3-204ENST00000424438 OXTRP30559 389 aa16.45■□□□□ 0.22
RPUSD3-204ENST00000424438 HOXD13P35453 343 aa16.45■□□□□ 0.22
RPUSD3-204ENST00000424438 AP3M2P53677 418 aa16.45■□□□□ 0.22
RPUSD3-204ENST00000424438 CYP24A1Q07973 514 aa16.45■□□□□ 0.22
RPUSD3-204ENST00000424438 C12orf56Q8IXR9 622 aa16.45■□□□□ 0.22
RPUSD3-204ENST00000424438 ITM2CQ9NQX7 267 aa16.45■□□□□ 0.22
RPUSD3-204ENST00000424438 AGPAT3Q9NRZ7 376 aa16.45■□□□□ 0.22
RPUSD3-204ENST00000424438 GMIPQ9P107 970 aa16.45■□□□□ 0.22
RPUSD3-204ENST00000424438 LSM7Q9UK45 103 aaKnown RBP16.45■□□□□ 0.22
RPUSD3-204ENST00000424438 CLIC4Q9Y696 253 aa16.45■□□□□ 0.22
RPUSD3-204ENST00000424438 CELSR3Q9NYQ7 3312 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 NEDD8-MDP1E9PL57 170 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 TK2O00142 265 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 TRIM24O15164 1050 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 FLRT2O43155 660 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 TGFB1I1O43294 461 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 DLATP10515 647 aaKnown RBP16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 PDCP20941 246 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 WASP42768 502 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 DGKGP49619 791 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 IFRD2Q12894 506 aaPredicted RBP16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 TRPC3Q13507 836 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 STARD3Q14849 445 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 Q6ZNB5 142 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 SLCO6A1Q86UG4 719 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 SCUBE3Q8IX30 993 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 FUKQ8N0W3 1084 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 GALNT15Q8N3T1 639 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 PNPLA1Q8N8W4 532 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 XXYLT1Q8NBI6 393 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 SPRYD3Q8NCJ5 442 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 WBP2Q969T9 261 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 NACA2Q9H009 215 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 GZF1Q9H116 711 aaPredicted RBP16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 CUEDC2Q9H467 287 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 PNPLA8Q9NP80 782 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 KBTBD4Q9NVX7 518 aa16.44■□□□□ 0.22
RPUSD3-204ENST00000424438 METTL12A8MUP2 240 aa16.43■□□□□ 0.22
RPUSD3-204ENST00000424438 TULP1O00294 542 aaPredicted RBP16.43■□□□□ 0.22
RPUSD3-204ENST00000424438 PRB1P04280 392 aa16.43■□□□□ 0.22
RPUSD3-204ENST00000424438 ACO1P21399 889 aaKnown RBP16.43■□□□□ 0.22
RPUSD3-204ENST00000424438 ATP5C1P36542 298 aaKnown RBP16.43■□□□□ 0.22
RPUSD3-204ENST00000424438 MATKP42679 507 aa16.43■□□□□ 0.22
RPUSD3-204ENST00000424438 MYL6P60660 151 aa16.43■□□□□ 0.22
RPUSD3-204ENST00000424438 CLDN10P78369 228 aa16.43■□□□□ 0.22
RPUSD3-204ENST00000424438 ZNF605Q86T29 641 aa16.43■□□□□ 0.22
RPUSD3-204ENST00000424438 CRYBG2Q8N1P7 616 aa16.43■□□□□ 0.22
RPUSD3-204ENST00000424438 ZMIZ2Q8NF64 920 aa16.43■□□□□ 0.22
RPUSD3-204ENST00000424438 C1orf216Q8TAB5 229 aa16.43■□□□□ 0.22
RPUSD3-204ENST00000424438 SLC39A7Q92504 469 aa16.43■□□□□ 0.22
RPUSD3-204ENST00000424438 TOE1Q96GM8 510 aaKnown RBP16.43■□□□□ 0.22
RPUSD3-204ENST00000424438 CLIC6Q96NY7 704 aa16.43■□□□□ 0.22
RPUSD3-204ENST00000424438 TRIM9Q9C026 710 aa16.43■□□□□ 0.22
RPUSD3-204ENST00000424438 OSGEPQ9NPF4 335 aa16.43■□□□□ 0.22
RPUSD3-204ENST00000424438 TOR4AQ9NXH8 423 aa16.43■□□□□ 0.22
RPUSD3-204ENST00000424438 THAP10Q9P2Z0 257 aaPredicted RBP16.43■□□□□ 0.22
RPUSD3-204ENST00000424438 SCML2Q9UQR0 700 aa16.43■□□□□ 0.22
RPUSD3-204ENST00000424438 ZNF510Q9Y2H8 683 aa16.43■□□□□ 0.22
RPUSD3-204ENST00000424438 A0A087WV48 116 aa16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 A0A087X0B3 334 aa16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 MEI4A8MW99 385 aa16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 AP1G2O75843 785 aa16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 CD2BP2O95400 341 aaKnown RBP16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 PENKP01210 267 aaPredicted RBP16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 NCAM1P13591 858 aa16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 SLC39A14Q15043 492 aa16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 EIF4HQ15056 248 aaKnown RBP16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 BMT2Q1RMZ1 405 aa16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 FUT11Q495W5 492 aa16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 C8orf34Q49A92 452 aa16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 KIAA1324Q6UXG2 1013 aaKnown RBP16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 UNC93AQ86WB7 457 aa16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 TMEM174Q8WUU8 243 aa16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 ZNF516Q92618 1163 aa16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 SMOQ99835 787 aa16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 PRDM16Q9HAZ2 1276 aa16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 TM7SF3Q9NS93 570 aa16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 KRT82Q9NSB4 513 aa16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 NXF1Q9UBU9 619 aaKnown RBP16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 STON1Q9Y6Q2 735 aa16.42■□□□□ 0.22
RPUSD3-204ENST00000424438 ZNF462Q96JM2 2506 aa16.41■□□□□ 0.22
RPUSD3-204ENST00000424438 BCAT2O15382 392 aaPredicted RBP16.41■□□□□ 0.22
RPUSD3-204ENST00000424438 CILPO75339 1184 aa16.41■□□□□ 0.22
RPUSD3-204ENST00000424438 PLA2G4AP47712 749 aa16.41■□□□□ 0.22
RPUSD3-204ENST00000424438 PSEN1P49768 467 aa16.41■□□□□ 0.22
RPUSD3-204ENST00000424438 AMPD3Q01432 767 aa16.41■□□□□ 0.22
RPUSD3-204ENST00000424438 EHHADHQ08426 723 aa16.41■□□□□ 0.22
RPUSD3-204ENST00000424438 ZNF667Q5HYK9 610 aa16.41■□□□□ 0.22
RPUSD3-204ENST00000424438 FAM26FQ5R3K3 315 aa16.41■□□□□ 0.22
RPUSD3-204ENST00000424438 UCMAQ8WVF2 138 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms