RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 TEX28O15482 410 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 SLC7A4O43246 635 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 TIPRLO75663 272 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 CD4P01730 458 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 MT-ND3P03897 115 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 TROVE2P10155 538 aaKnown RBP eCLIP3.09□□□□□ -1.92
PMS1-209ENST00000424059 ATP6V1B1P15313 513 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 FDXRP22570 491 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 CTSSP25774 331 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 CSTF2P33240 577 aaKnown RBP eCLIP3.09□□□□□ -1.92
PMS1-209ENST00000424059 EVCP57679 992 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 CLRN1P58418 232 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 NHLH1Q02575 133 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 RUNX1T1Q06455 604 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 C15orf59Q2T9L4 293 aaPredicted RBP3.09□□□□□ -1.92
PMS1-209ENST00000424059 MST1LQ2TV78 715 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 KRBOX4Q5JUW0 171 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 TPGS2Q68CL5 300 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 CNSTQ6PJW8 725 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 LRRC31Q6UY01 552 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 PPP1R42Q7Z4L9 355 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 SLC9B2Q86UD5 537 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 CMTR2Q8IYT2 770 aaKnown RBP3.09□□□□□ -1.92
PMS1-209ENST00000424059 CBARPQ8N350 705 aaPredicted RBP3.09□□□□□ -1.92
PMS1-209ENST00000424059 MAGEB6Q8N7X4 407 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 SIMC1Q8NDZ2 872 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 PJA1Q8NG27 643 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 GOT1L1Q8NHS2 421 aaPredicted RBP3.09□□□□□ -1.92
PMS1-209ENST00000424059 PPP1R14BQ96C90 147 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 INTS12Q96CB8 462 aaKnown RBP3.09□□□□□ -1.92
PMS1-209ENST00000424059 BOD1Q96IK1 185 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 MAELQ96JY0 434 aaKnown RBP3.09□□□□□ -1.92
PMS1-209ENST00000424059 PPM1MQ96MI6 270 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 CTAGE1Q96RT6 745 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 ELAC2Q9BQ52 826 aaKnown RBP3.09□□□□□ -1.92
PMS1-209ENST00000424059 DUSP26Q9BV47 211 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 SARGQ9BW04 601 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 R3HDMLQ9H3Y0 253 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 PANK3Q9H999 370 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 VPS37BQ9H9H4 285 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 GRPEL1Q9HAV7 217 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 HELLSQ9NRZ9 838 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 TMEM74BQ9NUR3 256 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 NKIRAS2Q9NYR9 191 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 FAM30AQ9NZY2 134 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 LCMT1Q9UIC8 334 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 NOC2LQ9Y3T9 749 aaKnown RBP3.09□□□□□ -1.92
PMS1-209ENST00000424059 ZNF711Q9Y462 761 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 SNX8Q9Y5X2 465 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 A0A1B0GVC2 190 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 GOLGA6L4A6NEF3 574 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 APAF1O14727 1248 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 ASAP2O43150 1006 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 SOCS5O75159 536 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 ULK1O75385 1050 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 SPDEFO95238 335 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 POP4O95707 220 aaKnown RBP3.08□□□□□ -1.92
PMS1-209ENST00000424059 CAVIN2O95810 425 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 RPS6KB1P23443 525 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 PRKAR1BP31321 381 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 ADCYAP1R1P41586 468 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 EPS15P42566 896 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 ATP5OP48047 213 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 CCNA1P78396 465 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 MPP1Q00013 466 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 FOXI1Q12951 378 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 RESTQ13127 1097 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 GPS2Q13227 327 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 SGCGQ13326 291 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 PICALMQ13492 652 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 CUL4BQ13620 913 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 TP53BP2Q13625 1128 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 PPA1Q15181 289 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 PCBP1Q15365 356 aaKnown RBP eCLIP3.08□□□□□ -1.92
PMS1-209ENST00000424059 CLUL1Q15846 466 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 MAJINQ3KP22 176 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 BEND6Q5SZJ8 279 aaPredicted RBP3.08□□□□□ -1.92
PMS1-209ENST00000424059 ATXN7L2Q5T6C5 722 aaPredicted RBP3.08□□□□□ -1.92
PMS1-209ENST00000424059 FAM102BQ5T8I3 360 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 OTUD7BQ6GQQ9 843 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 XRRA1Q6P2D8 792 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 NEK5Q6P3R8 708 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 ANGPTL8Q6UXH0 198 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 LDHAL6AQ6ZMR3 332 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 MFSD6Q6ZSS7 791 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 IKBIPQ70UQ0 350 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 FASTKD5Q7L8L6 764 aaKnown RBP3.08□□□□□ -1.92
PMS1-209ENST00000424059 ZNF572Q7Z3I7 529 aaPredicted RBP3.08□□□□□ -1.92
PMS1-209ENST00000424059 MRPL10Q7Z7H8 261 aaKnown RBP3.08□□□□□ -1.92
PMS1-209ENST00000424059 SPATA24Q86W54 205 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 GALNT13Q8IUC8 556 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 CCDC83Q8IWF9 413 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 SYTL1Q8IYJ3 562 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 NRSN1Q8IZ57 195 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 TRMT2AQ8IZ69 625 aaKnown RBP3.08□□□□□ -1.92
PMS1-209ENST00000424059 SPARTQ8N0X7 666 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 ZNF619Q8N2I2 560 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 TXLNBQ8N3L3 684 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 TMEM57Q8N5G2 664 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 FAM98AQ8NCA5 519 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms